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1012 citation(s) found for "Zhao, Yu".

Role of Long Chain Acyl-CoA Synthetases in MASH-driven Hepatocellular Carcinoma and Ferroptosis
Classon, Peyton, Taner, Timuçin , Povero, Davide , Wixom, Alexander Q. , Mancipe, Natalia Calixto , Graham, Rondell P. , Zhao, Yu , Tran, Nguyen H.

Mayo Clinic

No container title available | March 16, 2025 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1101/2025.03.13.642692 Get It

ABSTRACT Metabolic-associated steatohepatitis-driven hepatocellular carcinoma (MASH-HCC) incidence is rapidly rising worldwide. Lipid metabolic reprogramming is a hallmark of solid tumors to satisfy cancer high metabolic demand. However, it may confer sensitivity to ferroptosis, a cell death mode driven by iron-dependent lipid peroxidation. In this report, we describe the lipid metabolic landscape in MASH-HCC and characterize long chain acyl-CoA synthetases (ACSLs), a family of enzymes involved in synthesis of cellular lipids. Bulk RNA-sequencing, single-cell RNA-sequencing, spatial transcriptomics and immunohistochemistry analyses of human MASH-HCC were integrated to identify differentially expressed lipid metabolism genes. Ferroptosis in vitro was assessed in human HCC cell lines. A characterization of ACSLs was also conducted at the single-cell level in a diet-induced experimental murine model of MASH-HCC. Our analysis revealed that in human MASH-HCC, ACSLs exhibit a heterogeneous expression, with ACSL4 notably enriched in tumor tissues, contrasting with ACSL5 upregulation in non-cancerous MASH. We identified a unique lipid metabolic gene signature of MASH-HCC, which included genes associated with ferroptosis vulnerability. In vitro , ACSL4 upregulation was associated with increased ferroptosis sensitivity in human HCC cell lines. Lastly, single-cell RNA-sequencing revealed elevated ACSL4 expression in immune cells in a murine MASH-HCC model, suggesting a role of ACSL4 in shaping the tumor immune microenvironment. Overall, this report offers new insights into lipid metabolic landscape and ferroptosis sensitivity for novel MASH-HCC treatments. GRAPHICAL ABSTRACT
Mono-ubiquitination of TopBP1 by PHRF1 enhances ATR activation and genomic stability
Cai, Chenghui, Gao, Huanyao , Moon, Jaeyoung , Christyani, Grania, Hao, Yalan , Liu, Tongzheng , Lou, Zhenkun , Kim, Wootae , Lou, Zhenkun , Kim, Wootae , Zhao, Fei , Moon, Jaeyoung, Qin, Sisi

Mayo Clinic

Nucleic Acids Research | March 7, 2025 | Volume: 53 | Issue: 5 | Pages: No page available

10.1093/nar/gkaf073 | PMID 40052822 Get It

Abstract The TopBP1-ATR axis is critical for maintaining genomic stability during DNA replication stress, yet the precise regulation of TopBP1 in replication stress responses remains poorly understood. In this study, we identified PHD and Ring Finger Domains 1 (PHRF1) as an important ATR activator through its interaction with TopBP1. Our analysis revealed a correlation between PHRF1 and genomic stability in cancer patients. Mechanistically, PHRF1 is recruited to DNA lesions in a manner dependent on its PHD domain and histone methylation. Subsequently, PHRF1 mono-ubiquitinates TopBP1 at lysine 73, which enhances the TopBP1-ATR interaction and activates ATR. Depletion of PHRF1 disrupts ATR activation and sensitizes cells to replication stress-inducing agents. Furthermore, conditional knockout of Phrf1 in mice leads to early lethality and impaired ATR-Chk1 axis signaling. Collectively, our findings establish PHRF1 as a novel E3 ligase for TopBP1, coordinating the replication stress response by enhancing TopBP1-ATR signaling.
Macrophage peroxisomes guide alveolar regeneration and limit SARS-CoV-2 tissue sequelae
Wei, Xiaoqin , Qian, Wei , Narasimhan, Harish , Chan, T. K., Liu, Xue , Arish, Mohd , Young, Scott , Li, Chaofan , Cheon, In Su , Yu, Qing , Santos, Gislane de Almeida , Yeatts, Eric V., Spear, Olivia J., Yi, Mou, Hahn, Young S. , Kaplan, Mark H. , Sperling, Anne I. , Shim, Yun M. , Vassallo, Robert , Chen, Peter , Roden, Anja C. , Que, Jianwen , Chan, Ting , Young, Samuel , de Almeida Santos, Gislane , Zhao, Xiao-Yu , Yeatts, Eric V , Parimon, Tanyalak , Fang, Yinshan , Hahn, Young S , Bullock, Timothy N J , Somerville, Lindsay A , Kaplan, Mark H , Sperling, Anne I , Shim, Yun Michael , Vassallo, Robert , Chen, Peter , Ewald, Sarah E , Roden, Anja C , Que, Jianwen , Jiang, Dianhua , Sun, Jie , Li, Chaofan , Yi, Megan, Somerville, Lindsay , Sun, Jie

Mayo Clinic

Science | March 6, 2025 | Volume: 387 | Issue: 6738 | Pages: No page available

10.1126/science.adq2509 | PMID 40048515 Get It

Peroxisomes are vital but often overlooked metabolic organelles. We found that excessive interferon signaling remodeled macrophage peroxisomes. This loss of peroxisomes impaired inflammation resolution and lung repair during severe respiratory viral infections. Peroxisomes were found to modulate lipid metabolism and mitochondrial health in a macrophage type-specific manner and enhanced alveolar macrophage-mediated tissue repair and alveolar regeneration after viral infection. Peroxisomes also prevented excessive macrophage inflammasome activation and IL-1β release, limiting accumulation of KRT8 high dysplastic epithelial progenitors following viral injury. Pharmacologically enhancing peroxisome biogenesis mitigated both acute symptoms and post-acute sequelae of COVID-19 (PASC) in animal models. Thus, macrophage peroxisome dysfunction contributes to chronic lung pathology and fibrosis after severe acute respiratory syndrome coronavirus 2 infection.
APOE Genotype Influences on The Brain Metabolome of Aging Mice – Role for Mitochondrial Energetics in Mechanisms of Resilience in APOE2 Genotype
Borkowski, Kamil , Liang, Nuanyi , Zhao, Na , Huynh, Kevin, Karu, Naama , MahmoudianDehkordi, Siamak , Kueider‐Paisley, Alexandra , Kanekiyo, Takahisa , Bu, Guojun , Huynh, Kevin , Arnold, Matthias , Karu, Naama , Mahmoudiandehkordi, Siamak , Kueider-Paisley, Alexandra , Kanekiyo, Takahisa , Bu, Guojun , Kaddurah-Daouk, Rima , Zhao, Na , Arnold, Matthias , Kaddurah‐Daouk, Rima

Mayo Clinic

No container title available | March 1, 2025 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1101/2025.02.25.640178 | PMID 40060656 Get It

Abstract Alzheimer’s disease (AD) risk and progression are significantly influenced by APOE genotype with APOE4 increasing and APOE2 decreasing susceptibility compared to APOE3. While the effect of those genotypes was extensively studied on blood metabolome, less is known about their impact in the brain. Here we investigated the impacts of APOE genotypes and aging on brain metabolic profiles across the lifespan, using human APOE-targeted replacement mice. Biocrates P180 targeted metabolomics platform was used to measure a broad range of metabolites probing various metabolic processes. In all genotypes investigated we report changes in acylcarnitines, biogenic amines, amino acids, phospholipids and sphingomyelins during aging. The decreased ratio of medium to long-chain acylcarnitine suggests a reduced level of fatty acid β-oxidation and thus the possibility of mitochondrial dysfunction as these animals age. Additionally, aging APOE2/2 mice had altered branch-chain amino acids (BCAA) profile and increased their downstream metabolite C5 acylcarnitine, indicating increased branched-chain amino acid utilization in TCA cycle and better energetic profile endowed by this protective genotype. We compared these results with human dorsolateral prefrontal cortex metabolomic data from the Religious Orders Study/Memory and Aging Project, and we found that the carriers of APOE2/3 genotype had lower markers of impaired BCAA katabolism, including tiglyl carnitine, methylmalonate and 3-methylglutaconate. In summary, these results suggest a potential involvement of the APOE2 genotype in BCAA utilization in the TCA cycle and nominate these humanized APOE mouse models for further study of APOE in AD, brain aging, and brain BCAA utilization for energy. We have previously shown lower plasma BCAA to be associated with incident dementia, and their higher levels in brain with AD pathology and cognitive impairment. Those findings together with our current results could potentially explain the AD-protective effect of APOE2 genotype by enabling higher utilization of BCAA for energy during the decline of fatty acid β-oxidation.
Chemogenetic activation of microglial Gi signaling decreases microglial surveillance and impairs neuronal synchronization
Wang, Lingxiao , Kleidonas, Dimitrios , Qi, Fangfang , Liang, Yue , Zheng, Jiaying , Wu, Long‐Jun , Zhao, Shunyi , Wang, Lingxiao , Kleidonas, Dimitrios , Qi, Fangfang , Liang, Yue , Zheng, Jiaying , Umpierre, Anthony D , Wu, Long-Jun , Zhao, Shunyi , Umpierre, Anthony D.

Mayo Clinic

Science Advances | February 28, 2025 | Volume: 11 | Issue: 9 | Pages: No page available

10.1126/sciadv.ado7829 | PMID 40020068 Get It

Microglia actively survey the brain and dynamically interact with neurons to maintain brain homeostasis. Microglial Gi protein–coupled receptors (Gi-GPCRs) play a critical role in microglia-neuron communications. However, the impact of temporally activating microglial Gi signaling on microglial dynamics and neuronal activity in the homeostatic brain remains largely unknown. In this study, we used Gi-based designer receptors exclusively activated by designer drugs (Gi-DREADD) to selectively and temporally modulate microglial Gi signaling pathway. By integrating this chemogenetic approach with in vivo two-photon imaging, we observed that exogenous activation of microglial Gi signaling transiently inhibited microglial process dynamics, reduced neuronal activity, and impaired neuronal synchronization. These altered neuronal functions were associated with a decrease in interactions between microglia and neuron somata. Together, this study demonstrates that acute, exogenous activation of microglial Gi signaling regulates neuronal circuit function, offering a potential pharmacological target for the neuromodulation through microglia.
Unlocking The Potential: Telehealth Services and Social Determinants of Health Outcomes in Health Care Delivery
Hamadi, Hanadi , Zhao, Mei , Sam, Franscisca, Murphy, Bryan, Niazi, Shehzad K. , Spaulding, Aaron , Hamadi, Hanadi Y , Niazi, Shehzad, Spaulding, Aaron C. , Spaulding, Aaron , Murphy, Bryan

Mayo Clinic

Telemedicine and e-Health | February 17, 2025 | Volume: 31 | Issue: 6 | Pages: 758-764

10.1089/tmj.2024.0358 | PMID 39960805 Get It

Background: Unmet social needs may hinder health care providers’ ability to deliver suitable care. Telehealth has emerged as a mechanism to broaden care reach; however, limited studies have examined the relationships between telehealth services and social need outcomes. This study explores the impact of telehealth services, encompassing (1) telestroke, (2) telepsychiatry and addiction treatment, (3) teleconsultation and office visits,(4) tele-intensive care units, (5) telemonitoring postdischarge, (6) ongoing chronic care management, and (7) other remote monitoring, on social need performance outcomes. Methods: The 2022 American Hospital Association annual survey and the Area Health Resource Files, which include comprehensive hospital and community indicators, were utilized. A mixed-effects logistic regression was applied, analyzing 1,005 acute care general hospitals. Results: The results revealed that patients who received telemonitoring services after discharge were 1.72 (95% confidence interval [CI]: 1.03-2.88) times more likely to achieve better health outcomes compared with those who did not receive such services. These patients also experienced a significant decrease in the likelihood of requiring additional hospital or system services, with an odds ratio of 2.39 (95% CI: 1.32-4.00). Additionally, patients utilizing telepsychiatry and addiction treatment services had 1.66 times higher odds of reporting improved community health status (95% CI: 1.22-2.27). Lastly, patients who used teleconsultation and office visit services had 38% lower odds of experiencing poor community health status (95% CI: 0.40-0.95). Discussion: The findings highlight the potential of targeted telehealth services to positively impact health outcomes, reduce health care costs, and improve community health status.
Exploring the Trade-Offs: Unified Large Language Models vs Local Fine-Tuned Models for Highly-Specific Radiology NLI Task
Wu, Zihao , Zhang, Lu , Cao, Chao , Liu, Zhengliang , Zhao, Lin , Li, Yiwei , Dai, Haixing , Ma, Chong , Li, Gang , Liu, Tianming , Wu, Zihao , Zhang, Lu , Yu, Xiaowei , Liu, Wei , Li, Quanzheng , Shen, Dinggang G. , Li, Xiang , Zhu, Dajiang , Liu, Tianming

Mayo Clinic

IEEE Transactions on Big Data | February 13, 2025 | Volume: 11 | Issue: 3 | Pages: 1027-1041

10.1109/tbdata.2025.3536928 Get It

Carbon Radiotherapy for Rare Tumors: Electronic Consent and Follow-up
Galatas, Aimée , Mohammadi, Homan , Janus, Jeffrey R. , Zhao, Yujie , Donaldson, Angela M. , Olomu, Osarenoma , Holtzman, Adam L. , Patel, Samip , Almeida, João Paulo , Liu, Emily L. , Haydu, Lauren E. , Hoppe, Bradford S.

Mayo Clinic

Journal of Neurological Surgery Part B: Skull Base | February 7, 2025 | Volume: 86 | Issue: No issue available | Pages: No page available

10.1055/s-0045-1803628 Get It

Advanced External Beam Stereotactic Radiotherapy for Skull Base Reirradiation
Wang, He , Alsanea, Fahed , Zhang, X , Liu, Wei , Yang, Jinzhong , Williamson, Tyler D. , Hunter, Rachel , Balter, Peter , Briere, Tina M. , Zhu, Ronald X., Moreno, Amy C. , Reddy, Jay P. , Rosenthal, D.I., Gunn, Gary B., Phan, Jack , Liu, Wei , Yang, Jinzhong , Williamson, Tyler D , Hunter, Rachel A , Briere, Tina M , Moreno, Amy C , Reddy, Jay P , Phan, Jack , Rhee, Dong Joo , Wen, Zhifei , Zhao, Yao Jiang , Lee, Anna , Garden, Adam S. , Gunn, Gary B.

Mayo Clinic

Cancers | February 6, 2025 | Volume: 17 | Issue: 3 | Pages: 540

10.3390/cancers17030540 | PMID 39941906 Get It

Background/Objectives: Stereotactic body radiation therapy (SBRT) for skull base reirradiation is particularly challenging, as patients have already received substantial radiation doses to the region, and nearby normal organs may have approached their tolerance limit from prior treatments. In this study, we reviewed the characteristics and capabilities of four advanced external beam radiation delivery systems and four modern treatment planning systems and evaluated the treatment plan quality of each technique using skull base reirradiation patient cases. Methods: SBRT plans were generated for sixteen skull base reirradiation patients using four modalities: the GK plan for the Elekta Leksell Gamma Knife Perfexion/ICON, the CyberKnife (CK) plan for the Accuray CyberKnife, the intensity-modulated proton therapy (IMPT) plan for the Hitachi ProBeat-FR proton therapy machine, and the volumetric-modulated arc therapy (VMAT) plan for the Varian TrueBeam STx. These plans were evaluated and compared using two novel gradient indices in addition to traditional dosimetry metrics for targets and organs at risk (OARs). The steepest border gradient quantified the percent prescription dose fall-off per millimeter at the boundary between the target and adjacent critical structures. This gradient index highlighted the system’s ability to spare nearby critical OARs. The volume gradient assessed the extent of dose spread outside the target toward the patient’s body. Results: All plans achieved comparable target coverage and conformity, while IMPT and VMAT demonstrated significantly better uniformity. The GK plans exhibited the highest border gradient, up to 20.9%/mm, followed by small-spot-size IMPT plans and CK plans. Additionally, IMPT plans showed the benefit of reduced dose spread in low-dose regions and the lowest maximum and mean doses to the brainstem and carotid artery. Conclusions: The advanced external beam radiotherapy modalities evaluated in this study are well-suited for SBRT in skull base reirradiation, which demands precise targeting of tumors with highly conformal doses and steep dose gradients to protect nearby normal structures.
986: THE IMPACT OF EXTENDING BETA-LACTAM INFUSIONS ON INTRAVENOUS ACCESS REQUIREMENTS
Kooda, Kirstin , Nelson, Julia, Ausman, Sara , Saleh, Omar Abu , Warfield, Micaela , Zhao, Maggie, Frazee, Erin N. , Nelson, Julia, Ausman, Sara E , Rivera, Christina G. , Rule, Andrew D. , Stevens, Ryan W. , Zhao, Maggie

Mayo Clinic

Critical Care Medicine | January 31, 2025 | Volume: 53 | Issue: 1 | Pages: No page available

10.1097/01.ccm.0001102608.95590.33 Get It