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Mehta, Shyamal H.

https://orcid.org/0000-0003-3608-4456

Mayo Clinic

Mayo Clinic

Citations 78

Self-Supervised Learning and Opportunistic Inference for Continuous Monitoring of Freezing of Gait in Parkinson’s Disease
Soumma, Shovito Barua , Peterson, Daniel, Mehta, Shyamal H. , Ghasemzadeh, Hassan , Peterson, Daniel S. , Peterson, Daniel

ACM Transactions on Computing for Healthcare | March 24, 2026 | Volume: 7 | Issue: 3 | Pages: 1-24

10.1145/3802589 Get It

Parkinson’s disease (PD) significantly affects patients’ quality of life through debilitating motor symptoms, such as Freezing of Gait (FoG). Continuous, in-home monitoring of FoG is essential for timely clinical intervention but remains challenging due to high power consumption, annotation cost, and the controlled environments required by current wearables. We introduce LIFT-PD (the source code is available at: https://github.com/shovito66/LIFT-PD ), a novel self-supervised learning (SSL) framework for real-time, patient-independent FoG detection that uniquely utilizes a single waist-worn accelerometer—an approach traditionally considered less optimal due to weaker gait signatures. LIFT-PD leverages SSL on unlabeled data collected from uncontrolled, real-world settings and employs a novel Differential Hopping Windowing Technique (DHWT) to address gait variability and dataset imbalance. Additionally, an opportunistic inference module selectively activates the deep learning model only during patient movement, significantly reducing power consumption and enabling continuous monitoring ( \(>\) 48 hours). Experimental results show that LIFT-PD achieves a 7.25% increase in precision and 4.4% improvement in accuracy compared to supervised and semi-supervised baseline models while requiring approximately 40% fewer labeled training samples. Evaluations across diverse patient characteristics-including severity, medication state, age, and gender-confirm the model’s robustness and clinical applicability, positioning LIFT-PD as a practical, energy-efficient, and scalable solution for continuous real-world FoG monitoring in PD.
Amygdala gene alterations in Parkinson's disease
Aslam, Sidra, Walker, Jessica E. , Intorcia, Anthony J., Adler, Charles, Shill, H. A., Mehta, SH, Driver‐Dunckley, E. D., Atri, A., Beach, Thomas G, Serrano, Geidy E, Zeighami, Yashar, Tremblay, Cécilia , Frosi, Gabriella , Choudhury, Parichita , Adler, Charles, Shill, Holly A. , Mehta, Shyamal H. , Nagy, Corina , Driver‐Dunckley, Erika , Beach, Thomas G. , Serrano, Geidy E. , Zeighami, Yashar

Alzheimer's & Dementia | December 24, 2025 | Volume: 21 | Issue: S1 | Pages: No page available

10.1002/alz70855_106020 Get It

Abstract Background The amygdala is closely connected to the olfactory bulb and involved in olfactory processing as well. It is a particularly susceptible region that accumulates a‐synuclein pathology in Parkinson's disease (PD). Our previous work revealed olfactory bulb gene alterations related to neuroinflammation, and neurotransmitter dysfunction to be associated with olfactory function. We aimed to extend this work and assess gene expression changes, affected pathways and co‐expression networks by transcriptomic profiling of the amygdala in subjects with and without clinicopathologically defined PD. Method Bulk RNA sequencing was performed on frozen human amygdala of 20 PD and 20 controls without dementia or any other neurodegenerative disorder, from the Arizona Study of Aging and Neurodegenerative Disorders. Result Differential expression analysis, corrected for age, sex and post‐mortem interval revealed 40 significantly differentially expressed genes (DEGs) in PD. Downregulated genes were mainly related to altered hemoglobin expression while upregulated genes included inflammatory markers and glutamine transporter. Significantly enriched pathways were involved in oxygen and carbon dioxide transport, cellular oxidant detoxification and regulation of glutamine secretion. Cell enrichment revealed these genes to be mainly expressed in neurons. Co‐expression network analysis using Weighted correlation network analysis (WGCNA ) subsequently identified four significant modules correlated with both PD and premortem olfactory dysfunction which were involved in pathways related to neuroinflammatory processes, mitochondrial, endoplasmic reticulum and lysosomal dysfunction. Conclusion These preliminary results suggest cellular alterations in the amygdala related to mitochondrial dysfunction, altered oxygen homeostasis, oxidative stress, inflammation as well as glutamatergic neurotransmitter dysfunction that may contribute to neurodegeneration in PD.
Detection and Severity Assessment of Parkinson’s Disease Through Analyzing Wearable Sensor Data Using Gramian Angular Fields and Deep Convolutional Neural Networks
Mostafavi, Sayyed Mostafa , Soumma, Shovito Barua , Peterson, Daniel S. , Mehta, Shyamal H. , Ghasemzadeh, Hassan , Peterson, Daniel , Mehta, Shyamal

Sensors | May 29, 2025 | Volume: 25 | Issue: 11 | Pages: 3421

10.3390/s25113421 Get It

Parkinson’s disease (PD) is the second-most common neurodegenerative disease. With more than 20,000 new diagnosed cases each year, PD affects millions of individuals worldwide and is most prevalent in the elderly population. The current clinical methods for the diagnosis and severity assessment of PD rely on the visual and physical examination of subjects and identifying key disease motor signs and symptoms such as bradykinesia, rigidity, tremor, and postural instability. In the present study, we developed a method for the diagnosis and severity assessment of PD using Gramian Angular Fields (GAFs) in combination with deep Convolutional Neural Networks (CNNs). Our model was applied to PD gait signals captured using pressure sensors embedded into insoles. Our results indicated an accuracy of 98.6%, a true positive rate (TPR) of 99.2%, and a true negative rate (TNR) of 98.5%, showcasing superior classification performance for PD diagnosis compared to the methods used in recent studies in the literature. The estimation of disease severity scores using gait signals showed a high accuracy for the Hoehn and Yahr score as well as the Timed Up and Go (TUG) test score (R2 > 0.8), while we achieved a lower prediction performance for the Unified Parkinson’s Disease Rating Scale (UPDRS) and its motor component (UPDRSM) scores (R2 < 0.2). These results were achieved using gait signals recorded in time windows as small as 10 s, which may pave the way for shorter, more accessible assessment tools for diagnosis and severity assessment of PD.
Associations Between Neuropsychiatric Symptom Burden, Change in Cognitive Status and Survival in Autopsy-confirmed Cohorts of Lewy Body Disease and Alzheimer’s Disease (P1-5.028)
Chiu, Shannon , Shill, Holly A. , Mehta, Shyamal H. , Driver‐Dunckley, Erika , Belden, Christine M. , Tremblay, Cécilia , Zhang, Nan , Adler, Charles H. , Shprecher, David , Serrano, Geidy E. , Beach, Thomas, Atri, Alireza , Choudhury, Parichita

Neurology | April 7, 2025 | Volume: 104 | Issue: 7_Supplement_1 | Pages: No page available

10.1212/wnl.0000000000209009 Get It

Associations between neuropsychiatric symptoms and pathology in clinicopathologically defined Alzheimer's disease, Alzheimer's disease with Lewy bodies, and dementia with Lewy bodies
Tremblay, Cécilia , Shakir, Neha , Zhang, Nan , Adler, Charles H. , Shill, Holly A. , Mehta, Shyamal H. , Driver‐Dunckley, Erika , Belden, Christine M. , Beach, Thomas G., Mehta, Shyamal , Serrano, Geidy E , Choudhury, Parichita , Belden, Christine , Adler, C H , Atri, Alireza , Beach, Thomas G. , Serrano, Geidy E. , Choudhury, Parichita

Journal of Alzheimer’s Disease | March 14, 2025 | Volume: 104 | Issue: 3 | Pages: 933-942

10.1177/13872877251320670 Get It

Background Neuropsychiatric symptoms (NPS) are frequent in Alzheimer's disease (AD) dementia, but a higher NPS burden is found in dementia with Lewy bodies (DLB). Lewy body (LB) pathology frequently co-occurs with AD pathology and may not meet neuropathological criteria for DLB (ADLB). NPS trajectories over disease course in these subgroups is not well understood. Objective We investigated changes in NPS severity over time, at two time points, comparing clinicopathologically defined cohorts of AD (without LB), ADLB, DLB, and controls. Methods Cases with two available Neuropsychiatric Inventory-Questionnaire (NPIQ), at the time of enrollment and within 2.5 years of death, were selected from the Arizona Study of Aging and Neurodegenerative Disorders. Differences and rate of change in NPIQ scores were compared between AD (n = 75), ADLB (n = 48) DLB (n = 65), and controls (n = 32) with covariates for age, sex, and cognition. Results First NPIQ scores were highest in ADLB when compared to AD (p = 0.04) and controls (p = 0.01) but not different from DLB. A significant increase in NPS severity was observed in DLB and AD (p < 0.001) over a mean follow up time of 4.9 ± 3.0 years, and the rate of change was significantly greater in DLB when compared to other groups. Final NPIQ scores were highest in DLB when compared to AD (p = 0.03) but not ADLB, and in DLB, ADLB, and AD than controls ( all p < 0.001). Conclusions Early NPS burden as well as NPS severity progression rate, independently of cognitive status, might be useful clinical metrics and may help predict underlying pathological diagnoses.
Distribution of cognitive domains and neuropathology of cases with mild cognitive impairment
Adler, Charles, Mehta, Shyamal H. , Shill, Holly A. , Driver‐Dunckley, Erika, Belden, Christine M. , Beach, Thomas G., Ho, Andrew, Choudhury, Parichita , Shprecher, David , Driver‐Dunckley, Erika , Serrano, Geidy E. , Atri, Alireza , Tremblay, Cécilia

Alzheimer's & Dementia | January 3, 2025 | Volume: 20 | Issue: S3 | Pages: No page available

10.1002/alz.092655 Get It

AbstractBackgroundMild Cognitive Impairment (MCI) is a pre‐dementia state where impaired cognitive domains (memory, executive, visuospatial processing, language) may predict underlying pathology, e.g. Alzheimer’s disease(AD), Lewy body (LB), and other. Delineating neuropathological heterogeneity in MCI and their associations with neuropsychological profiles are important in identifying individuals at risk of further deterioration. We aimed to characterize the neuropathological heterogeneity in cases with a diagnosis of MCI.MethodCases with a final consensus cognitive diagnosis of MCI (n = 128) prior to death were selected from the Arizona Study of Aging and Neurodegenerative disorders (AZSAND). Groups were divided into amnestic (aMCI) and non‐amnestic MCI (naMCI), single and multi‐domain impairment, and specific domain impairment (executive, language, visuospatial) was explored. Presence and severity of neuropathology including AD, LB, cerebral white matter rarefaction (CWMR), cerebral amyloid angiopathy (CAA), cerebral infarcts and microinfarcts (cortical and subcortical), TAR DNA‐binding protein 43 (TDP‐43), and apolipoprotein E (ApoE) status were compared between MCI subtypes.ResultThe number of cases meeting neuropathological criteria for AD was not different between aMCI (36.4%) and naMCI (22.6%) while co‐existent PD was less frequent in aMCI (19.5% vs 38.7%). When compared to naMCI (n = 31), the aMCI (n = 85) group had an older age of death (p = 0.001), less educational years (p = 0.04), a higher number of subcortical infarcts (p = 0.012), a higher regional density of neurofibrillary tangles (p = 0.027) and a lower density of LB (p = 0.015) in the temporal lobe, and CWMR in tended to be more severe in the frontal lobe (p = 0.052). Those with single domain aMCI had less CWMR (p = 0.001) compared to the multidomain. Within the naMCI group, those with single domain MCI had higher proportions of CAA (p = 0.042), and lower LB density (p = 0.019) compared to multidomain. CWMR was more severe (p = 0.026) inConclusionA high heterogeneity was observed between MCI subtypes. While AD pathology was similar between groups, regional anatomical differences were observed. Vascular pathology including subcortical infarcts, CWMR and CAA appear to be commonly associated with both aMCI and naMCI respectively while CWMR was associated with executive dysfunctions. CWMR, CAA and LBs appear to be more frequent in multidomain aMCI and naMCI respectively.
Development of a composite score to predict Lewy body pathology burden
Zhang, Nan , Belden, Christine M. , Adler, Charles, Shill, Holly A. , Mehta, Shyamal H. , Driver‐Dunckley, Erika, Beach, Thomas G. , Reiman, Eric M., Choudhury, Parichita , Chen, Kewei , Tremblay, Cécilia , Ho, Andrew, Driver‐Dunckley, Erika , Shprecher, David , Serrano, Geidy E. , Reiman, Eric M. , Atri, Alireza

Alzheimer's & Dementia | January 3, 2025 | Volume: 20 | Issue: S3 | Pages: No page available

10.1002/alz.092056 Get It

AbstractBackgroundLewy body (LB) diseases can present with overlapping prodromal, cognitive, motor, autonomic or neuropsychiatric symptoms. Intuitively, greater symptom severity should correlate with greater pathological burden, but this has not been consistently shown. LB pathology does not translate to clinical expression in Incidental LB disease. While several composite scores/toolkits utilize overlapping schemes for diagnosis, a composite data‐derived score to predict LB pathologic burden is lacking. We aimed to utilize an autopsy‐confirmed cohort, and validated, brief, and standardized clinical, functional, pathologic assessments, and machine learning (ML)/quantitative modeling techniques to identify clusters and importance rankings among assessments/measures to predict LB pathologic severity and density.MethodA total of 234 subjects with neuropathological finding of LB at autopsy in the Arizona Study of Aging and Neurodegenerative Disorders (AZSAND) who were classified as Cognitively Unimpaired or Mild Cognitive Impairment after their first study clinical evaluation were included. Of these, 145 subjects had complete scores for 32 of 46 measures (clinical, cognitive, behavioral and functional) that were utilized as predictors of LB pathology. Olfactory function was assessed using the University of Pennsylvania Smell Identification Test (UPSIT). LB severity was assessed by the Unified Staging System for Lewy Body Disorders (USSLB). Several ML algorithms and quantitative prediction models were explored and compared: artificial neural network (ANN), partial least square regression (PLSR), support vector regression (SVR), relevance vector regression (RVR) and ensemble forest regression (EFR) with leave‐one‐out (LOO) scheme. Game‐theory based Shapley methods assessed the impact, including rankings, consistency and magnitude, of model predictors.ResultRVR predicted aggregate LB density with large effect size (R2 = 0.691, p<0.00001). ANN predicted USSLB severity stage with large effect size (R2 = 0.74, p<2.5e‐43). All other ML algorithms/models provided substantial prediction. Across all models, UPSIT was the most influential predictor (>65%), followed by Controlled Oral Word Association Test (COWAT) and age.ConclusionThese preliminary and exploratory results support the utilization of ML techniques/models to assess LB pathologic burden with key measures collected in relatively small samples. UPSIT was consistently ranked highest impactful among clinical and functional measures/predictors. Integrated together in ML/data‐derived composites, UPSIT, COWAT and other clinical characteristics may be of antemortem utility to predict USSLB stages.
Weight Loss in Parkinson’s Disease: No Evidence for Role of Small Intestinal Bacterial Overgrowth
DiBaise, John K. , Driver‐Dunckley, Erika , Mehta, Shyamal H. , Hoffman‐Snyder, Charlene , Lin, Tanya, Driver-Dunckley, Erika, Hoffman-Snyder, Charlene, Crowell, Michael D. , Adler, Charles H.

Journal of Parkinson’s Disease | November 26, 2024 | Volume: 8 | Issue: 4 | Pages: 571-581

10.3233/jpd-181386 Get It

Background and Objective: Weight loss and small intestinal bacterial overgrowth (SIBO) are common in Parkinson’s disease (PD). We aimed to study the relationship between weight loss and SIBO in PD. Methods: This was a cross-sectional study with a prospective, interventional component. Consecutive patients seen in the PD clinic who agreed to participate underwent extensive history, movement exam, SIBO breath testing and answered questionnaires. A subset of those in the weight loss group were treated with rifaximin for 14 days and returned 3 months later for an assessment of their weight, GI symptoms, quality of life and SIBO status. All analyses were adjusted for age and disease duration. Results: Fifty-one patients participated in the study; 37 without weight loss and 14 with weight loss. Total energy intake including the distribution of macronutrient intake was similar between groups while physical activity was less in those with weight loss. PD severity scores did not differ between groups; however, PD-specific quality of life scores were significantly worse for the summary index and the subscales of emotional well-being, social support and communication. The prevalence of constipation, dyspepsia and abdominal pain/discomfort was higher in those with weight loss. The prevalence of SIBO was 14% in the weight loss group and was not different between groups. Eight PD patients with weight loss were treated with rifaximin; no significant change in GI symptoms, quality of life or weight was seen 3 months later. Conclusion: Although a number of differences were identified in quality of life and gastrointestinal symptoms between groups with and without weight loss, SIBO was not associated with weight loss in patients with PD. Given the exploratory nature and small number of patients with weight loss, however, further study is suggested.
Predicting Post‐Mortem α‐Synuclein Pathology by the Combined Presence of Probable REM sleep behavior disorder and Hyposmia
Tremblay, Cécilia , Adler, Charles H. , Shill, Holly A. , Driver‐Dunckley, Erika, Mehta, Shyamal H. , Choudhury, Parichita , Belden, Christine M. , Lee‐Iannotti, Joyce , Beach, Thomas G. , Mehta, Shyamal, Beach, Thomas G , Adler, C H , Choudhury, Parichita , Driver‐Dunckley, Erika , Shprecher, David , Atri, Alireza , Serrano, Geidy E.

Movement Disorders Clinical Practice | November 5, 2024 | Volume: 12 | Issue: 2 | Pages: 157-165

10.1002/mdc3.14244 Get It

AbstractBackgroundIdiopathic rapid eye movement sleep behavior disorder (RBD) is a strong known predictor of a final clinicopathological diagnosis of a Lewy type α‐synucleinopathy (LTS). Olfactory dysfunction is an early symptom of synucleinopathies and has been repeatedly associated with the presence of post‐mortem LTS.ObjectiveTo assess the combined value of a clinician diagnosis of probable RBD (PRBD) and hyposmia in predicting the post‐mortem presence of LTS in a broader, less‐selected, volunteer elderly population.MethodsWe studied 652 autopsied subjects from the Arizona Study of Aging and Neurodegenerative Disorders, which were evaluated for PRBD, had completed annual movement and cognitive assessments, and had at least one the University of Pennsylvania Smell Identification Test (UPSIT) olfactory test.ResultsHistological evidence of LTS was significantly more frequent in those who had PRBD (112/152: 73.7%) than those without (177/494: 35.8%) (P < 0.001). LTS was more frequent in cases with PRBD and a low UPSIT score (90.8%) compared to cases with PRBD only (73.7%) (P < 0.001) or cases with a low UPSIT score only (69.4%) (P < 0.001). Sensitivity of PRBD diagnosis for predicting LTS was 38.8% and specificity 88.8%, whereas sensitivity of a low UPSIT score was 74.4% and specificity 73.4% (Youden's index = 0.276 for PRBD, 0.478 for UPSIT). When combining both measures, sensitivity was 34.3% and specificity increased to 97.2%.ConclusionPRBD, diagnosed without sleep study confirmation, combined with a reduced olfactory performance is highly specific for predicting post‐mortem presence of LTS. The combination of both measures may provide a cost‐effective means of predicting LTS in a broader community.
Conjugal Synucleinopathies: A Clinicopathologic Study
Adler, Charles H. , Halverson, Matthew , Shill, Holly A. , Driver‐Dunckley, Erika, Mehta, Shyamal H. , Caviness, John N., Belden, Christine M. , Long, Kathy E., Beach, Thomas G. , Driver-Dunckley, Erika, Beach, Thomas G , Adler, C H , Zhang, Nan , Driver‐Dunckley, Erika , Atri, Alireza , Serrano, Geidy E. , Shprecher, David , Sabbagh, Marwan Noel

Movement Disorders | April 10, 2024 | Volume: 39 | Issue: 7 | Pages: 1212-1217

10.1002/mds.29783 Get It

AbstractBackgroundWhile preclinical studies have shown that alpha‐synuclein can spread through cell‐to‐cell transmission whether it can be transmitted between humans is unknown.ObjectivesThe aim was to assess the presence of a synucleinopathy in autopsied conjugal couples.MethodsNeuropathological findings in conjugal couples were categorized as Parkinson's disease (PD), dementia with Lewy bodies (DLB), Alzheimer's disease with Lewy bodies (ADLB), incidental Lewy body disease (ILBD), or no Lewy bodies.ResultsNinety conjugal couples were included; the mean age of death was 88.3 years; 32 couples had no Lewy bodies; 42 couples had 1 spouse with a synucleinopathy: 10 PD, 3 DLB, 13 ADLB, and 16 ILBD; 16 couples had both spouses with a synucleinopathy: in 4 couples both spouses had PD, 1 couple had PD and DLB, 4 couples had PD and ADLB, 2 couples had PD and ILBD, 1 couple had DLB and ADLB, in 3 couples both had ADLB, and 1 couple had ADLB and ILBD. No couples had both spouses with ILBD.ConclusionsThis large series of 90 autopsied conjugal couples found 16 conjugal couples with synucleinopathies, suggesting transmission of synucleinopathy between spouses is unlikely. © 2024 International Parkinson and Movement Disorder Society.