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2412 citation(s) found for "Yu, Jason W".

Relationship of BMPR2 Mutations to Vasoreactivity in Pulmonary Arterial Hypertension
Elliott, C. Gregory , Glissmeyer, Eric W. , Havlena, Gregory T., Carlquist, John F., McKinney, Jason T., Rich, Stuart , McGoon, Michael D., Scholand, Mary Beth , Kim, Miryoung, Jensen, Robert L., Schmidt, Jon W., Ward, Kenneth, Havlena, Gregory T.

Circulation | May 22, 2006 | Volume: 113 | Issue: 21 | Pages: 2509-2515

10.1161/circulationaha.105.601930 | PMID 16717148 Get It

Background— Vasoreactivity tests are fundamental in evaluating pulmonary arterial hypertension (PAH). Mutations of the transforming growth factor-β type II receptor gene, BMPR2 , predispose to the development of pulmonary hypertension and may alter the response to vasodilators. Previous investigations have not examined the relationship of BMPR2 mutations to vasoreactivity. Methods and Results— We identified 133 consecutive unrelated patients with either idiopathic or familial PAH. Sixty-six patients were excluded because we lacked either DNA samples (n=18) or complete data from a vasoreactivity test (n=48). The remaining 67 patients were screened for BMPR2 DNA sequence variations, and specific variations were confirmed by gene sequencing. The vasoreactivity of patients with nonsynonymous BMPR2 variations was compared with that of patients without nonsynonymous BMPR2 variations. We found nonsynonymous BMPR2 variations in 27 of 67 patients with idiopathic (n=16 of 52) or familial (n=11 of 15) PAH. Vasoreactivity was identified in 3.7% of 27 patients with nonsynonymous BMPR2 variations and in 35% of 40 patients without nonsynonymous BMPR2 variations ( P =0.003). Five of the 27 nonsynonymous variations occur commonly in healthy individuals. None of the remaining 22 patients with BMPR2 variations demonstrated vasoreactivity, and the analysis remained unchanged when we assumed that nonsynonymous BMPR2 variations were present in all 15 patients with familial PAH. Conclusions— Patients with familial or idiopathic PAH and nonsynonymous BMPR2 variations are unlikely to demonstrate vasoreactivity. Further trials are required to determine whether long-term therapy can be directed by tests for BMPR2 variations.
Standard Chemotherapy Compared With High-Dose Chemoradiotherapy for Multiple Myeloma: Final Results of Phase III US Intergroup Trial S9321
Barlogie, Bart , Kyle, Robert A. , Greipp, Philip R., Hurd, David D., McCoy, Jason , Moore, Dennis F., Dakhil, Shaker R. , Lanier, Keith S., Chapman, Robert, Cromer, Jeana, Salmon, Sydney E., Durie, Brian G.M. , Crowley, John C., Anderson, Kenneth C. , Lazarus, Hillard M.

Journal of Clinical Oncology | January 23, 2006 | Volume: 24 | Issue: 6 | Pages: 929-936

10.1200/jco.2005.04.5807 | PMID 16432076 Get It

Purpose Results of a prospective randomized trial conducted by the Intergroupe Francais du Myélome (IFM 90) indicated that autologous hematopoietic cell–supported high-dose therapy (HDT) effected higher complete response rates and extended progression-free survial (PFS) and overall survival (OS) compared with standard-dose therapies (SDT) for patients with multiple myeloma (MM). Patients and Methods In 1993, three North American cooperative groups launched a prospective randomized trial (S9321) comparing HDT (melphalan [MEL] 140 mg/m 2 plus total-body irradiation 12 Gy) with SDT using the vincristine, carmustine, MEL, cyclophosphamide, and prednisone regimen. Responders on both arms (≥ 75%) were randomly assigned to interferon (IFN) or no maintenance treatment. Results With a median follow-up time of 76 months, no differences were observed in response rates between the two study arms (HDT, n = 261 patients; SDT, n = 255 patients). Similarly, PFS and OS durations did not differ between the HDT and SDT arms, with 7-year estimates of PFS of 17% and 16%, respectively, and OS of 37% and 42%, respectively. Of 242 patients achieving at least 75% tumor reduction, no difference was observed in PFS or OS among the 121 patients randomly assigned to IFN and the 121 patients randomly assigned to no maintenance therapy. Among 157 patients relapsing on SDT, 87 received a salvage autotransplantation; their median survival time of 30 months was only slightly better than the survival time of the remaining patients who were managed with further SDT (23 months; P = .13). Conclusion The HDT and SDT regimens used in S9321 yielded comparable response rates and PFS and OS durations. IFN maintenance therapy did not benefit patients who achieved ≥ 75% tumor reduction on either arm.
Polyphasic Characterization Reveals that the Human Pathogen Mycobacterium peregrinum Type II Belongs to the Bovine Pathogen Species Mycobacterium senegalense
Wallace, Richard J. , Brown‐Elliott, Barbara A. , Brown, June M., Steigerwalt, Arnold G., Hall, Leslie, Woods, Gail L. , Cloud, Joann L. , Mann, Linda, Wilson, Rebecca W., Crist, Christopher J., Jost, Kenneth, Byrer, Dorothy E., Tang, Jane, Cooper, Jason, Stamenova, Elena K., Campbell, Brian A., Wolfe, Joyce, Turenne, Christine Y. , Turenne, Christine Y

Journal of Clinical Microbiology | December 6, 2005 | Volume: 43 | Issue: 12 | Pages: 5925-5935

10.1128/jcm.43.12.5925-5935.2005 | PMID 16333077 Get It

ABSTRACT Mycobacterium peregrinum consists of two taxa: types I and II. We evaluated 43 clinical type II strains from throughout the United States. They were responsible for soft-tissue and bone infections, catheter-related infections, and possible pneumonitis. By carbohydrate utilization, they were indistinguishable from type I strains, being d -mannitol and trehalose positive. However, they had a distinct susceptibility pattern that included intermediate ciprofloxacin MICs but low clarithromycin and doxycycline MICs of ≤1 μg/ml. These features were also shared by reference isolates of Mycobacterium senegalense from African bovine cases of “farcy.” By 16S rRNA gene sequencing, the type II isolates shared 100% sequence identity with M. senegalense . Partial sequencing of the type II hsp65 gene (441 bp) revealed four sequevars showing ≥98.4% identity with each other and ≥98.6% identity with the sequence of five bovine strains of M. senegalense . There was ≤97.1% identity with M. peregrinum type I isolates and other Mycobacterium fortuitum group species. Sequencing of additional gene targets including the 16S-23S rDNA internal transcribed spacer region and the rpoB gene (partial sequence) revealed a similar phylogenetic grouping. DNA-DNA hybridization showed 76 to 99% relatedness between the bovine and human strains. These studies demonstrate that type II isolates are not isolates of M. peregrinum but represent human strains of M. senegalense . This study is the first to demonstrate this species as a human pathogen. Representative human M. senegalense strains include ATCC 35755 and newly submitted strains ATCC BAA-849, ATCC BAA-850, and ATCC BAA-851.
Mutations in the Tyrosine Kinase Domain of the Epidermal Growth Factor Receptor in Non–Small Cell Lung Cancer
Yang, Sei Hoon , Mechanic, Leah E. , Landi, Maria Teresa , Bowman, Elise D. , Wampfler, Jason A. , Hong, Kyeong Man, Mann, Felicia, Dracheva, Tatiana, Fukuoka, Junya , Caporaso, Neil E. , Harris, Curtis C. , Jen, Jin , Yang, Ping , Meerzaman, Daoud , Travis, William D.

Clinical Cancer Research | September 21, 2005 | Volume: 11 | Issue: 6 | Pages: 2106-2110

10.1158/1078-0432.ccr-04-1853 | PMID 15788655 Get It

Abstract We evaluated somatic genetic alterations in the kinase domain of the EGFR gene in the tumors of 219 non–small cell lung cancer patients of primarily Caucasian and African American origins. We identified 26 patients (12%) whose tumors had a mutation in the EGFR gene, and 11 (5%) patients carried novel genomic variations consistent with germ-line polymorphisms. All but one mutation were identified in Caucasian patients affected with adenocarcinoma. EGFR mutations were more frequent in women and in nonsmokers, but a significant portion of the affected patients were men (12 of 26) and current or past smokers accounted for half of the patients affected (13 of 26). Screening subjects with EGFR mutations may identify patients whose tumors could respond to targeted therapy using tyrosine kinase inhibitors.
Clinicopathologic and Genetic Profile of Intracranial Marginal Zone Lymphoma: A Primary Low-Grade CNS Lymphoma That Mimics Meningioma
Judkins, Alexander R. , Schwalb, Jason M. , Yachnis, Anthony T. , Burger, Peter C. , Scheithauer, Bernd W., Perry, Arie , Tu, Pang‐Hsien , Giannini, Caterina , Burack, Richard , O’Neill, Brian Patrick , Perry, Arie

Journal of Clinical Oncology | July 12, 2005 | Volume: 23 | Issue: 24 | Pages: 5718-5727

10.1200/jco.2005.17.624 | PMID 16009945 Get It

PurposeAlthough rare overall, marginal zone B-cell lymphoma (MZBCL) is the most common primary low-grade CNS lymphoma reported in the literature. The aim of this study is to elucidate the biology and genetic features of this unusual tumor.Patients and MethodsFifteen CNS MZBCLs were studied clinically, pathologically, and genetically, including fluorescent in situ hybridization analyses with commercially available MALT1 and IgH break-apart and centromere 3, 7, 12, and 18 probes.ResultsCNS MZBCLs preferentially affect middle-aged women (female-to-male ratio, 4:1), with 93% presenting as dural-based masses mimicking meningioma. Ten patients with 1 to 7.6 years of follow-up after diagnosis showed no evidence of disease after radiation and/or chemotherapy. Like MZBCLs outside of the CNS, they consisted of CD20+, CD3−small B lymphocytes with varying degrees of plasmacytic differentiation and predominantly κ light-chain restriction (78%). Lymphoid follicles with follicular colonization were seen in three patients and deposition of amyloid was noted in samples from two patients, one of which was tumefactive. Neither Bcl-6 protein nor Epstein-Barr virus–encoded RNA was expressed. Trisomy 3 was detected in six of 12 patients, with no rearrangements of MALT1 or IgH and no trisomies of 7, 12, or 18 detected.ConclusionOur data suggest that intracranial MZBCL is an indolent primary CNS lymphoma that typically presents as a meningioma-like dural-based mass. Trisomy 3, but not MALT1 or IgH translocation, is a common genetic abnormality that may contribute to the pathogenesis of this CNS lymphoma.
Pregnancy-Associated Plasma Protein-A Is Involved in Matrix Mineralization of Human Adult Mesenchymal Stem Cells and Angiogenesis in the Chick Chorioallontoic Membrane
Jadlowiec, Julie, Dongell, Diana, Smith, Jason D. , Conover, Cheryl A. , Campbell, Phil G.

Endocrinology | May 26, 2005 | Volume: 146 | Issue: 9 | Pages: 3765-3772

10.1210/en.2004-1351 | PMID 15919757 Get It

Human Immunodeficiency Virus Type 1 Vpr-Mediated G2 Arrest Requires Rad17 and Hus1 and Induces Nuclear BRCA1 and γ-H2AX Focus Formation
Zimmerman, Erik S., Andersen, Joshua L. , Ardon, Orly , DeHart, Jason L. , Blackett, Jana, Choudhary, Shailesh K. , Camerini, David , Nghiem, Paul , Planelles, Vicente , Chen, Junjie

Molecular and Cellular Biology | October 14, 2004 | Volume: 24 | Issue: 21 | Pages: 9286-9294

10.1128/mcb.24.21.9286-9294.2004 | PMID 15485898 Get It

CD4+ T Cell Depletion during all Stages of HIV Disease Occurs Predominantly in the Gastrointestinal Tract
Brenchley, Jason M. , Schacker, Timothy W. , Ruff, Laura E., Price, David A. , Taylor, Jodie H., Beilman, Gregory J. , Nguyen, Phuong L., Khoruts, Alexander , Larson, Matthew , Haase, Ashley T. , Douek, Daniel C.

The Journal of Experimental Medicine | September 13, 2004 | Volume: 200 | Issue: 6 | Pages: 749-759

10.1084/jem.20040874 | PMID 15365096 Get It

The mechanisms underlying CD4+ T cell depletion in human immunodeficiency virus (HIV) infection are not well understood. Comparative studies of lymphoid tissues, where the vast majority of T cells reside, and peripheral blood can potentially illuminate the pathogenesis of HIV-associated disease. Here, we studied the effect of HIV infection on the activation and depletion of defined subsets of CD4+ and CD8+ T cells in the blood, gastrointestinal (GI) tract, and lymph node (LN). We also measured HIV-specific T cell frequencies in LNs and blood, and LN collagen deposition to define architectural changes associated with chronic inflammation. The major findings to emerge are the following: the GI tract has the most substantial CD4+ T cell depletion at all stages of HIV disease; this depletion occurs preferentially within CCR5+ CD4+ T cells; HIV-associated immune activation results in abnormal accumulation of effector-type T cells within LNs; HIV-specific T cells in LNs do not account for all effector T cells; and T cell activation in LNs is associated with abnormal collagen deposition. Taken together, these findings define the nature and extent of CD4+ T cell depletion in lymphoid tissue and point to mechanisms of profound depletion of specific T cell subsets related to elimination of CCR5+ CD4+ T cell targets and disruption of T cell homeostasis that accompanies chronic immune activation.
Substitution of 3′-Phosphate Cap with a Carbon-Based Blocker Reduces the Possibility of Fluorescence Resonance Energy Transfer Probe Failure in Real-Time PCR Assays
Cradic, Kendall W, Wells, Jason E. , Kruckeberg, Kent E., Grebe, Stefan K., Allen, Lindsay H. , Singh, Ravinder

Clinical Chemistry | May 25, 2004 | Volume: 50 | Issue: 6 | Pages: 1080-1082

10.1373/clinchem.2004.033183 | PMID 15161729 Get It

Determination of the relative energies of activation for the dissociation of aromatic versus aliphatic phosphopeptides by ESI-FTICR-MS and IRMPD
Flora, Jason W., Muddiman, David C.

Journal of the American Society for Mass Spectrometry | December 23, 2003 | Volume: 15 | Issue: 1 | Pages: 121-127

10.1016/j.jasms.2003.10.004 | PMID 14698562 Get It