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2501 citation(s) found for "Voß, Benjamin".

PIK3CA Gene Mutations in Pediatric and Adult Glioblastoma Multiforme
Gallia, Gary L. , Rand, Vikki , Siu, I‐Mei, James, C. David , Marie, Suely Kazue Nagahashi , Oba‐Shinjo, Sueli Mieko , Carlotti, Carlos Gilberto , Caballero, Otávia L., Simpson, Andrew J.G., Brock, Malcolm V., Massion, Pierre P. , Carson, Benjamin S., Riggins, Gregory J. , Eberhart, Charles G.

Molecular Cancer Research | October 18, 2006 | Volume: 4 | Issue: 10 | Pages: 709-714

10.1158/1541-7786.mcr-06-0172 | PMID 17050665 Get It

Abstract The phosphatidylinositol 3-kinases (PI3K) are a family of enzymes that relay important cellular growth control signals. Recently, a large-scale mutational analysis of eight PI3K and eight PI3K-like genes revealed somatic mutations in PIK3CA, which encodes the p110α catalytic subunit of class IA PI3K, in several types of cancer, including glioblastoma multiforme. In that report, 4 of 15 (27%) glioblastomas contained potentially oncogenic PIK3CA mutations. Subsequent studies, however, showed a significantly lower mutation rate ranging from 0% to 7%. Given this disparity and to address the relation of patient age to mutation frequency, we examined 10 exons of PIK3CA in 73 glioblastoma samples by PCR amplification followed by direct DNA sequencing. Overall, PIK3CA mutations were found in 11 (15%) samples, including several novel mutations. PIK3CA mutations were distributed in all sample types, with 18%, 9%, and 13% of primary tumors, xenografts, and cell lines containing mutations, respectively. Of the primary tumors, PIK3CA mutations were identified in 21% and 17% of pediatric and adult samples, respectively. No evidence of PIK3CA gene amplification was detected by quantitative real-time PCR in any of the samples. This study confirms that PIK3CA mutations occur in a significant number of human glioblastomas, further indicating that therapeutic targeting of this pathway in glioblastomas is of value. Moreover, this is the first study showing PIK3CA mutations in pediatric glioblastomas, thus providing a molecular target in this important pediatric malignancy. (Mol Cancer Res 2006;4(10):709–14)
An X-band hybrid MIC feedforward amplifier for low residual noise operation
Соколов, В. А. , Kruchowski, James, Vickberg, M., Buhrow, Benjamin , Schuster, S.E., Bublitz, J., Gilbert, Barry K., Daniel, Erik S.

IEEE MTT-S International Microwave Symposium Digest, 2005. | October 11, 2006 | Volume: No volume available | Issue: No issue available | Pages: 2039-2042

10.1109/mwsym.2005.1517146 Get It

Increased Fibroblast Growth Factor-Inducible 14 Expression Levels Promote Glioma Cell Invasion via Rac1 and Nuclear Factor-κB and Correlate with Poor Patient Outcome
Tran, Nhan L. , McDonough, Wendy S., Savitch, Benjamin A., Ensign, Shannon P. Fortin , Winkles, Jeffrey A. , Symons, Marc , Cunliffe, Heather E. , Hoelzinger, Dominique B. , Rennert, Jessica L., Burkly, Linda C. , Loftus, Joseph C. , Ensign, Shannon P. Fortin , Nakada, Mitsutoshi , Hostetter, Galen H. , Michaelson, Jennifer S. , Lipinski, Christopher A. , Mariani, Luigi , Berens, Michael E. , Tran, Nhan L

Cancer Research | October 3, 2006 | Volume: 66 | Issue: 19 | Pages: 9535-9542

10.1158/0008-5472.can-06-0418 | PMID 17018610 Get It

Abstract Glial tumors progress to malignant grades by heightened proliferation and relentless dispersion throughout the central nervous system. Understanding genetic and biochemical processes that foster these behaviors is likely to reveal specific and effective targets for therapeutic intervention. Our current report shows that the fibroblast growth factor-inducible 14 (Fn14), a member of the tumor necrosis factor (TNF) receptor superfamily, is expressed at high levels in migrating glioma cells in vitro and invading glioma cells in vivo. Forced Fn14 overexpression stimulates glioma cell migration and invasion, and depletion of Rac1 by small interfering RNA inhibits this cellular response. Activation of Fn14 signaling by the ligand TNF-like weak inducer of apoptosis (TWEAK) stimulates migration and up-regulates expression of Fn14; this TWEAK effect requires Rac1 and nuclear factor-κB (NF-κB) activity. The Fn14 promoter region contains NF-κB binding sites, which mediate positive feedback causing sustained overexpression of Fn14 and enduring glioma cell invasion. Furthermore, Fn14 gene expression levels increase with glioma grade and inversely correlate with patient survival. These results show that the Fn14 cascade operates as a positive feedback mechanism for elevated and sustained Fn14 expression. Such a feedback loop argues for aggressive targeting of the Fn14 axis as a unique and specific driver of glioma malignant behavior. (Cancer Res 2006; 66(19): 9535-42)
Impact of Transforming Growth Factor-β1 on Atrioventricular Node Conduction Modification by Injected Autologous Fibroblasts in the Canine Heart
Bunch, T. Jared , Mahapatra, Srijoy, Bruce, G. Keith, Johnson, Susan B., Miller, Dylan V. , Horne, Benjamin D. , Wang, Xiao-Li, Lee, Hon-Chi, Caplice, Noel M. , Packer, Douglas L. , Wang, Shaohua , Wang, Xiao-Li

Circulation | May 23, 2006 | Volume: 113 | Issue: 21 | Pages: 2485-2494

10.1161/circulationaha.105.570796 | PMID 16717152 Get It

Background— Atrioventricular (AV) nodal ablation for management of atrial fibrillation (AF) is irreversible and requires permanent pacemaker implantation. We hypothesized that as an alternative, implantation of autologous fibroblasts in the perinodal region would focally modify AV nodal conduction and that this modulation would be enhanced by pretreatment with transforming growth factor-β1 (TGF-β1), a stimulant of fibroblasts. Methods and Results— Skin biopsies were taken from 12 mongrel dogs, and derived fibroblasts were dissociated and grown in culture for 2 weeks. Multiple injections (0.25 mL) were made through an 8F NOGA catheter along the fast/slow AV nodal pathways as guided by an electroanatomic mapping system. Seven dogs received fibroblasts alone (1×10 6 cells/mL), 7 dogs received TGF-β1 (5 μg), 4 dogs received fibroblasts and TGF-β1 (1×10 6 cells/mL+5 μg), and 4 dogs received saline only. AV node function was assessed at baseline and after 4 weeks. Saline (80 mL) with assigned therapy (0.25 mL per injection) was injected into the peri-AV nodal region in each dog. At baseline, the AH interval (66±3 ms) and the average RR interval (331±17 ms) in pacing-induced AF were similar in each cohort. The increase in AH interval in normal sinus rhythm was longer after fibroblast (23±4 versus 5±5 ms; P =0.05) and fibroblast plus TGF-β1 (50±5 versus 5±5 ms; P <0.001) injections than with saline alone, with similar findings during high right atrium and distal coronary sinus pacing. The AH interval was not significantly increased after TGF-β1 injections. The AH interval was significantly longer after fibroblast plus TGF-β1 injections than with either therapy (TGF-β1 or fibroblasts) alone. The RR interval during AF was increased in dogs that received fibroblasts alone (110±36 versus −41±34 ms) and to a greater extent with the addition of TGF-β1 (294±108 versus −41±34 ms). No AV block was seen in any cohort at 4 weeks. Labeled fibroblasts that expressed vimentin were identified in all dogs that received cell injections at 4 weeks. Conclusions— AV nodal modification can be achieved with injected fibroblasts without the creation of AV block. The effect on AV node conduction is substantially enhanced by pretreatment of fibroblasts with TGF-β1. These data have therapeutic potential for the management of rapid ventricular rate during AF without pacemaker implantation.
Chromatin Assembly Factor 1 Interacts with Histone H3 Methylated at Lysine 79 in the Processes of Epigenetic Silencing and DNA Repair
Zhou, Hui , Muddiman, David C. , Madden, Benjamin J. , Zhang, Zhiguo

Biochemistry | February 28, 2006 | Volume: 45 | Issue: 9 | Pages: 2852-2861

10.1021/bi0521083 | PMID 16503640 Get It

Genetic Association Analysis of Functional Impairment in Chronic Obstructive Pulmonary Disease
DeMeo, Dawn L. , Lazarus, Ross , Celedón, Juan C. , Raby, Benjamin A. , Benditt, Joshua O., Scanlon, Paul D., Sciurba, Frank C. , Utz, James P., Reilly, John J. , Silverman, Edwin K. , Hersh, Craig P. , Criner, Gerard J. , Make, Barry J. , Martínez, Fernando J. , Celedón, Juan C

American Journal of Respiratory and Critical Care Medicine | February 2, 2006 | Volume: 173 | Issue: 9 | Pages: 977-984

10.1164/rccm.200509-1452oc | PMID 16456143 Get It

Abstract Rationale Patients with severe chronic obstructive pulmonary disease (COPD) may have varying levels of disability despite similar levels of lung function. This variation may reflect different COPD subtypes, which may have different genetic predispositions. Objectives To identify genetic associations for COPD-related phenotypes, including measures of exercise capacity, pulmonary function, and respiratory symptoms. Methods In 304 subjects from the National Emphysema Treatment Trial, we genotyped 80 markers in 22 positional and/or biologically plausible candidate genes. Regression models were used to test for association, using a test–replication approach to guard against false-positive results. For significant associations, effect estimates were recalculated using the entire cohort. Positive associations with dyspnea were confirmed in families from the Boston Early-Onset COPD Study. Results The test–replication approach identified four genes—microsomal epoxide hydrolase (EPHX1), latent transforming growth factor-β binding protein-4 (LTBP4), surfactant protein B (SFTPB), and transforming growth factor-β1 (TGFB1)—that were associated with COPD-related phenotypes. In all subjects, single-nucleotide polymorphisms (SNPs) in EPHX1 (p ⩽ 0.03) and in LTBP4 (p ⩽ 0.03) were associated with maximal output on cardiopulmonary exercise testing. Markers in LTBP4 (p ⩽ 0.05) and SFTPB (p = 0.005) were associated with 6-min walk test distance. SNPs in EPHX1 were associated with carbon monoxide diffusing capacity (p ⩽ 0.04). Three SNPs in TGFB1 were associated with dyspnea (p ⩽ 0.002), one of which replicated in the family study (p = 0.02). Conclusions Polymorphisms in several genes seem to be associated with COPD-related traits other than FEV1. These associations may identify genes in pathways important for COPD pathogenesis.
In Vivo Temperature Mapping of Prostate during Treatment with TherMatrx TMx-2000 Device: Heat Field and MRI Determinations of Necrotic Lesions
Larson, Benjamin T., Huidobro, Christian, Acevedo, Cristián , Busel, David, Mynderses, Lance, Collins, Joseph M. , Larson, Thayne R.

Journal of Endourology | October 27, 2005 | Volume: 19 | Issue: 8 | Pages: 1021-1025

10.1089/end.2005.19.1021 | PMID 16253074 Get It

Accurate mass precursor ion data and tandem mass spectrometry identify a class I human leukocyte antigen A*0201-presented peptide originating from vaccinia virus
Johnson, Kenneth L. , Ovsyannikova, Inna G. , Muddiman, David C. , Madden, Benjamin J. , Poland, Gregory A.

Journal of the American Society for Mass Spectrometry | September 27, 2005 | Volume: 16 | Issue: 11 | Pages: 1812-1817

10.1016/j.jasms.2005.07.015 | PMID 16185891 Get It

Mapping Sites of Protein Phosphorylation by Mass Spectrometry Utilizing a Chemical-Enzymatic Approach:  Characterization of Products from α-S1Casein Phosphopeptides
Muddiman, David C. , McCormick, Daniel , Holmes, Michael W.R. , Madden, Benjamin J.

Journal of Proteome Research | April 11, 2005 | Volume: 4 | Issue: 2 | Pages: 424-434

10.1021/pr049804u | PMID 15822919 Get It

Heat shock protein 90 inhibition sensitizes acute myelogenous leukemia cells to cytarabine
Loegering, David A., Powell, Heather L., Flatten, Karen S., Arlander, Sonnet J.H., Dai, Nga T., Heldebrant, Michael P., Vroman, Benjamin T., Karp, Judith E. , Eyck, Cynthia J. Ten, Erlichman, Charles , Karnitz, Larry M., Mesa, Ruben A. , Smith, B. Douglas , Eyck, Cynthia Ten, Kaufmann, Scott H.

Blood | March 23, 2005 | Volume: 106 | Issue: 1 | Pages: 318-327

10.1182/blood-2004-09-3523 | PMID 15784732 Get It

Previous studies demonstrated that ataxia telangiectasia mutated– and Rad3-related (ATR) kinase and its downstream target checkpoint kinase 1 (Chk1) facilitate survival of cells treated with nucleoside analogs and other replication inhibitors. Recent results also demonstrated that Chk1 is depleted when cells are treated with heat shock protein 90 (Hsp90) inhibitor 17-allylamino-17-demethoxygeldanamycin (17-AAG). The present study examined the effects of 17-AAG and its major metabolite, 17-aminogeldanamycin (17-AG), on Chk1 levels and cellular responses to cytarabine in human acute myelogenous leukemia (AML) cell lines and clinical isolates. Cytarabine, at concentrations as low as 30 nM, caused activating phosphorylation of Chk1, loss of the phosphatase Cdc25A, and S-phase slowing. Conversely, treatment with 100 to 300 nM 17-AAG for 24 hours caused Chk1 depletion that was accompanied by diminished cytarabine-induced S-phase accumulation, decreased Cdc25A degradation, and enhanced cytotoxicity as measured by inhibition of colony formation and induction of apoptosis. Additional studies demonstrated that small inhibitory RNA (siRNA) depletion of Chk1 also sensitized cells to cytarabine, whereas disruption of the phosphatidylinositol 3-kinase (PI3k) signaling pathway, which is also blocked by Hsp90 inhibition, did not. Collectively, these results suggest that treatment with 17-AAG might represent a means of reversing checkpoint-mediated cytarabine resistance in AML.