G protein-coupled receptors (GPCRs) are among the most common drug targets, with numerous agonists and antagonists approved for clinical use. More recently, it has been appreciated that drugs can also modulate the action of natural agonists of these receptors, thus providing unique clinical advantages. Here, we describe the identification and characterization of a small molecule positive allosteric modulator (PAM) of secretin action at the class B G protein-coupled secretin receptor. This phenyl(trifluoromethyl)-pyrimidine can occupy the secretin receptor without stimulating its internalization, yet priming it to enhance both the potency and efficacy of the action of natural secretin. This is also shown to exhibit its effects on cells expressing low numbers of these receptors, without enhancing the effects of other structurally related hormones acting at other class B GPCRs. The mechanism responsible for this PAM effect is the slowing of the off-rate of receptor-bound secretin. This compound can serve as a lead to the development of other drugs that enhance the action of natural endogenous secretin and can be utilized to explore the potential therapeutic utility of such compounds.
Mechanism of Action and Structure–Activity Relationships of Tetracyclic Small Molecules Acting as Universal Positive Allosteric Modulators of the Cholecystokinin Receptor
As part of an ongoing effort to develop a drug targeting the type 1 cholecystokinin receptor (CCK1R) to help prevent and/or treat obesity, we recently performed a high throughput screening effort of small molecules seeking candidates that enhanced the action of the natural agonist, CCK, thus acting as positive allosteric modulators without exhibiting intrinsic agonist action. Such probes would be expected to act in a temporally finite way to enhance CCK action to induce satiety during and after a meal and potentially even modulate activity at the CCK1R in a high cholesterol environment present in some obese patients. The current work focuses on the best scaffold, representing tetracyclic molecules identified through high throughput screening we previously reported. Extensive characterization of the two top “hits” from the previous effort demonstrated them to fulfill the desired pharmacologic profile. We undertook analog-by-catalog expansion of this scaffold using 65 commercially available analogs. In this effort, we were able to eliminate an off-target effect observed for this scaffold while retaining its activity as a positive allosteric modulator of CCK1R in both normal and high cholesterol membrane environments. These insights should be useful in the rational medicinal chemical enhancement of this scaffold and in the future development of candidates to advance to pre-clinical proof-of-concept and to clinical trials.
Discovery of Small Molecule Modulators targeting Secretin Receptors
Class B G protein‐coupled receptors (GPCRs) are a highly important group of therapeutic targets with strong physiologic implications in cardiovascular, metabolic, or gastrointestinal systems. Endogenously activated by moderate‐length peptide hormones, class B GPCRs entertain a complex binding mechanism to induce stimulatory signaling processes. The secretin receptor (SCTR) is a prototypical member of this receptor family, having clinical relevance in multiple diseases including heart failure, digestive disorders, diabetes and obesity. [1‐4] However, its endogenous ligand secretin and peptide‐based analogs are the only ligands known to interact with SCTRs, likely due to challenges in class B GPCR drug discovery [5]. To find orally available therapeutic leads targeting this “undruggable” receptor, we focused on identifying positive allosteric modulators (PAMs), which act via structurally distinct binding pockets and potentiate hormonal signaling of native agonists. Thus, we developed a testing funnel tailored to discover SCTR small molecule modulators. After screening a 12,000‐compound library with a unique primary assay that used a mixture of stimulators, we identified three structurally related scaffolds (A‐C) enhancing peptidic SCTR activation [5]. Applying a comprehensive toolbox with binding and functional assays, we studied structure‐activity relationships of a well‐considered set of commercially available analogs incorporating these three scaffolds. Our investigations afforded an optimized analog B2, which showed substantial positive cooperativity to low‐potent peptide agonists and significantly decelerated secretin dissociation. Due to the innate electrophilicity of scaffold set A, we recognized a structural similarity to PAMs acting on glucagon‐like peptide‐1 receptor (GLP‐1R), a prominent member of class B GPCR family. We further demonstrated that a subset of SCTR PAMs was able to augment not only SCTR signaling but also GLP‐1R functions. A recent study described that dual activation of SCTRs and GLP‐1Rs was benefiting glucose homeostasis and appetite regulation while avoiding proliferative effects on pancreas mass [6]. Determining cooperativity between PAMs and selected orthosteric peptides, we established distinct selectivity and probe dependency profiles. To decipher reversible and covalent mechanisms‐of‐action as well as potential binding sites of novel PAMs, we conducted glutathione reactivity, cAMP‐washout and receptor mutational studies. [7] To conclude, we discovered a unique class of SCTR modulators providing useful pharmacologic tools to study SCTR‐ or GLP‐1R‐specific activation pathways and explore novel allosteric binding sites with potential to instigate the development of first‐in‐class therapeutics for treating comorbid conditions obesity and diabetes. [7] References [1] Annu Rev Pharmacol Toxicol, 2020 , 60 , 89‐107; [2] Trends in Biochemical Sciences, 2017 , 12 , 946‐960; [3] Experimental Physiology, 2013 , 5 , 973‐987; [4] Current Neuropharmacology, 2007 , 3 , 168‐179; [5] SLAS Discovery, 2021 , 26 , 1‐16; [6] Journal of Peptide Science, 2017 , 12 , 845‐854; [7] submitted to Biochemical Pharmacology 2021 .
Identification and Characterization of Dual‐Acting Small Molecule Modulators targeting Secretin Receptors
The Secretin receptor (SCTR) has been cloned as the first member of class B G protein‐coupled receptors (GPCRs) , giving rise to this highly important group of therapeutic targets, which are crucial for hormonal homeostasis . Despite the wide recognition of their functional importance, the development of potent small molecule ligands for Class B GPCRs remained challenging . To date, no ligands other than secretin peptide and its close analogs are known to interact with SCTRs, despite its therapeutic relevance in multiple diseases, such as heart failure, obesity, diabetes and cancer . In order to enhance our chances for discovering orally bioavailable drug candidates targeting an ‚undruggable’ class B GPCR, we focused our efforts on the identification of positive allosteric modulators (PAMs), which are likely to interact via structurally distinct binding sites and potentiate effects of native hormones and neurotransmitters . We developed a comprehensive tool box with robust high‐throughput screening and lead characterization/optimization assays capable of identifying and characterizing biologically relevant SCTR small molecule modulators. The dominant physiological coupling of SCTRs occurs via Gs proteins. Hence, we utilized this signaling mechanism to establish diverse cAMP accumulation assays suitable for simultaneous detection of PAMs modulating secretin and its potential metabolites. We also established a TR‐FRET based binding assay to further characterize potential PAMs with respect to their kinetic properties. Since functional selectivity has been proven to be therapeutically relevant for this family of membrane proteins, we additionally designed assays to investigate signaling mechanisms beyond Gs protein coupling, such as β‐arrestin recruitment, receptor internalization and calcium flux. High‐throughput screening (HTS) of a 360,000 compound library provided promising sets of hits, which have been further investigated regarding their allosteric activity and mechanism of action. We identified three related scaffolds with significant PAM activity at SCTRs. Selectivity studies revealed that this specific set of compounds demonstrated positive modulation not only on SCTRs but also on GLP‐1Rs (glucagon‐like peptide 1 receptors). Interestingly, dual activation of SCTRs and GLP‐1Rs has been shown to be beneficial for appetite regulation and glucose homeostasis without having proliferative effects on exocrine or total pancreas mass . To conclude, HTS and the development of a diverse panel of binding and functional assays has led to the discovery of small molecules with a unique dual‐acting pharmacological profile and potential to serve as starting points for developing first‐in‐class drug candidates for the treatment of comorbid conditions obesity and diabetes. Support or Funding Information Funding: NHLBI award 5R01HL133501