Citations

Clear

410 citation(s) found for "Liščák, Roman".

IgM myeloma: A multicenter retrospective study of 134 patients
Castillo, Jorge J. , Brožová, Lucie , Czepiel, Jacek , Dávila, Julio , Ghobrial, Irene M. , Gozzetti, Alessandro , Gustine, Joshua , Hájek, Roman , Jayabalan, David , Laubach, Jacob P. , Lewicka, Barbara , Maisnar, Vladimír , Manasanch, Elisabet E. , Moreau, Philippe , Nahi, Hareth , Niesvizky, Rubén, Paba‐Prada, Claudia E., Pika, Tomáš, Pour, Luděk , Reagan, John L. , Richardson, Paul G. , Shah, Jatin J., Špıčka, Ivan , Vij, Ravi , Jurczyszyn, Artur , Crusoé, Edvan de Queiroz , Dispenzieri, Angela , Eveillard, Marion , Fiala, Mark A. , Hungria, Vânia , Jarkovský, Jiří , Morgan, Elizabeth A. , Richardson, Paul Gerard Guy , Waszczuk‐Gajda, Anna , Gertz, Morie A. , Hajek, Roman , Moreau, Philippe , Castillo, Jorge J , Ghobrial, Irene M , Gozzetti, Alessandro , Nahi, Hareth

Mayo Clinic

American Journal of Hematology | April 6, 2017 | Volume: 92 | Issue: 8 | Pages: 746-751

10.1002/ajh.24753 | PMID 28383205 Get It

AbstractIgM myeloma is a rare hematologic malignancy for which the clinicopathological features and patient outcomes have not been extensively studied. We carried out a multicenter retrospective study in patients with diagnosis of IgM myeloma defined by >10% marrow involvement by monoclonal plasma cells, presence of an IgM monoclonal paraproteinemia of any size, and anemia, renal dysfunction, hypercalcemia, lytic lesions and/or t(11;14) identified by FISH. A total of 134 patients from 20 centers were included in this analysis. The median age at diagnosis was 65.5 years with a male predominance (68%). Anemia, renal dysfunction, elevated calcium and skeletal lytic lesions were found in 37, 43, 19, and 70%, respectively. The median serum IgM level was 2,895 mg dL−1 with 19% of patients presenting with levels >6,000 mg dL−1. International Staging System (ISS) stages 1, 2, and 3 were seen in 40 (33%), 54 (44%), and 29 (24%) of patients, respectively. The malignant cells expressed CD20 (58%) and cyclin D1 (67%), and t(11;14) was the most common cytogenetic finding (39%). The median overall survival (OS) was 61 months. Higher ISS score was associated with worse survival (P = 0.02). Patients with IgM myeloma present with similar characteristics and outcomes as patients with more common myeloma subtypes.
Ambulatory reflux monitoring for diagnosis of gastro‐esophageal reflux disease: Update of the Porto consensus and recommendations from an international consensus group
Roman, Sabine , Gyawali, C. Prakash , Savarino, Edoardo , Wu, Justin C. Y. , Vela, Marcelo F. , Tatum, Roger P. , Fox, Mark , Pandolfino, John E. , Bredenoord, Albert J. , group, the GERD consensus, Tack, Jan , Penagini, Roberto , Mion, François , Bor, Serhat , Patel, Amit , Cicala, Michele , Bortoli, Nicola de , Azpiroz, Fernando , Roman, S , Gyawali, C P , Yadlapati, Rena , Zerbib, Frank , Tutuian, Radu I. , Sifrim, Daniel , Keller, Jutta , group, the GERD consensus, Patel, A , Penagini, Roberto , Tack, Jan , Bor, Serhat , de Bortoli, Nicola , Savarino, Edoardo

Mayo Clinic

Neurogastroenterology & Motility | March 31, 2017 | Volume: 29 | Issue: 10 | Pages: 1-15

10.1111/nmo.13067 | PMID 28370768 Get It

AbstractBackgroundAn international group of experts evaluated and revised recommendations for ambulatory reflux monitoring for the diagnosis of gastro‐esophageal reflux disease (GERD).MethodsLiterature search was focused on indications and technical recommendations for GERD testing and phenotypes definitions. Statements were proposed and discussed during several structured meetings.Key ResultsReflux testing should be performed after cessation of acid suppressive medication in patients with a low likelihood of GERD. In this setting, testing can be either catheter‐based or wireless pH‐monitoring or pH‐impedance monitoring. In patients with a high probability of GERD (esophagitis grade C and D, histology proven Barrett's mucosa >1 cm, peptic stricture, previous positive pH monitoring) and persistent symptoms, pH‐impedance monitoring should be performed on treatment. Recommendations are provided for data acquisition and analysis. Esophageal acid exposure is considered as pathological if acid exposure time (AET) is greater than 6% on pH testing. Number of reflux episodes and baseline impedance are exploratory metrics that may complement AET. Positive symptom reflux association is defined as symptom index (SI) >50% or symptom association probability (SAP) >95%. A positive symptom‐reflux association in the absence of pathological AET defines hypersensitivity to reflux.Conclusions and InferencesThe consensus group determined that grade C or D esophagitis, peptic stricture, histology proven Barrett's mucosa >1 cm, and esophageal acid exposure greater >6% are sufficient to define pathological GERD. Further testing should be considered when none of these criteria are fulfilled.
Wnt/β‐Catenin Signaling Activates Expression of the Bone‐Related Transcription Factor RUNX2 in Select Human Osteosarcoma Cell Types
Vega, Oscar A., Lucero, Claudia, Araya, Héctor, Jerez, Sofía , Tapia, Julio C. , Antonelli, Marcelo , Salazar‐Onfray, Flavio , Heras, Facundo Las, Thaler, Roman , Riester, Scott M. , Wijnen, André J. van , Galindo, Mario , van Wijnen, Andre J, Galindo, Mario A , Stein, Gary S. , van Wijnen, Andre J

Mayo Clinic

Journal of Cellular Biochemistry | March 28, 2017 | Volume: 118 | Issue: 11 | Pages: 3662-3674

10.1002/jcb.26011 | PMID 28370561 Get It

ABSTRACTOsteosarcoma is the most common malignant bone tumor in children and adolescents. Metastasis and poor responsiveness to chemotherapy in osteosarcoma correlates with over‐expression of the runt‐related transcription factor RUNX2, which normally plays a key role in osteogenic lineage commitment, osteoblast differentiation, and bone formation. Furthermore, WNT/β‐catenin signaling is over‐activated in osteosarcoma and promotes tumor progression. Importantly, the WNT/β‐catenin pathway normally activates RUNX2 gene expression during osteogenic lineage commitment. Therefore, we examined whether the WNT/β‐catenin pathway controls the tumor‐related elevation of RUNX2 expression in osteosarcoma. We analyzed protein levels and nuclear localization of β‐catenin and RUNX2 in a panel of human osteosarcoma cell lines (SAOS, MG63, U2OS, HOS, G292, and 143B). In all six cell lines, β‐catenin and RUNX2 are expressed to different degrees and localized in the nucleus and/or cytoplasm. SAOS cells have the highest levels of RUNX2 protein that is localized in the nucleus, while MG63 cells have the lowest RUNX2 levels which is mostly localized in the cytoplasm. Levels of β‐catenin and RUNX2 protein are enhanced in HOS, G292, and 143B cells after treatment with the GSK3β inhibitor SB216763. Furthermore, small interfering RNA (siRNA)‐mediated depletion of β‐catenin inhibits RUNX2 expression in G292 cells. Thus, WNT/β‐catenin activation is required for RUNX2 expression in at least some osteosarcoma cell types, where RUNX2 is known to promote expression of metastasis related genes. J. Cell. Biochem. 118: 3662–3674, 2017. © 2017 Wiley Periodicals, Inc.
Serum proteomics and ingenuity pathway analysis (IPA)-guided discovery of response markers to androgen ablation (AA) in prostate cancer.
Oberg, Ann L. , Riska, Shaun M., Sahasrabudhe, Deepak M. , Qin, Rui , Carlson, Rachel E. , Kohli, Manish , Mahoney, Douglas W. , Zhang, Yuji , Zenka, Roman M. , Zhang, Sheng

Mayo Clinic

Journal of Clinical Oncology | February 24, 2017 | Volume: 30 | Issue: 30_suppl | Pages: 11-11

10.1200/jco.2012.30.30_suppl.11 Get It

11 Background: Currently there are no serum markers of response to AA. We performed a proteome based analysis of serum from prostate cancer patients, followed by mapping of candidate markers to networks based on known molecular interactions in Ingenuity Knowledge Base (IKB). Methods: Isobaric mass tags for relative and absolute quanititation (iTRAQ) analyzed by reverse-phase liquid chromatography coupled to tandem mass spectrometry (LC/MS/MS) was performed in serum of 3 non-localized prostate cancer cohorts. The first cohort included 15 paired untreated hormone-sensitive “pre AA” and 3-month “post AA” specimens; the second included 10 “early AA failure” (median failure time: 11 months) and the third included 10 “late AA failure” specimens (median failure time: 95 months). Differentially expressed candidate proteins were identified by comparisons of (i) paired pre/post AA proteomes and (ii) post AA proteome with the combined AA failure cohorts at a False Discovery Rate of 0.2. To facilitate biological interpretation of multiple candidates identified in the comparisons, IPA was used. Candidate markers implicated in IPA networks with statistical significance were pursued in a second, independent patient cohort for association with time to AA failure using univariate Cox regression analysis. Results: Median PSA for pre/post AA first cohort were 3.15 and 0.29 ng/ml. Median PSA for the second and third cohorts were 27.3 and 4.3 ng/ml. Between post AA and AA failure cohorts, 149 proteins were differentially expressed. Between early and late AA failure 98 proteins were differentially expressed; 47 proteins were common in both comparisons. Network enrichment analysis of the 47 proteins by IPA identified four interaction networks (p<0.01), one of which highlighted a role for 17-β-estradiol (E1). Gas chromatography used for measuring 3-month post AA initiation serum E1, estrone (E2) and testosterone levels (N=38) detected high E1, E2 levels associated with longer time to AA failure (P=0.07 for E1; P=0.08 for E2) in the independent cohort. Conclusions: A global proteomic analysis identified post AA initiation serum E1, E2 levels as potential response markers, which needs validation.
Serum proteomics guided discovery of predictive biomarkers of response to androgen ablation (AA) in prostate cancer.
Oberg, Ann L. , Riska, Shaun M., Sahasrabudhe, Deepak M. , Kohli, Manish , Mahoney, Douglas W. , Zenka, Roman M. , Zhang, Sheng

Mayo Clinic

Journal of Clinical Oncology | February 23, 2017 | Volume: 30 | Issue: 5_suppl | Pages: 104-104

10.1200/jco.2012.30.5_suppl.104 Get It

104 Background: Currently there are no serum predictive markers of response to AA. We used a proteomic based analytic approach to identify candidates. Methods: Serum from three non-localized prostate cancer cohorts was analyzed. The first included15 paired untreated hormone-sensitive “pre-AA” and 3-month “post-AA” specimens; the second included 10 “early AA failure” (median time to AA failure:11 months) and the third included 10 “late AA failure” specimens (median time to AA failure: 95 months). Proteomic analysis was performed with isobaric mass tags for relative and absolute quanititation (iTRAQ) analyzed by reverse-phase liquid chromatography coupled to tandem mass spectrometry (LC/MS/MS). Differentially expressed candidate proteins were identified by comparisons of (i) paired pre/post-AA proteomes and (ii) post-AA proteome with the combined AA failure cohorts at a False Discovery Rate of 0.2. ELISA assays were used to verify candidate markers in a second stored aliquot of first cohort specimens. This cohort was followed for AA failure. Association of post-AA ELISA levels of candidate markers with time to AA failure was performed using Cox proportional hazards regression, summarized as relative risk (RR) for AA failure. Results: Median PSA in pre/post-AA first cohort were 3.15 ng/ml and 0.29 ng/ml. Median PSA in the second and third cohorts were 27.3 and 4.3 ng/ml. Between post-AA and AA failure cohorts, 149 proteins were differentially expressed. Between early and late AA failure 98 proteins were differentially expressed; 47 proteins were common in both comparisons. ELISA assays verified expression levels of 2/47 proteins in the first cohort; zinc alpha-2 macroglobulin (ZAG), and Neuropilin-2 (NPL2). Median change in ZAG decreased by 2073.5 ng/ml (post versus pre-AA) while median change in NPL2 levels increased by 2.9 ng/ml. After a median follow-up of 43 months from the post-AA time-point, 4/15 first cohort subjects had failed AA. The RR of AA failure for ZAG levels below the median change was 3.8 (95% CI: 0.4-37) and 3.0 (95% CI: 0.3-29) for NPL2. Conclusions: A global proteomic analysis identified ZAG and NPL2 as candidate serum predictive markers of AA response which needs further validation.
Improved Post-Thaw Function and Epigenetic Changes in Mesenchymal Stromal Cells Cryopreserved Using Multicomponent Osmolyte Solutions
Pollock, Kathryn, Samsonraj, Rebekah M. , Dudakovic, Amel , Thaler, Roman , Stumbras, Aron R., McKenna, David H. , Dosa, Peter I. , Wijnen, André J. van , Hubel, Allison , van Wijnen, Andre J, van Wijnen, Andre J

Mayo Clinic

Stem Cells and Development | February 9, 2017 | Volume: 26 | Issue: 11 | Pages: 828-842

10.1089/scd.2016.0347 | PMID 28178884 Get It

A quantitative symmetry‐based analysis of hyperacute ischemic stroke lesions in noncontrast computed tomography
Peter, Roman , Korfiatis, Panagiotis , Blezek, Daniel J. , Beitia, Anton Oscar , Štěpán-Buksakowska, Irena, Hořínek, Daniel, Flemming, Kelly D. , Blezek, Daniel, Erickson, Bradley J. , Flemming, Kelly D

Mayo Clinic

Medical Physics | January 9, 2017 | Volume: 44 | Issue: 1 | Pages: 192-199

10.1002/mp.12015 | PMID 28066898 Get It

PurposeEarly identification of ischemic stroke plays a significant role in treatment and potential recovery of damaged brain tissue. In noncontrast CT (ncCT), the differences between ischemic changes and healthy tissue are usually very subtle during the hyperacute phase (< 8 h from the stroke onset). Therefore, visual comparison of both hemispheres is an important step in clinical assessment. A quantitative symmetry‐based analysis of texture features of ischemic lesions in noncontrast CT images may provide an important information for differentiation of ischemic and healthy brain tissue in this phase.MethodsOne hundred thirty‐nine (139) ncCT scans of hyperacute ischemic stroke with follow‐up magnetic resonance diffusion‐weighted (MR‐DW) images were collected. The regions of stroke were identified in the MR‐DW images, which were spatially aligned to corresponding ncCT images. A state‐of‐the‐art symmetric diffeomorphic image registration was utilized for the alignment of CT and MR‐DW, for identification of individual brain hemispheres, and for localization of the region representing healthy tissue contralateral to the stroke cores. Texture analysis included extraction and classification of co‐occurrence and run‐length texture‐based image features in the regions of ischemic stroke and their contralateral regions.ResultsThe classification schemes achieved area under the receiver operating characteristic [Az] ≈ 0.82 for the whole dataset. There was no statistically significant difference in the performance of classifiers for the data sets with time between 2 and 8 hours from symptom onset. The performance of the classifiers did not depend on the size of the stroke regions.ConclusionsThe results provide a set of optimal texture features which are suitable for distinguishing between hyperacute ischemic lesions and their corresponding contralateral brain tissue in noncontrast CT. This work is an initial step toward development of an automated decision support system for detection of hyperacute ischemic stroke lesions on noncontrast CT of the brain.
Clarifying immunoglobulin gene usage in systemic and localized immunoglobulin light-chain amyloidosis by mass spectrometry
Kourelis, Taxiarchis , Dasari, Surendra , Theis, Jason D. , Ramı́rez-Alvarado, Marina , Kurtin, Paul J. , Zeldenrust, Steven R., Zenka, Roman M. , Gertz, Morie A. , Doǧan, Ahmet , Dispenzieri, Angela , Ramirez-Alvarado, Marina

Mayo Clinic

Blood | November 17, 2016 | Volume: 129 | Issue: 3 | Pages: 299-306

10.1182/blood-2016-10-743997 | PMID 27856462 Get It

Key Points Mass spectrometry is a high-throughput, low-resource technique that can identify immunoglobulin variable region gene from tissue specimens. IGVL gene usage is restricted and different between systemic and localized AL and only partially explains organ tropism in this disease.
Histone H4 Methyltransferase Suv420h2 Maintains Fidelity of Osteoblast Differentiation
Khani, Farzaneh , Thaler, Roman , Paradise, Christopher R. , Deyle, David R. , Julio, Marianne Kruijthof‐de, Galindo, Mario , Gordon, Jonathan A. R., Dudakovic, Amel , Wijnen, André J. van , van Wijnen, Andre J, Stein, Gary S. , van Wijnen, Andre J , van Wijnen, Andre J

Mayo Clinic

Journal of Cellular Biochemistry | November 10, 2016 | Volume: 118 | Issue: 5 | Pages: 1262-1272

10.1002/jcb.25787 | PMID 27862226 Get It

ABSTRACTOsteogenic lineage commitment and progression is controlled by multiple signaling pathways (e.g., WNT, BMP, FGF) that converge on bone‐related transcription factors. Access of osteogenic transcription factors to chromatin is controlled by epigenetic regulators that generate post‐translational modifications of histones (“histone code”), as well as read, edit and/or erase these modifications. Our understanding of the biological role of epigenetic regulators in osteoblast differentiation remains limited. Therefore, we performed next‐generation RNA sequencing (RNA‐seq) and established which chromatin‐related proteins are robustly expressed in mouse bone tissues (e.g., fracture callus, calvarial bone). These studies also revealed that cells with increased osteogenic potential have higher levels of the H4K20 methyl transferase Suv420h2 compared to other methyl transferases (e.g., Suv39h1, Suv39h2, Suv420h1, Ezh1, Ezh2). We find that all six epigenetic regulators are transiently expressed at different stages of osteoblast differentiation in culture, with maximal mRNAs levels of Suv39h1 and Suv39h2 (at day 3) preceding maximal expression of Suv420h1 and Suv420h2 (at day 7) and developmental stages that reflect, respectively, early and later collagen matrix deposition. Loss of function analysis of Suv420h2 by siRNA depletion shows loss of H4K20 methylation and decreased expression of bone biomarkers (e.g., alkaline phosphatase/Alpl) and osteogenic transcription factors (e.g., Sp7/Osterix). Furthermore, Suv420h2 is required for matrix mineralization during osteoblast differentiation. We conclude that Suv420h2 controls the H4K20 methylome of osteoblasts and is critical for normal progression of osteoblastogenesis. J. Cell. Biochem. 118: 1262–1272, 2017. © 2016 Wiley Periodicals, Inc.