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195 citation(s) found for "Qi, Andy".

Abstract 914: Xenobiotic metabolizing SNPs and ovarian cancer risk
White, Kristin L., Sellers, Thomas A. , Phelan, Catherine, Cunningham, Julie M. , Schildkraut, Joellen M. , Berchuck, Andy, Goode, Ellen L. , Vierkant, Robert A. , Fridley, Brooke L. , Olson, Janet E. , Beesley, Jonathan , Chenevix‐Trench, Georgia

Cancer Research | February 25, 2011 | Volume: 70 | Issue: 8_Supplement | Pages: 914-914

10.1158/1538-7445.am10-914 Get It

Abstract As the leading cause of mortality among gynecologic cancers, it is critical to increase understanding of ovarian cancer pathogenesis, which remains largely unknown. Several xenobiotic metabolizing enzymes are responsible for processing and inactivating carcinogens that could initiate ovarian carcinogenesis. Here, we hypothesize that single-nucleotide polymorphisms (SNPs) in genes encoding xenobiotic metabolizing enzymes may be associated with differential risk of ovarian cancer. Cases with epithelial ovarian cancer (N=930) and controls (N=1,037), frequency-matched on age and geographic residence, were enrolled at Mayo Clinic and Duke University, and genotyped at 163 tagSNPs in EPHX1, SULT1E1, ADH5, ADH4, ADH6, ADH1A, ADH1B, ADH1C, NQO2, NAT1, NAT2, GSTP1, CYP19A1, CYP1A1, CYP1A2, and NQO1 using an Illumina GoldenGate™ BeadArray array. Logistic regression was used to estimate odds ratios (ORs) and adjust for population structure and other potential confounders, including oral contraceptive use, parity, and family history. SNP-specific statistical analyses identified several noteworthy results including an association with increased risk of ovarian cancer with a SNP (rs2917666) in NAD(P)H dehydrogenase, quinone 1 (NQO1) (per-allele OR 1.16, 95% confidence interval (CI) 1.01-1.33, p=0.04). The SNP rs1051740 in epoxide hydrolase 1, microsomal (xenobiotic) (EPHX1) was suggestive of increased risk of invasive serous disease (TT v CT OR 0.85, 95% CI 0.66-1.09, TT v CC 1.29, 95% CI 0.89-1.88, p=0.09). In an effort to replicate these observations, a subset of 11 SNPs with a p-value < 0.10 were then genotyped in 727 invasive cancer cases and 1,065 controls from an Australian ovarian cancer study using a Sequenom iPlex assay. Results of combined analyses confirmed an association between EPHX1 rs1051740 and increased invasive serous ovarian cancer risk (TT v CT OR 0.99, 95% CI 0.77-1.29, TT v CC OR 1.61, 95% CI 1.23-2.11, p=0.001; recessive OR 1.61, 95% CI 1.25-2.09, p=0.001). This gene is involved in the activation and detoxification of tobacco-derived carcinogens, and smoking has been associated with the mucinous histologic subtype of ovarian cancer. Analyses by histological subtype and gene-environment interaction analyses considering genotype in conjunction with tobacco use and alcohol intake are underway. Due to the important role of EPHX1 in metabolizing pro-carcinogens and the observed association between rs1051740 and risk of invasive serous disease, an examination of this SNP in a larger ovarian cancer consortium is warranted. Citation Format: {Authors}. {Abstract title} [abstract]. In: Proceedings of the 101st Annual Meeting of the American Association for Cancer Research; 2010 Apr 17-21; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2010;70(8 Suppl):Abstract nr 914.
Detection and Quantification of Hepatitis C Virus (HCV) by MultiCode-RTx Real-Time PCR Targeting the HCV 3′ Untranslated Region
Mulligan, Elizabeth K., Germer, Jeffery J., Arens, Max Q., D'Amore, Krista L., Bisceglie, Adrian M. Di , Ledeboer, Nathan A., Moser, Michael J., Newman, Andrew, O'Guin, Andy K., Olivo, Paul D. , Podzorski, Diane, Vaughan, Kimberly A., Yao, Joseph D. , Elagin, Slava, Johnson, Scott C.

Journal of Clinical Microbiology | June 18, 2009 | Volume: 47 | Issue: 8 | Pages: 2635-2638

10.1128/jcm.02170-08 | PMID 19535519 Get It

ABSTRACT A prototype, real-time reverse-transcription PCR assay, based on MultiCode-RTx technology, quantifying hepatitis C virus (HCV) RNA by targeting the HCV 3′ untranslated region demonstrated linearity over 7 logs, with a good correlation between the quantitative results of this assay and the results of two commercially available comparator assays for 466 clinical specimens comprising all six HCV genotypes.
Managing Challenging Patient Behaviors
Twedell, Diane, McKay, Ann K., O'Neil, Marybeth, McMonigle, Andy, Twedell, Diane

The Journal of Continuing Education in Nursing | March 11, 2009 | Volume: 39 | Issue: 9 | Pages: 390-391

10.3928/00220124-20080901-04 | PMID 18792602 Get It

This column discusses how to manage challenging patient behaviors. J Contin Educ Nurs 2008;39(9):390–391.
p27-p16 Fusion Gene Inhibits Angioplasty-Induced Neointimal Hyperplasia and Coronary Artery Occlusion
Tsui, Lisa, Camrud, Allan R., Mondesire, Jean, Carlson, Paula, Zayek, Nathalie, Camrud, Ladonna J., Donahue, Brian A., Lin, Andy, Frey, David , Rivkin, Marianne, Subramanian, Ajit, Falotico, Robert, Gyuris, Jenő, Schwartz, Robert S., McArthur, James G., Bauer, Scott R.

Circulation Research | September 28, 2007 | Volume: 89 | Issue: 4 | Pages: 323-328

10.1161/hh1601.094482 | PMID 11509448 Get It

Inhibition of proliferative neointima formed by vascular smooth muscle cells is a potential target in preventing angioplasty-induced restenosis. We have created a potent antiproliferative by fusing the active regions of the p27 and p16 cell cycle inhibitors. Intravascular delivery of a replication-deficient adenoviral vector (AV) encoding this p27-p16 fusion protein, named W9, inhibited balloon injury–induced neointimal hyperplasia in rabbit carotid arteries. In a therapeutically more relevant model, AV-W9 was delivered to balloon-injured porcine coronary arteries in vivo using an infusion catheter. Of the three coronary arteries, two were injured with a 15-mm balloon catheter and either were left untreated or were treated with 10 12 viral particles of either AV-W9 or a control null virus. AV-W9 treatment significantly inhibited neointimal hyperplasia in this porcine arterial balloon injury model compared with untreated or control virus–treated vessels. The average intimal area of the AV-W9–treated group 10 days after balloon injury and treatment was 0.42±0.36 mm 2 , whereas the AV-null group demonstrated an intimal area of 0.70±0.52 mm 2 . At day 10 the average intimal thickness of the AV-W9–treated vessels was 9.1 μm (n=5, ×20 magnification) compared with 21.2 μm (n=5, ×20 magnification) in control virus–treated vessels. This trend was also observed at 28 days after balloon injury and gene transfer during which AV-W9–treated vessels demonstrated an average intimal thickness of 4.7 μm (n=8, ×20 magnification) compared with 13.3 μm (n=3, ×20 magnification) in control virus–treated vessels and 7.3 μm (n=5, ×20 magnification) in the sham-treated vessels. The AV-W9 treatment was safe and well tolerated. These data suggest that AV-W9 gene therapy may be useful in preventing angioplasty–induced intimal hyperplasia in the coronary artery.
Interactions of the Nuclear Matrix-Associated Steroid Receptor Binding Factor with Its DNA Binding Element in the c-myc Gene Promoter
Sandhu, Nicole P. , Tomlinson, Andy J., Benson, Linda M., Subramaniam, Malayannan , Naylor, Stephen , Spelsberg, Thomas C., Barrett, Thomas J.

Biochemistry | July 26, 2002 | Volume: 39 | Issue: 4 | Pages: 753-762

10.1021/bi991809v | PMID 10651641 Get It

Structural Characterization of Contaminants Found in Commercial Preparations of Melatonin:  Similarities to Case-Related Compounds from l-Tryptophan Associated with Eosinophilia-Myalgia Syndrome
Williamson, Brian L., Tomlinson, Andy J., Mishra, Prasanna K. , Gleich, Gerald J. , Naylor, Stephen

Chemical Research in Toxicology | July 26, 2002 | Volume: 11 | Issue: 3 | Pages: 234-240

10.1021/tx970202h | PMID 9544622 Get It

Zinc Binding Properties of the DNA Binding Domain of the 1,25-Dihydroxyvitamin D3 Receptor
Craig, Theodore A., Veenstra, Timothy D. , Naylor, Stephen , Tomlinson, Andy J., Johnson, Kenneth L. , Juranić, Nenad, Kumar, Rajiv , Macura, Slobodan , Kumar, Rajiv

Biochemistry | July 26, 2002 | Volume: 36 | Issue: 34 | Pages: 10482-10491

10.1021/bi970561b | PMID 9265628 Get It

Determination of Calcium-Binding Sites in Rat Brain Calbindin D28K by Electrospray Ionization Mass Spectrometry
Veenstra, Timothy D. , Johnson, Kenneth L. , Tomlinson, Andy J., Naylor, Stephen , Kumar, Rajiv , Kumar, Rajiv

Biochemistry | July 26, 2002 | Volume: 36 | Issue: 12 | Pages: 3535-3542

10.1021/bi9628329 | PMID 9132004 Get It

Capillary Isoelectric Focusing of Physiologically Derived Proteins with On-Line Desalting of Isotonic Salt Concentrations
Clarke, Nigel J. , Tomlinson, Andy J., Schomburg, G., Naylor, Stephen

Analytical Chemistry | July 26, 2002 | Volume: 69 | Issue: 14 | Pages: 2786-2792

10.1021/ac961283+ | PMID 9230682 Get It

Low temperature aqueous electrospray ionization mass spectrometry of noncovalent complexes
Veenstra, Timothy D. , Tomlinson, Andy J., Benson, Linda M., Kumar, Rajiv , Naylor, Stephen , Kumar, Rajiv

Journal of the American Society for Mass Spectrometry | July 25, 2002 | Volume: 9 | Issue: 6 | Pages: 580-584

10.1016/s1044-0305(98)00019-1 | PMID 9879371 Get It