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Sun, Zenan

https://orcid.org/0000-0003-1577-874X

Mayo Clinic

The University of Texas Health Science Center at Houston

Citations 2

RefAI: a GPT-powered retrieval-augmented generative tool for biomedical literature recommendation and summarization
Li, Yiming , Zhao, Jeff, Li, Manqi , Dang, Yifang , Li, Jianfu , Sun, Zenan , Hussein, Usama, Wen, Jianguo, Li, Shenduo , Hu, Xinyue , Yang, Daowei, Feng, Jingna , Li, Zehan , He, Jianping , Tao, Wei , Lou, Yanyan , Sun, Zenan , Abdelhameed, Ahmed M, Duan, Tiehang , Li, Fang , Tao, Cui , Dang, Yifang , Li, Yiming , Yu, Evan Y , Wen, Jianguo, Abdelhameed, Ahmed , Mai, Junhua , Yu, Yue , Li, Fang , Tao, Cui

Journal of the American Medical Informatics Association | May 21, 2024 | Volume: 31 | Issue: 9 | Pages: 2030-2039

10.1093/jamia/ocae129 Get It

Abstract Objectives Precise literature recommendation and summarization are crucial for biomedical professionals. While the latest iteration of generative pretrained transformer (GPT) incorporates 2 distinct modes—real-time search and pretrained model utilization—it encounters challenges in dealing with these tasks. Specifically, the real-time search can pinpoint some relevant articles but occasionally provides fabricated papers, whereas the pretrained model excels in generating well-structured summaries but struggles to cite specific sources. In response, this study introduces RefAI, an innovative retrieval-augmented generative tool designed to synergize the strengths of large language models (LLMs) while overcoming their limitations. Materials and Methods RefAI utilized PubMed for systematic literature retrieval, employed a novel multivariable algorithm for article recommendation, and leveraged GPT-4 turbo for summarization. Ten queries under 2 prevalent topics (“cancer immunotherapy and target therapy” and “LLMs in medicine”) were chosen as use cases and 3 established counterparts (ChatGPT-4, ScholarAI, and Gemini) as our baselines. The evaluation was conducted by 10 domain experts through standard statistical analyses for performance comparison. Results The overall performance of RefAI surpassed that of the baselines across 5 evaluated dimensions—relevance and quality for literature recommendation, accuracy, comprehensiveness, and reference integration for summarization, with the majority exhibiting statistically significant improvements (P-values <.05). Discussion RefAI demonstrated substantial improvements in literature recommendation and summarization over existing tools, addressing issues like fabricated papers, metadata inaccuracies, restricted recommendations, and poor reference integration. Conclusion By augmenting LLM with external resources and a novel ranking algorithm, RefAI is uniquely capable of recommending high-quality literature and generating well-structured summaries, holding the potential to meet the critical needs of biomedical professionals in navigating and synthesizing vast amounts of scientific literature.
Dynamic Prognosis Prediction for Patients on DAPT After Drug‐Eluting Stent Implantation: Model Development and Validation
Li, Fang , Rasmy, Laila , Xiang, Yang , Feng, Jingna , Abdelhameed, Ahmed , Hu, Xinyue , Sun, Zenan , Aguilar, David , Dhoble, Abhijeet , Du, Jingcheng , Wang, Qing , Zhang, Xinyuan , Xie, Ziqian , Nian, Yi , He, Jianping , Zhou, Yujia , Li, Jianfu , Prosperi, Mattia , Bian, Jiang , Zhi, Degui , Niu, Shuteng , Dang, Yifang , Zhang, Xinyuan , Xie, Ziqian , Nian, Yi , He, JianPing , Zhou, Yujia , Li, Jianfu , Prosperi, Mattia , Bian, Jiang , Zhi, Degui , Tao, Cui , Sun, Zenan , Li, Fang , Niu, Shuteng , Dang, Yifang , Tao, Cui

Journal of the American Heart Association | January 31, 2024 | Volume: 13 | Issue: 3 | Pages: No page available

10.1161/jaha.123.029900 Get It

Background The rapid evolution of artificial intelligence (AI) in conjunction with recent updates in dual antiplatelet therapy (DAPT) management guidelines emphasizes the necessity for innovative models to predict ischemic or bleeding events after drug‐eluting stent implantation. Leveraging AI for dynamic prediction has the potential to revolutionize risk stratification and provide personalized decision support for DAPT management. Methods and Results We developed and validated a new AI‐based pipeline using retrospective data of drug‐eluting stent‐treated patients, sourced from the Cerner Health Facts data set (n=98 236) and Optum's de‐identified Clinformatics Data Mart Database (n=9978). The 36 months following drug‐eluting stent implantation were designated as our primary forecasting interval, further segmented into 6 sequential prediction windows. We evaluated 5 distinct AI algorithms for their precision in predicting ischemic and bleeding risks. Model discriminative accuracy was assessed using the area under the receiver operating characteristic curve, among other metrics. The weighted light gradient boosting machine stood out as the preeminent model, thus earning its place as our AI‐DAPT model. The AI‐DAPT demonstrated peak accuracy in the 30 to 36 months window, charting an area under the receiver operating characteristic curve of 90% [95% CI, 88%–92%] for ischemia and 84% [95% CI, 82%–87%] for bleeding predictions. Conclusions Our AI‐DAPT excels in formulating iterative, refined dynamic predictions by assimilating ongoing updates from patients' clinical profiles, holding value as a novel smart clinical tool to facilitate optimal DAPT duration management with high accuracy and adaptability.