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9376 citation(s) found for "Ly, Thomas".

Genetic Variation in the One-Carbon Transfer Pathway and Ovarian Cancer Risk
Kelemen, Linda E. , Sellers, Thomas A. , Schildkraut, Joellen M. , Cunningham, Julie M. , Vierkant, Robert A. , Pankratz, V. Shane , Fredericksen, Zachary S., Gadre, Madhura K., Rider, David N., Liebow, Mark , Goode, Ellen L. , Vierkant, Robert A

Cancer Research | April 1, 2008 | Volume: 68 | Issue: 7 | Pages: 2498-2506

10.1158/0008-5472.can-07-5165 | PMID 18381459 Get It

Abstract Dysfunction in enzymes involved in one-carbon (1-C) metabolism can lead to increased chromosomal strand breaking and abnormal methylation patterns, which are both associated with cancer risk. Availability of 1-C units may modify risk. We investigated the association of single-nucleotide polymorphisms (SNP) in 21 genes in the 1-C transfer pathway among 829 Caucasian cases with primary epithelial ovarian cancer and 941 frequency-matched unaffected controls enrolled at Mayo Clinic (Rochester, MN) and Duke University (Durham, NC) and examined risk modification by multivitamin supplement use. Multivariable-adjusted SNP-specific logistic regression and haplotype analyses were done for 180 SNPs and false positive report probabilities (FPRP) were calculated. Each copy of the minor allele in SHMT1 intron 5 A>G (rs9909104) was associated with epithelial ovarian cancer [odds ratio (OR), 1.2; 95% confidence interval (95% CI), 1.0–1.4; P trend = 0.02; FPRP = 0.16] and a 5-SNP SHMT1 haplotype was associated with decreased risk (P = 0.01; FPRP = 0.09). Three SNPs in DNMT3A were associated with risk among multivitamin supplement users: 3′ untranslated region (UTR) C>G (rs13420827: OR, 0.8; 95% CI, 0.6–1.0; P interaction = 0.006; FPRP = 0.54), intron 6 G>A (rs11887120: OR, 0.8; 95% CI, 0.7–1.0; P interaction = 0.007; FPRP = 0.57), and intron 22 A>T (rs11695471: OR, 1.2; 95% CI, 1.0–1.5; P interaction = 0.01; FPRP = 0.66). These data extend previous findings from other cancers of a role for SHMT1 in ovarian cancer, and provide evidence that SNPs in methylation and DNA synthesis reactions are associated with risk of ovarian cancer. Interventions with modifiable factors such as multivitamin intake may reduce risk. [Cancer Res 2008;68(7):2498–506]
Contrasting the Neurologic Complications of Cardiac Transplantation in Adults and Children
Mayer, Thomas O., Biller, José , O’Donnell, Jacqueline, Sokol, Deborah K. , Meschia, James F.

Journal of Child Neurology | March 31, 2008 | Volume: 17 | Issue: 3 | Pages: 195-199

10.1177/088307380201700308 | PMID 12026235 Get It

The objective of this study was to evaluate neurologic complications associated with cardiac transplantation and compare the neurologic complications seen in adults and children. As advances in immunology have led to longer survival times for cardiac transplant recipients (1- and 5-year survival rates have improved to 86% and 65%, respectively), a number of neurologic complications have emerged. We performed a 14-year retrospective review of all adults and children (<18 years old) who had orthotopic cardiac transplantation at either Indiana University Hospital or James Whitcomb Riley Hospital for Children. The rates of neurologic complications involving the central and peripheral nervous systems in adults and children were assessed for differences using the chi-square test and Fisher's exact test where appropriate. A total of 191 orthotopic cardiac transplants were performed from 1986 to 2000, with follow-up available for 184, including 107 adults and 77 children. Thirty-two of 107 (30%) adults experienced a total of 47 complications, with peripheral neuropathies being the most frequent complication. Eighteen of 77 (23%) children experienced a total of 22 complications, with seizures being the most frequent complication. Other complications occurring in both groups were cerebrovascular, infectious, encephalopathies, neoplasms, and "other." Neurologic complications in children and adults after orthotopic cardiac transplantation are similar in both incidence and type. However, peripheral neuropathies tend to occur more frequently in adults than in children (P = .04), and the types of complications in the immediate post-transplant period seem to differ. (J Child Neurol 2002;17:195-199).
B7-H1 Expression in Wilms Tumor: Correlation With Tumor Biology and Disease Recurrence
Routh, Jonathan C. , Ashley, Richard , Sebo, Thomas J., Lohse, Christine M. , Husmann, Douglas A. , Kramer, Stephen A., Kwon, Eugene D., Routh, Jonathan C

Journal of Urology | March 21, 2008 | Volume: 179 | Issue: 5 | Pages: 1954-1960

10.1016/j.juro.2008.01.056 | PMID 18355839 Get It

Postoperative Evaluation of the Total Ankle Arthroplasty
Peterson, Jeffrey J., DeOrio, James K. , Bancroft, Laura W. , Berquist, Thomas H., Kransdorf, Mark J. , Bestic, Joseph M.

American Journal of Roentgenology | March 20, 2008 | Volume: 190 | Issue: 4 | Pages: 1112-1123

10.2214/ajr.07.2729 | PMID 18356463 Get It

Targeting NF-κB in Waldenstrom macroglobulinemia
Leleu, Xavier , Eeckhoute, Jérôme , Jia, Xiaoying , Roccaro, Aldo M. , Moreau, Anne-Sophie, Sacco, Antonio , Ngo, Hai T., Runnels, Judith, Melhem, Molly, Burwick, Nicolas, Azab, Abdelkareem, Azab, Feda, Hunter, Zachary R. , Hatjiharissi, Evdoxia , Carrasco, Daniel R., Hideshima, Teru , Brown, Myles , Farag, Mena S. , Treon, Steven P. , Witzig, Thomas E. , Anderson, Kenneth C. , Ghobrial, Irene M. , Roccaro, Aldo M , Hunter, Zachary R , Brown, Myles

Blood | March 12, 2008 | Volume: 111 | Issue: 10 | Pages: 5068-5077

10.1182/blood-2007-09-115170 | PMID 18334673 Get It

Abstract The nuclear factor-κB (NF-κB) path-way has been implicated in tumor B-cell survival, growth, and resistance to therapy. Because tumor cells overcome single-agent antitumor activity, we hypothesized that combination of agents that target differentially NF-κB pathway will induce significant cytotoxicity. Therapeutic agents that target proteasome and Akt pathways should induce significant activity in B-cell malignancies as both pathways impact NF-κB activity. We demonstrated that perifosine and bortezomib both targeted NF-κB through its recruitment to the promoter of its target gene IκB using chromatin immunoprecipitation assay. This combination led to synergistic cytotoxicity in Waldenstrom macroglobulinemia (WM) cells that was mediated through a combined reduction of the PI3K/Akt and ERK signaling pathways, found to be critical for survival of WM cells. Moreover, a combination of these drugs with the CD20 monoclonal antibody rituximab further increased their cytotoxic activity. Thus, effective WM therapy may require combination regimens targeting the NF-κB pathway.
Alzheimer's disease is associated with reduced expression of energy metabolism genes in posterior cingulate neurons
Liang, Winnie S. , Reiman, Eric M. , Valla, Jon, Dunckley, Travis , Beach, Thomas G. , Grover, Andrew, Niedzielko, Tracey L., Schneider, Lonnie , Mastroeni, Diego , Caselli, Richard J. , Kukull, Walter A. , Morris, John C. , Hulette, Christine M., Schmechel, Donald E., Rogers, Joseph, Stephan, Dietrich A. , Morris, John C

Proceedings of the National Academy of Sciences | March 10, 2008 | Volume: 105 | Issue: 11 | Pages: 4441-4446

10.1073/pnas.0709259105 | PMID 18332434 Get It

Alzheimer's disease (AD) is associated with regional reductions in fluorodeoxyglucose positron emission tomography (FDG PET) measurements of the cerebral metabolic rate for glucose, which may begin long before the onset of histopathological or clinical features, especially in carriers of a common AD susceptibility gene. Molecular evaluation of cells from metabolically affected brain regions could provide new information about the pathogenesis of AD and new targets at which to aim disease-slowing and prevention therapies. Data from a genome-wide transcriptomic study were used to compare the expression of 80 metabolically relevant nuclear genes from laser-capture microdissected non-tangle-bearing neurons from autopsy brains of AD cases and normal controls in posterior cingulate cortex, which is metabolically affected in the earliest stages; other brain regions metabolically affected in PET studies of AD or normal aging; and visual cortex, which is relatively spared. Compared with controls, AD cases had significantly lower expression of 70% of the nuclear genes encoding subunits of the mitochondrial electron transport chain in posterior cingulate cortex, 65% of those in the middle temporal gyrus, 61% of those in hippocampal CA1, 23% of those in entorhinal cortex, 16% of those in visual cortex, and 5% of those in the superior frontal gyrus. Western blots confirmed underexpression of those complex I–V subunits assessed at the protein level. Cerebral metabolic rate for glucose abnormalities in FDG PET studies of AD may be associated with reduced neuronal expression of nuclear genes encoding subunits of the mitochondrial electron transport chain.
Use of IGHV3–21 in chronic lymphocytic leukemia is associated with high-risk disease and reflects antigen-driven, post–germinal center leukemogenic selection
Jain, Sonia , Widhopf, George F., Rassenti, Laura Z., Keating, Michael J. , Wierda, William G. , Brown, Jennifer R. , Rai, Kanti R., Byrd, John C. , Greaves, Andrew, Byrd, John C. , Ghia, Emanuela M. , Gribben, John G. , Rai, Kanti R., Kay, Neil E. , Kipps, Thomas J. , Byrd, John C

Blood | March 8, 2008 | Volume: 111 | Issue: 10 | Pages: 5101-5108

10.1182/blood-2007-12-130229 | PMID 18326815 Get It

AbstractWe examined the chronic lymphocytic leukemia (CLL) cells of 2457 patients evaluated by the CLL Research Consortium (CRC) and found that 63 (2.6%) expressed immunoglobulin (Ig) encoded by the Ig heavy-chain-variable-region gene (IGHV), IGHV3-21. We identified the amino acid sequence DANGMDV (motif-1) or DPSFYSSSWTLFDY (motif-2) in the Ig heavy-chain (IgH) third complementarity-determining region (HCDR3) of IgH, respectively, used by 25 or 3 cases. The IgH with HCDR3 motif-1 or motif-2, respectively, was paired with Ig light chains (IgL) encoded by IGLV3-21 or IGKV3-20, suggesting that these Ig had been selected for binding to conventional antigen(s). Cases that had HCDR3 motif-1 had a median time from diagnosis to initial therapy comparable with that of cases without a defined HCDR3 motif, as did cases that used mutated IGHV3-21 (n = 27) versus unmutated IGHV3-21 (n = 30). Of 7 examined cases that used Ig encoded by IGHV3-21/IGLV3-21, we found that 5 had a functionally rearranged IGKV allele that apparently had incurred antigendriven somatic mutations and subsequent rearrangement with KDE. This study reveals that CLL cells expressing IGHV3-21/IGLV3-21 most likely were derived from B cells that had experienced somatic mutation and germinal-center maturation in an apparent antigen-driven immune response before undergoing Ig-receptor editing and after germinal-center leukemogenic selection.
Assessing the Value of Reflex Fluorescence In Situ Hybridization Testing in the Diagnosis of Bladder Cancer When Routine Urine Cytological Examination is Equivocal
Kipp, Benjamin R. , Halling, Kevin C. , Campion, Michael B., Wendel, Amy J., Karnes, R. Jeffrey , Sebo, Thomas J., Zhang, Jun

Journal of Urology | March 6, 2008 | Volume: 179 | Issue: 4 | Pages: 1296-1301

10.1016/j.juro.2007.11.082 | PMID 18289582 Get It

The Effect of Deep-Tissue Massage Therapy on Blood Pressure and Heart Rate
Kaye, Aaron J. , Swinford, Jan, Baluch, Amir, Bawcom, Brad A., Lambert, T, Hoover, Jason M. , Kaye, Alan D. , Bawcom, Brad A, Lambert, Thomas

The Journal of Alternative and Complementary Medicine | March 3, 2008 | Volume: 14 | Issue: 2 | Pages: 125-128

10.1089/acm.2007.0665 | PMID 18315516 Get It