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Showing 10 of 107964 citations.

Proton dose calculation with transformer: Transforming spot map to dose
Tang, Xueyan , Tseung, H. Wan Chan, Johnson, Jed E., Moseley, D.J., Tseung, Hok Wan Chan, Moseley, Doug J, Qian, Jing , Pepin, Mark D., Routman, David M. , Qian, Jing

Mayo Clinic

Medical Physics | March 31, 2025 | Volume: 52 | Issue: 6 | Pages: 4941-4952

10.1002/mp.17794 | PMID 40156258 Get It

Abstract Background Conventional proton dose calculation methods are either time‐ and resource‐intensive, like Monte Carlo (MC) simulations, or they sacrifice accuracy, as seen with analytical methods. This trade‐off between computational efficiency and accuracy highlights the need for improved dose calculation approaches in clinical settings. Purpose This study aims to develop a deep‐learning‐based model that calculates dose‐to‐water ( D W ) and dose‐to‐medium ( D M ) using patient anatomy and proton spot map (PSM), achieving approaching MC‐level accuracy with significantly reduced computation time. Additionally, the study seeks to generalize the model to different treatment sites using transfer learning. Methods A SwinUNetr model was developed using 259 four‐field prostate proton stereotactic body radiation therapy (SBRT) plans to calculate patient‐specific D W and D M distributions from CT and projected PSM (PPSM). The PPSM was created by projecting PSM into the CT scans using spot coordinates, stopping power ratio, beam divergence, and water‐equivalent thickness. Fine‐tuning was then performed for the central nervous system (CNS) site using 84 CNS plans. The model's accuracy was evaluated against MC simulation benchmarks using mean absolute error (MAE), gamma analysis (2% local dose difference, 2‐mm distance‐to‐agreement, 10% low dose threshold), and relevant clinical indices on the test dataset. Results The trained model achieved a single‐field dose calculation time of 0.07 s on a Nvidia‐A100 GPU, over 100 times faster than MC simulators. For the prostate site, the best‐performing model showed an average MAE of 0.26 ± 0.17 Gy and a gamma index of 92.2% ± 3.1% in dose regions above 10% of the maximum dose for D W calculations, and an MAE of 0.30 ± 0.19 Gy with a gamma index of 89.7% ± 3.9% for D M calculations. After transfer learning for CNS plans, the model achieved an MAE of 0.49 ± 0.24 Gy and a gamma index of 90.1% ± 2.7% for D W computations, and an MAE of 0.47 ± 0.25 Gy with a gamma index of 85.4% ± 7.1% for D M computations. Conclusions The SwinUNetr model provides an efficient and accurate method for computing dose distributions in proton therapy. It also opens the possibility of reverse‐engineering PSM from D W , potentially speeding up treatment planning while maintaining accuracy.
Prevalence of symptomatic toxicities for novel therapies in adult oncology trials: a scoping review
King, Amanda , Vasilj, Tamara , Cooper, Diane, Vera, Elizabeth , Berhanu, Sefanit, Johnson, Morgan , Locke, Ciara, McIver, Bennett , Basch, Ethan, Cappeleri, Joseph, Dueck, Amylou, Jones, Lee , Minasian, Lori M. , Mendoza, Tito R. , Dueck, Amylou C. , Cappelleri, Joseph C. , Dueck, A. C. , King, Amanda L , Basch, Ethan , Cappelleri, Joseph C , Gilbert, Mark R , Jones, Lee , Li, Yuelin , Reeve, Bryce B. , Armstrong, Terri S , Mendoza, Tito , Johnson, Morgan , Li, Yuelin , Armstrong, Terri S.

Mayo Clinic

JNCI Cancer Spectrum | March 31, 2025 | Volume: 9 | Issue: 3 | Pages: No page available

10.1093/jncics/pkaf036 | PMID 40152251 Get It

Abstract Background Patients’ self-report of their symptoms can provide important data for the evaluation of treatment benefit and tolerability of oncology drugs. Contemporary treatment approaches, including immunotherapy and molecular targeted therapies, have unique toxicities based on their novel mechanisms of action. This scoping review aimed to summarize evidence from existing reviews and clinical practice guidelines to examine the type and prevalence of toxicities including symptomatic adverse events (sympAEs) for adult cancer patients to inform clinical care and therapeutic trials. Methods A systematic search of PubMed, Web of Science, and Embase was performed using predefined eligibility criteria. Thirty-one literature reviews and 3 clinical practice guidelines met inclusion criteria and were selected for review and data abstraction. Results Findings from this scoping review demonstrated several leading sympAEs that were reported across immunotherapy and targeted therapy drugs, including fatigue, diarrhea, and rash. In addition to these more prevalent sympAEs, there were some less frequently reported class-specific sympAEs, which had potential for significant harm or disability to the patient if not properly identified and treated. Many studies reported toxicities as AEs or syndromes solely using data reported by clinicians without additional self-report from patients. Conclusion We identified several core sympAEs experienced by patients participating in oncology trials using immunotherapy and targeted therapy agents, which has implications for future trial design and drug labeling. Future cancer trials should assess patient-reported sympAEs based on the identified drug mechanism to inform the tolerability of these newer agents and enhance patient safety during trial participation and clinical care.
Neuropilin-1: A Multifaceted Target for Cancer Therapy
Varanasi, Sai Manasa , Gulani, Yash , Rachamala, Hari Krishnareddy, Mukhopadhyay, Debabrata , Angom, Ramcharan Singh , Mukhopadhyay, Debabrata , Singh Angom, Ramcharan , Rachamala, Hari Krishnareddy

Mayo Clinic

Current Oncology | March 31, 2025 | Volume: 32 | Issue: 4 | Pages: 203

10.3390/curroncol32040203 | PMID 40277760 Get It

Neuropilin-1 (NRP1), initially identified as a neuronal guidance protein, has emerged as a multifaceted regulator in cancer biology. Beyond its role in axonal guidance and angiogenesis, NRP1 is increasingly recognized for its significant impact on tumor progression and therapeutic outcomes. This review explores the diverse functions of NRP1 in cancer, encompassing its influence on tumor cell proliferation, migration, invasion, and metastasis. NRP1 interacts with several key signaling pathways, including vascular endothelial growth factor (VEGF), semaphorins, and transforming growth factor-beta (TGF-β), modulating the tumor microenvironment and promoting angiogenesis. Moreover, NRP1 expression correlates with poor prognosis in various malignancies, underscoring its potential as a prognostic biomarker. Therapeutically, targeting NRP1 holds promise as a novel strategy to inhibit tumor growth and enhance the efficacy of regular treatments such as chemotherapy and radiotherapy. Strategies involving NRP1-targeted therapies, including monoclonal antibodies, small molecule inhibitors, and gene silencing techniques, are being actively investigated in preclinical and clinical settings. Despite challenges in specificity and delivery, advances in understanding NRP1 biology offer new avenues for personalized cancer therapy. Although several types of cancer cells can express NRPs, the role of NRPs in tumor pathogenesis is largely unknown. Future investigations are needed to enhance our understanding of the effects and mechanisms of NRPs on the proliferation, apoptosis, and migration of neuronal, endothelial, and cancer cells. The novel frameworks or multi-omics approaches integrate data from multiple databases to better understand cancer’s molecular and clinical features, develop personalized therapies, and help identify biomarkers. This review highlights the pivotal role of NRP1 in cancer pathogenesis and discusses its implications for developing targeted therapeutic approaches to improve patient outcomes, highlighting the role of OMICS in targeting cancer patients for personalized therapy.
Measurable Residual Disease Analysis by Flow Cytometry: Assay Validation and Characterization of 385 Consecutive Cases of Acute Myeloid Leukemia
Jum’ah, Husam , Otteson, Gregory E., Timm, Michael, Weybright, Matthew J. , Shi, Min , Horna, Pedro , Reichard, Kaaren K. , Olteanu, Horatiu , Jum'ah, Husam A, Timm, Michael M, Olteanu, Horatiu , Shi, Min , Horna, Pedro , Jevremović, Dragan

Mayo Clinic

Cancers | March 31, 2025 | Volume: 17 | Issue: 7 | Pages: 1155

10.3390/cancers17071155 | PMID 40227672 Get It

Background/Objectives: Acute myeloid leukemia (AML) is a biologically heterogeneous malignancy with a variable prognosis. Despite many patients achieving complete remission, relapse remains common, underscoring the need for effective prognostic markers. Measurable residual disease (MRD) has emerged as a critical prognostic indicator, associated with higher relapse risk and shorter survival. This study reports on our initial experience of MRD detection by flow cytometry in 385 bone marrow samples from 126 AML patients. Methods: The flow cytometry MRD assay, validated according to stringent consensus recommendations, consists of a 3-tube, 10-color panel incorporating a broad spectrum of lineage differentiation markers. Analytical specificity, sensitivity, precision, and reproducibility were evaluated, demonstrating the assay’s robustness. Results: The results reveal distinct immunophenotypic aberrancies in all AML cases, with consistent identification of aberrant immunophenotypes in follow-up specimens. AML MRD was detected in 32 out of 126 patients (25%) and in 77 out of 385 analyses (20%), with a median aberrant blast percentage of 1.87% (range, 0.01–12). A change in immunophenotype was documented in 21% of the MRD-positive cases. MRD positivity detected in the first sample studied was associated with reduced overall survival (HR: 5.153; p < 0.0001). Conclusions: Our findings support the integration of flow cytometric MRD analysis into routine clinical practice to enhance risk stratification and treatment planning for AML patients, as currently recommended by professional guidelines.
Oral Extraintestinal Manifestations of Inflammatory Bowel Disease: The Temporal Relationship Between Oral and Intestinal Symptoms
Loeb, Lauren , Janovska, Marketa , Ma, Yaohua , Rogers, Roy S., Farraye, Francis A. , Bruce, Alison J., Chedid, Victor , Kaur, Manreet , Bodiford, Katherine J., Hashash, Jana G. , Rogers, Roy, Bruce, Alison, Bodiford, Katherine, Chedid, Victor G , Farraye, Francis A , Hashash, Jana G

Mayo Clinic

Crohn's & Colitis 360 | March 31, 2025 | Volume: 7 | Issue: 2 | Pages: No page available

10.1093/crocol/otaf027 | PMID 40364799 Get It

Abstract Objectives Oral extraintestinal manifestations (OEIMs) of inflammatory bowel disease (IBD) may impact IBD treatment. The aims of this study were to: (1) determine which OEIMs are most prevalent among patients with IBD, (2) investigate the presence of a temporal association between GI luminal disease activity and OEIMs, and (3) determine how often changes in therapeutic management of IBD are needed in the presence of OEIMs. Study Design A retrospective cohort study was performed for adult patients with IBD evaluated between January 2017 and November 2021 with at least 1 oral complaint. Demographic data were collected from the charts of these patients. Kruskal-Wallis test for continuous measures and Fisher’s Exact test for categorical measures were used. Results A total of 116 patients with IBD who had presented with at least 1 oral finding during the study time period were identified. Aphthous ulcers were the most common oral presentation in both Crohn’s disease (CD) (85.1%) and ulcerative colitis (UC) (75.0%). OEIMs were associated with CD activity in the small intestine (P = .004) and colon (P &lt; .001). UC pancolitis was associated with OEIMs (P = .002). In 32.7% of patients, OEIMs led to either an increase in dose or frequency of IBD therapy. In an additional 16.4% of patients, new systemic agents were started because of the OEIMs. Conclusions This study provides evidence that patients with IBD may develop OEIMs synchronous with IBD flares and may require escalation of IBD therapy when OEIMs occur.
A 23‐year‐old woman with a headache and imbalance
Marcelis, Lukas , Folpe, Andrew, Gupta, Sounak , Zepeda‐Mendoza, Cinthya , Zepeda-Mendoza, Cinthya J

Mayo Clinic

Brain Pathology | March 30, 2025 | Volume: 35 | Issue: 5 | Pages: No page available

10.1111/bpa.70008 | PMID 40159593 Get It

Intrinsic properties of spinal motoneurons degrade ankle torque control in humans
Beauchamp, James A. , Khurram, Obaid U. , Negro, Francesco , Dewald, Julius P. A. , Pearcey, Gregory E P , Khurram, Obaid U , Negro, Francesco , Dewald, Julius P A , Heckman, C J

Mayo Clinic

The Journal of Physiology | March 30, 2025 | Volume: 603 | Issue: 8 | Pages: 2443-2463

10.1113/jp287446 | PMID 40153847 Get It

Abstract Motoneurons are the final common pathway for all motor commands and possess intrinsic electrical properties that must be tuned to control muscle across the full range of motor behaviours. Neuromodulatory input from the brainstem is probably essential for adapting motoneuron properties to match this diversity of motor tasks. A primary mechanism of this adaptation, control of dendritic persistent inward currents (PICs) in motoneurons by brainstem monoaminergic systems, generates both amplification and prolongation of synaptic inputs. While essential, there is an inherent tension between this amplification and prolongation. Although amplification by PICs allows for quick recruitment and acceleration of motoneuron discharge, PICs must be deactivated to derecruit motoneurons upon movement cessation. In contrast, during stabilizing or postural tasks, PIC‐induced prolongation of synaptic inputs is critical for sustained motoneuron discharge. Here, we designed two motor tasks that challenged the inhibitory control of PICs, generating unduly PIC prolongation that increases variability in human torque control. This included a paradigm combining a discrete motor task with a stabilizing task and another involving muscle length‐induced changes to the balance of excitatory and inhibitory inputs available for controlling PICs. We show that prolongation from PICs introduces difficulties in ankle torque control and that these difficulties are further degraded at shorter muscle lengths when PIC prolongation is greatest. These results highlight the necessity for inhibitory control of PICs and showcase issues introduced when inhibitory control is constrained. Our findings suggest that, like sensory systems, errors are inherent in motor systems. These errors are not due to problems in the perception of movement‐related sensory input but are embedded in the final stage of motor output. This has many implications relevant to clinical conditions (e.g. chronic stroke) where pathological shifts in monoamines may further amplify these errors. image Key points All motor commands are processed via spinal motoneurons, whose intrinsic electrical properties are adapted by brainstem neuromodulatory input. The effects of these neuromodulatory inputs (i.e. persistent inward currents; PICs) must be tightly regulated by inhibitory inputs to allow for the large repertoire of human motor behaviours. We designed two motor tasks to restrict the ability of inhibitory synaptic inputs to control PICs and show that this generates substantial errors that reduce the precision of motor output in humans. Our findings suggest that errors are inherent in motor systems and embedded in the final stage of motor output. This has many implications relevant to clinical conditions (e.g. chronic stroke) and may, speculatively, shed light on contributing factors to muscle cramps.
Postoperative Treatment Regimens in Patients With Native Valve Endocarditis due to Staphylococcus aureus Who Undergo Valve Replacement or Repair
Katragadda, Silpita , Baddour, Larry M. , Quintero-Martinez, Juan Andres , Bois, Melanie C. , O’Horo, John C. , Lahr, Brian D. , DeSimone, Daniel C. , Chesdachai, Supavit , Quintero-Martinez, Juan A , Bois, Melanie C , O'Horo, John C , Lahr, Brian , DeSimone, Daniel C , Baddour, Larry , Chesdachai, Supavit

Mayo Clinic

Open Forum Infectious Diseases | March 30, 2025 | Volume: 12 | Issue: 4 | Pages: No page available

10.1093/ofid/ofaf179 | PMID 40207048 Get It

Abstract Background There remains a lack of consensus regarding the postoperative treatment regimen in patients with native valve Staphylococcus aureus infective endocarditis who undergo surgical valve replacement or repair. Methods We conducted a multicenter retrospective review of patients with S aureus native valve endocarditis who underwent surgical valve replacement or repair at Mayo Clinic Enterprise (Minnesota, Florida, Arizona, and Mayo Clinic Health Systems) between 1 January 2012 and 31 December 2022. Postoperative treatment regimens were classified as either monotherapy with a methicillin-sensitive or methicillin-resistant S aureus active agent or combination therapy that included rifampin and/or gentamicin with either active agent. Results Of the 339 patients diagnosed with S aureus native valve endocarditis, 61 underwent surgical valve replacement or repair within the initial 6 weeks of antimicrobial therapy. A total of 12 (20.2%) patients died during the 1-year follow-up period. Between patients postoperatively treated with monotherapy (n = 33) and combination therapy (n = 28), a propensity score–weighted analysis revealed that combination therapy was associated with increased risk of 1-year mortality (P = .039), 6-month relapse (P = .016), and treatment-related adverse events (P &lt; .001). Conclusions Among patients treated for native valve infective endocarditis caused by S aureus after valvular surgical intervention, all study outcomes—adverse events and drug-drug interactions, 6-month infective endocarditis relapse, and 1-year mortality—were higher in the combination therapy group than the monotherapy group.
Women Physicians in Leadership Roles in Critical Care Medicine or Academic Medicine—A Systematic Literature Review
Siddiqui, Shahla , Gali, Bhargavi , Cotter, Elizabeth , Short, Margo, McNichol, Megan , Mulaikal, Teresa A., Cassavaugh, Jessica , Chow, Jarva, Russell, Cortessa, Golhar, Shweta Yemul, Ben-Jacob, Talia K., Siddiqui, Shahla

Mayo Clinic

Critical Care Explorations | March 30, 2025 | Volume: 7 | Issue: 4 | Pages: e1249

10.1097/cce.0000000000001249 | PMID 40153554 Get It

OBJECTIVE: To systematically review and synthesize the evidence surrounding factors impacting women rising to leadership positions in critical care medicine (CCM). DATA SOURCES: PubMed, Embase, Web of Science, and Cochrane Library from 2011 to 2024. STUDY SELECTION: Articles included were cohort studies, surveys, and interviews addressing women physicians practicing in CCM and related fields of academic medicine. DATA EXTRACTION: Causes of not rising to leadership among women were extracted and tabulated along with other pertinent study characteristics. DATA SYNTHESIS: The database searches generated 892 records. Thirty-nine studies met inclusion criteria for data extraction. The included articles represented seven countries, with 30 studies originating in the United States. Only two studies were from CCM, whereas others addressed leadership in other academic and clinical fields of medicine, medical journals, and societies and medical faculty. Twenty-six studies were qualitative, observational studies; five were survey based and eight included interviews. Using thematic analysis, the following five domains emerged: pipeline issues, lack of opportunities, lack of self-efficacy, lack of mentorship, and sustaining women in leadership. CONCLUSIONS: While the satisfaction rates of women in CCM were high, challenges remain for women to obtain leadership opportunities. A culture of support could better nurture and sustain women in leadership roles. More CCM-focused gender bias research is needed. Future targets for interventions include gender bias training, awareness, and developing strategies to break through the cycle of gender preferential promotions in CCM.