Citations

Showing 10 of 108036 citations.

Comparison of the Life Cycles of Genetically Distant Species C and Species D Human Adenoviruses Ad6 and Ad26 in Human Cells
Turner, Mallory A., Middha, Sumit , Hofherr, Sean, Barry, Michael A. , Hofherr, Sean E, Barry, Michael A

Mayo Clinic

Journal of Virology | October 1, 2015 | Volume: 89 | Issue: 24 | Pages: 12401-12417

10.1128/jvi.01534-15 | PMID 26423951 Get It

ABSTRACT Our understanding of adenovirus (Ad) biology is largely extrapolated from human species C Ad5. Most humans are immune to Ad5, so lower-seroprevalence viruses like human Ad6 and Ad26 are being tested as therapeutic vectors. Ad6 and Ad26 differ at the DNA level by 34%. To better understand how this might impact their biology, we examined the life cycle of the two viruses in human lung cells in vitro . Both viruses infected A549 cells with similar efficiencies, executed DNA replication with identical kinetics within 12 h, and began killing cells within 72 h. While Ad6-infected cells remained adherent until death, Ad26-infected cells detached within 12 h of infection but remained viable. Next-generation sequencing (NGS) of mRNA from infected cells demonstrated that viral transcripts constituted 1% of cellular mRNAs within 6 h and 8 to 16% within 12 h. Quantitative PCR and NGS revealed the activation of key early genes at 6 h and transition to late gene activation by 12 h by both viruses. There were marked differences in the balance of E1A and E1B activation by the two viruses and in the expression of E3 immune evasion mRNAs. Ad6 was markedly more effective at suppressing major histocompatibility complex class I (MHC I) display on the cell surface and in evading TRAIL-mediated apoptosis than was Ad26. These data demonstrate shared as well as divergent life cycles in these genetically distant human adenoviruses. An understanding of these differences expands the knowledge of alternative Ad species and may inform the selection of related Ads for therapeutic development. IMPORTANCE A burgeoning number of adenoviruses (Ads) are being harnessed as therapeutics, yet the biology of these viruses is generally extrapolated from Ad2 and Ad5. Here, we are the first to compare the transcriptional programs of two genetically distant Ads by mRNA next-generation sequencing (NGS). Species C Ad6 and Ad26 are being pursued as lower-seroprevalence Ad vectors but differ at the DNA level by 34%. Head-to-head comparison in human lung cells by NGS revealed that the two viruses generally conform to our general understanding of the Ad transcriptional program. However, fine mapping revealed subtle and strong differences in how these two viruses execute these programs, including differences in the balance of E1A and E1B mRNAs and in E3 immune evasion genes. This suggests that not all adenoviruses behave like Ad2 and Ad5 and that they may have unique strategies to infect cells and evade the immune system.
Effect of Vascular Endothelial Growth Factor Administration on Nerve Regeneration after Autologous Nerve Grafting
Lee, Joo‐Yup , Giusti, Guilherme , Friedrich, Patricia F. , Shin, Alexander Y. , Bishop, Allen T. , Shin, Alexander Y

Mayo Clinic

Journal of Reconstructive Microsurgery | September 30, 2015 | Volume: 32 | Issue: 03 | Pages: 183-188

10.1055/s-0035-1563709 | PMID 26422174 Get It

Lysyl Oxidase as a Serum Biomarker of Liver Fibrosis in Patients with Severe Obesity and Obstructive Sleep Apnea
Mesarwi, Omar A. , Shin, Mi‐Kyung , Drager, Luciano F. , Bevans‐Fonti, Shannon, Jun, Jonathan C. , Putcha, Nirupama , Lorenzi‐Filho, Geraldo , Schweitzer, Michael , Magnuson, Thomas, Lidor, Anne O. , Polotsky, Vsevolod Y. , Torbenson, Michael , Pedrosa, Rodrigo Pinto , Steele, Kimberley Eden , Schwartz, Alan R.

Mayo Clinic

Sleep | September 30, 2015 | Volume: 38 | Issue: 10 | Pages: 1583-1591

10.5665/sleep.5052 | PMID 26085300 Get It

Presentation, Endoscopic Management, and Significance of Hemostatic Clip Migration into the Lower Urinary Tract Following Radical Prostatectomy
Jaeger, Christopher , Cockerill, Patrick, Gettman, Matthew T., Tollefson, Matthew K. , Jaeger, Christopher D, Cockerill, Patrick A

Mayo Clinic

Journal of Laparoendoscopic & Advanced Surgical Techniques | September 30, 2015 | Volume: 25 | Issue: 10 | Pages: 800-803

10.1089/lap.2015.0054 | PMID 26421880 Get It

Abstract Objectives: Hemostatic clip migration into the lower urinary tract is a potential complication of radical prostatectomy that may cause symptoms, anxiety, and functional concern. Our objective was to evaluate initial presentation, endoscopic management, and outcomes of patients with hemostatic clip migration following radical prostatectomy. Patients and Methods: We retrospectively identified all patients with hemostatic clip migration at our institution from 1977 to 2012. Patient records were then reviewed to identify causative factors, presentation, and long-term functional outcomes. Results: Seventeen patients were identified with clip migration following radical prostatectomy. Eight (47%) patients had undergone open retropubic radical prostatectomy, and 9 (53%) had received robot-assisted radical prostatectomy. Hemostatic clip migration was diagnosed at a median of 8 (range, 1–252) months after prostatectomy. The majority of patients ( n = 16, 94%) were symptomatic upon the diagnosis of clip migration. Symptoms included irritative urinary symptoms ( n = 14, 82%), perineal pain ( n = 3, 18%), hematuria ( n = 2, 12%), and infection ( n = 2, 12%). Five (29%) had concomitant bladder neck contracture. Fifteen (88%) underwent successful endoscopic clip removal, whereas 2 (13%) patients required a repeat operation for recurrent clip erosion. With a median follow-up of 1.6 years, the majority ( n = 13, 87%) had complete symptom resolution after clip removal, although 2 patients had recurrent bladder neck contracture. Conclusions: Hemostatic clip migration after prostatectomy is often symptomatic with irritative voiding complaints, perineal pain, hematuria, infection, or bladder neck contracture. Fortunately, clips can be removed endoscopically with expected symptom resolution in the vast majority of patients.
Evaluation of the Use of Clinical Decision Support and Online Resources for Pharmacogenomics Education
Vitek, Carolyn R. Rohrer , Nicholson, Wayne T. , Schultz, Cloann G. , Rohrer Vitek, Carolyn R, Schultz, Cloann, Caraballo, Pedro J.

Mayo Clinic

Pharmacogenomics | September 30, 2015 | Volume: 16 | Issue: 14 | Pages: 1595-1603

10.2217/pgs.15.100 | PMID 26419532 Get It

Sex Steroid Hormone Levels May Not Explain Gender Differences in Development of Nephrolithiasis
Knoedler, John, Krambeck, Amy E. , Astorne, Walter, Bergstralh, Erik J., Knoedler, John Joseph, Bergstralh, Erik, Lieske, John, Lieske, John C.

Mayo Clinic

Journal of Endourology | September 30, 2015 | Volume: 29 | Issue: 12 | Pages: 1341-1345

10.1089/end.2015.0255 | PMID 26422682 Get It

Predicting time to castration resistance in hormone sensitive prostate cancer by a personalization algorithm based on a mechanistic model integrating patient data
Elishmereni, Moran, Shukrun, Ilan, Bevan, Graham H. , Nandy, Debashis, McKenzie, Kyle, Kohli, Manish , Agur, Zvia , McKenzie, Kyle M, Kheifetz, Yuri , Kohli, Manish

Mayo Clinic

The Prostate | September 30, 2015 | Volume: 76 | Issue: 1 | Pages: 48-57

10.1002/pros.23099 | PMID 26419619 Get It

BACKGROUNDProstate cancer (PCa) is a leading cause of cancer death of men worldwide. In hormone‐sensitive prostate cancer (HSPC), androgen deprivation therapy (ADT) is widely used, but an eventual failure on ADT heralds the passage to the castration‐resistant prostate cancer (CRPC) stage. Because predicting time to failure on ADT would allow improved planning of personal treatment strategy, we aimed to develop a predictive personalization algorithm for ADT efficacy in HSPC patients.METHODSA mathematical mechanistic model for HSPC progression and treatment was developed based on the underlying disease dynamics (represented by prostate‐specific antigen; PSA) as affected by ADT. Following fine‐tuning by a dataset of ADT‐treated HSPC patients, the model was embedded in an algorithm, which predicts the patient's time to biochemical failure (BF) based on clinical metrics obtained before or early in‐treatment.RESULTSThe mechanistic model, including a tumor growth law with a dynamic power and an elaborate ADT‐resistance mechanism, successfully retrieved individual time‐courses of PSA (R2 = 0.783). Using the personal Gleason score (GS) and PSA at diagnosis, as well as PSA dynamics from 6 months after ADT onset, and given the full ADT regimen, the personalization algorithm accurately predicted the individual time to BF of ADT in 90% of patients in the retrospective cohort (R2 = 0.98).CONCLUSIONSThe algorithm we have developed, predicting biochemical failure based on routine clinical tests, could be especially useful for patients destined for short‐lived ADT responses and quick progression to CRPC. Prospective studies must validate the utility of the algorithm for clinical decision‐making. Prostate 76:48–57, 2016. © 2015 Wiley Periodicals, Inc.
Analyzing the Potential for Incorrect Haplotype Calls with Different Pharmacogenomic Assays in Different Populations: A Simulation Based on 1000 Genomes Data
Samwald, Matthias , Blagec, Kathrin , Freimuth, Robert R. , Hofer, Sebastian J. , Freimuth, Robert R

Mayo Clinic

Pharmacogenomics | September 30, 2015 | Volume: 16 | Issue: 15 | Pages: 1713-1721

10.2217/pgs.15.108 | PMID 26419264 Get It

Palliative Radiation for Leukemic Arthropathy from Human T-Cell Lymphoma Virus-associated Adult T-Cell Leukemia Lymphoma
Birckhead, Brandon , Peterson, Jennifer , Patel, Ajay , Miller, Robert C. , Birckhead, Brandon J, Peterson, Jennifer L., Patel, Ajay B

Mayo Clinic

Rare Tumors | September 30, 2015 | Volume: 7 | Issue: 3 | Pages: 102-104

10.4081/rt.2015.5834 | PMID 26500728 Get It

Human T-cell lymphoma virus (HTLV)-associated adult T-cell leukemia lymphoma is a rare cancer in the United States, but there are several areas around the world where the virus is endemic. HTLV-associated adult T-cell leukemia lymphoma has been associated with leukemic arthropathy. We present a patient with HTLV-associated adult T-cell leukemia lymphoma with leukemic arthropathy. Although non-steroidal anti-inflammatory drugs and chemotherapy are often used for treatment, we describe the successful use of radiation therapy in the palliative relief of symptoms from leukemic arthropathy.
Recurrent duplications of 17q12 associated with variable phenotypes
Mitchell, Elyse, Douglas, Andrew G. L. , Kjaegaard, Susanne, Callewaert, Bert , Janssens, Sandra , Yuen, Amy Lawson, Skinner, Cindy , Failla, Pinella , Alberti, A , Avola, Emanuela , Fichera, Marco , Kibæk, Maria, Digilio, M. Cristina , Hannibal, Mark , Hollander, Nicolette S. den , Bizzarri, Veronica, Renieri, Alessandra , Mencarelli, Maria Antonietta , Fitzgerald, Tomas , Piazzolla, Serena, Oudenhove, Elke Van , Romano, Corrado , Schwartz, Charles E. , Rajan, Diana, Crolla, John A., Carter, Nigel, Hodge, Jennelle C. , Vanlander, Arnaud Vincent , Eichler, Evan E , Slavotinek, Anne , Escobar, Luis Fernando , Mefford, Heather C. , Callewaert, Bert , Renieri, Alessandra

Mayo Clinic

American Journal of Medical Genetics Part A | September 30, 2015 | Volume: 167 | Issue: 12 | Pages: 3038-3045

10.1002/ajmg.a.37351 | PMID 26420380 Get It

The ability to identify the clinical nature of the recurrent duplication of chromosome 17q12 has been limited by its rarity and the diverse range of phenotypes associated with this genomic change. In order to further define the clinical features of affected patients, detailed clinical information was collected in the largest series to date (30 patients and 2 of their siblings) through a multi‐institutional collaborative effort. The majority of patients presented with developmental delays varying from mild to severe. Though dysmorphic features were commonly reported, patients do not have consistent and recognizable features. Cardiac, ophthalmologic, growth, behavioral, and other abnormalities were each present in a subset of patients. The newly associated features potentially resulting from 17q12 duplication include height and weight above the 95th percentile, cataracts, microphthalmia, coloboma, astigmatism, tracheomalacia, cutaneous mosaicism, pectus excavatum, scoliosis, hypermobility, hypospadias, diverticulum of Kommerell, pyloric stenosis, and pseudohypoparathryoidism. The majority of duplications were inherited with some carrier parents reporting learning disabilities or microcephaly. We identified additional, potentially contributory copy number changes in a subset of patients, including one patient each with 16p11.2 deletion and 15q13.3 deletion. Our data further define and expand the clinical spectrum associated with duplications of 17q12 and provide support for the role of genomic modifiers contributing to phenotypic variability. © 2015 Wiley Periodicals, Inc.