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Bera, Chinmay

https://orcid.org/0000-0002-8506-8447

Mayo Clinic

University of Toronto

Citations 2

Salivary microbiome and serum metabolomics add to clinical biomarkers to predict 6-month hospitalizations in a multicenter cirrhosis outpatient cohort
Bajaj, Jasmohan S. , Reddy, K. Rajender , O’Leary, Jacqueline G. , García–Tsao, Guadalupe , Vargas, Hugo E. , Kamath, Patrick S. , Biggins, Scott W. , Vutien, Phillip, Shaw, Jawaid , Miro, Ana Teresa Limon, Bera, Chinmay , McGinley, Joseph , Sikaroodi, Masoumeh , Bush, Brian J., Gillevet, Patrick M. , Vargas, Hugo E , Bera, Chinmay , Tandon, Puneeta , Lai, Jennifer C. , Wong, Florence , Miro, Ana Teresa Limon, BUSH, BRIAN J. , Thacker, Leroy R.

Hepatology | July 9, 2025 | Volume: 83 | Issue: 6 | Pages: 1483-1494

10.1097/hep.0000000000001462 Get It

Background and Aims: Prognosticating outcomes such as hospitalizations in outpatients with cirrhosis is challenging, especially with changing etiologies and demographics. This study aims to determine the impact of multi-omic strategies on outcome prediction. Approach and Results: NACSELD3 enrolls outpatients with cirrhosis with controlled/eradicated etiologies from 10 centers and follows them systematically. At baseline, clinical/demographic and cirrhosis details were recorded and saliva and serum samples were collected for microbiome and metabolome analysis, respectively. Multi-omic bioinformatic studies to determine the interaction of microbiota and metabolites with the clinical prediction of 6-month hospitalizations were performed. Five hundred sixty-five patients (60.2 y, 68% men, 35% alcohol, 33% metabolic dysfunction-associated steatohepatitis, 21%, eradicated HCV with MELD 3.0 12) were enrolled. One hundred sixty-three (29%) required 6-month hospitalizations; most (75%) were liver-related. Those hospitalized had worse cirrhosis severity and comorbidity indices but similar demographics and oral health variables. Salivary microbiome alpha-diversity was lower (1.96±0.48 vs. 2.09±0.45, p =0.018) with greater pathobionts ( Streptococcus , Treponema, Enterococcaceae) and lower commensal genhospitalized/noera ( Veillonella, Prevotella, Haemophilus , Lachnospiraceae spp) at baseline. Serum metabolomics showed significant separation at baseline between hospitalized/non-hospitalized patients using supervised analyses with microbial-origin (phenyllactate, secondary bile acids, indoles), choline moieties, and polyamine/GABA (3-ureidopropionate/spermidine) metabolites being most prominent. Area under the curve using random forest for clinical, microbial, and metabolomic variables was higher than that of these individually. Latent factor analysis showed clinical variables (MELD 3.0, hemoglobin, and albumin) with the greatest impact, followed by salivary microbiota and then serum microbiome for hospitalization prediction. Conclusions: In a multicenter North American outpatient cirrhosis cohort with controlled etiologies, serum metabolomics and salivary microbiome add to clinical variables to prognosticate 6-month hospitalization.
Predictors of Respiratory Failure Development in a Multicenter Cohort of Inpatients With Cirrhosis
Bajaj, Jasmohan S. , Kamath, Patrick S. , Reddy, K. Rajender , Keaveny, Andrew P. , Duarte‐Rojo, Andrés , Kappus, Matthew R. , Verna, Elizabeth C. , Biggins, Scott W. , Vargas, Hugo E. , Shaw, Jawaid , Dahiya, Monica , Filipek, Natalia, Wegermann, Kara , Cabello, Ricardo , Bera, Chinmay , Thuluvath, Paul J. , Keaveny, Andrew P , Duarte-Rojo, Andres , Kappus, Matthew R , Albhaisi, Somaya , Fallahzadeh, Mohammad Amin , Wegermann, Kara , Bera, Chinmay , BUSH, BRIAN J. , Thacker, Leroy R , Wong, Florence , Vargas, Hugo E , Asrani, Sumeet K. , Tandon, Puneeta , Albhaisi, Somaya , Thacker, Leroy R. , Wong, Florence

American Journal of Gastroenterology | November 8, 2023 | Volume: 119 | Issue: 4 | Pages: 712-718

10.14309/ajg.0000000000002574 Get It

INTRODUCTION: Hospitalized patients with cirrhosis can develop respiratory failure (RF), which is associated with a poor prognosis, but predisposing factors are unclear. METHODS: We prospectively enrolled a multicenter North American cirrhosis inpatient cohort and collected admission and in-hospital data (grading per European Association for the Study of Liver-Chronic Liver Failure scoring system, acute kidney injury [AKI], infections [admission/nosocomial], and albumin use) in an era when terlipressin was not available in North America. Multivariable regression to predict RF was performed using only admission day and in-hospital events occurring before RF. RESULTS: A total of 511 patients from 14 sites (median age 57 years, admission model for end-stage liver disease [MELD]-Na 23) were enrolled: RF developed in 15%; AKI occurred in 24%; and 11% developed nosocomial infections (NI). At admission, patients who developed RF had higher MELD-Na, gastrointestinal (GI) bleeding/AKI-related admission, and prior infections/ascites. During hospitalization, RF developers had higher NI (especially respiratory), albumin use, and other organ failures. RF was higher in patients receiving albumin (83% vs 59%, P < 0.0001) with increasing doses (269.5 ± 210.5 vs 208.6 ± 186.1 g, P = 0.01) regardless of indication. Admission for AKI, GI bleeding, and high MELD-Na predicted RF. Using all variables, NI (odds ratio [OR] = 4.02, P = 0.0004), GI bleeding (OR = 3.1, P = 0.002), albumin use (OR = 2.93, P = 0.01), AKI (OR = 3.26, P = 0.008), and circulatory failure (OR = 3.73, P = 0.002) were associated with RF risk. DISCUSSION: In a multicenter inpatient cirrhosis study of patients not exposed to terlipressin, 15% of patients developed RF. RF risk was highest in those admitted with AKI, those who had GI bleeding on admission, and those who developed NI and other organ failures or received albumin during their hospital course. Careful volume monitoring and preventing nosocomial respiratory infections and renal or circulatory failures could reduce this risk.