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Varghese, Cyril

https://orcid.org/0009-0004-8415-8258

Mayo Clinic

Mayo Clinic

Citations 10

360 Using machine learning to analyze voice and detect aspiration
Varghese, Cyril , Charney, Sara , Abdalla, Abdelmohaymin , Holyfield, Stacy , Brown, Adam J. , Stearns, Hunter, Ortega, Victor E. , Zhang, Jianwei , Brown, Adam, Higgins, Michelle, Liss, Julie , Zhang, Nan , Lott, David G. , Berisha, Visar

Journal of Clinical and Translational Science | March 25, 2025 | Volume: 9 | Issue: s1 | Pages: 111-111

10.1017/cts.2024.986 Get It

Objectives/Goals: Aspiration causes or aggravates lung diseases. While bedside swallow evaluations are not sensitive/specific, gold standard tests for aspiration are invasive, uncomfortable, expose patients to radiation, and are resource intensive. We propose the development and validation of an AI model that analyzes voice to noninvasively predict aspiration. Methods/Study Population: Retrospectively recorded [i] phonations from 163 unique ENT patients were analyzed for acoustic features including jitter, shimmer, harmonic to noise ratio (HNR), etc. Patients were classified into three groups: aspirators (Penetration-Aspiration Scale, PAS 6–8), probable (PAS 3–5), and non-aspirators (PAS 1–2) based on video fluoroscopic swallow (VFSS) findings. Multivariate analysis evaluated patient demographics, history of head and neck surgery, radiation, neurological illness, obstructive sleep apnea, esophageal disease, body mass index, and vocal cord dysfunction. Supervised machine learning using five folds cross-validated neural additive network modelling (NAM) was performed on the phonations of aspirator versus non-aspirators. The model was then validated using an independent, external database. Results/Anticipated Results: Aspirators were found to have quantifiably worse quality of sound with higher jitter and shimmer but lower harmonics noise ratio. NAM modeling classified aspirators and non-aspirators as distinct groups (aspirator NAM risk score 0.528+0.2478 (mean + std) vs. non-aspirator (control) risk score of 0.252+0.241 (mean + std); p Discussion/Significance of Impact: We report the use of voice as a novel, noninvasive biomarker to detect aspiration risk using machine learning techniques. This tool has the potential to be used for the safe and early detection of aspiration in a variety of clinical settings including intensive care units, wards, outpatient clinics, and remote monitoring.
A Retrospective Evaluation of the Treatment Effects of Rituximab in Patients with Progressive and Symptomatic Fibrosing Mediastinitis
Varghese, Cyril , Johnson, Geoffery B., Eiken, Patrick W. , Edell, Eric S. , Larson, Nicholas B. , Peikert, Tobias, Larson, Nicholas B , Johnson, Geoffrey B. , Specks, Ulrich

Annals of the American Thoracic Society | August 6, 2024 | Volume: 21 | Issue: 11 | Pages: 1533-1541

10.1513/annalsats.202405-533oc Get It

Abstract Rationale Fibrosing mediastinitis (FM) is an uncommon fibroinflammatory condition without established or effective medical therapies. Infiltrating B lymphocytes are commonly present, and progressive fibrosis compromises mediastinal structures, including blood vessels and airways, resulting in significant morbidity and mortality. Objective To evaluate the benefits and side effects of rituximab in patients with progressive and symptomatic FM. Methods We treated 22 patients (median age, 35 yr; range, 15–68 yr; 45% female) with metabolically active, progressive FM with rituximab on an off-label basis. Additionally, patients were administered pneumocystis and antifungal prophylaxis when immunosuppressed with rituximab. Modeling of longitudinal treatment response based on changes in relative lesion volume from baseline was performed retrospectively using functional data analysis, and time-to-event modeling was performed to estimate treatment response rates based on a >30% reduction in pretreatment volume. The primary endpoints were lack of disease progression and change in mediastinal lesion volume on computed tomography (evaluated retrospectively). Results No patient experienced disease progression after rituximab therapy. Median clinical follow-up was 42 months (range, 7–94 mo) and imaging follow-up 21 months (range, 7–62 mo). A total of 82% of patients had confirmed histoplasmosis-associated FM. After rituximab treatment, a 49.6% (95% confidence interval, 17.5–64.4%) mean estimated decrease in pretreatment lesion volume was observed at 24 months. The estimated objective treatment response rate was 47.9% (95% confidence interval, 26.7–70.3%). Conclusions This observational study suggests that rituximab is a well tolerated and potentially effective therapy in a cohort of patients with symptomatic and progressive FM.
Radiographical bony lesions after discontinuation of immunosuppressant therapy: bone involvement in sarcoidosis
Pullins, Christopher, Varghese, Cyril , Koneru, S, Bracamonte, Jesse D., Pullins, Christopher

BMJ Case Reports | April 26, 2024 | Volume: 17 | Issue: 4 | Pages: e255611

10.1136/bcr-2023-255611 Get It

We describe a patient who had failed renal transplant after 13 years, eventually requiring a graft nephrectomy and discontinuation of immunosuppressive therapy, including antithymocyte globulin, tacrolimus and mycophenolate while on steroid avoidance protocol. Within a few months of complete discontinuation of the immunosuppressive medications, she developed lower back pain associated with numbness in her right anterolateral thigh. The radiological imaging demonstrated multiple bony lesions throughout her axial and appendicular skeleton with normal pulmonary findings. A computerised tomography-guided bone biopsy from the left iliac crest revealed fragments of bone with granulomatous inflammation, thus making the diagnosis of extrapulmonary sarcoidosis. Initiating treatment with prednisone resulted in near-complete resolution of symptoms. Long-term immunosuppressive therapy is administered to all renal transplant recipients to help prevent acute rejection and loss of renal allograft. This case highlights that immunosuppressants can conceal the presence of underlying conditions in transplant patients.
S3274 An Unusual Pulmonary Presentation of Inflammatory Bowel Disease
Pierce, Kyle M. , Silverman, Anna L. , Pisipati, Sailaja , Harris, Lucinda A. , Varghese, Cyril , Gurudu, Suryakanth, Ruff, Kevin

American Journal of Gastroenterology | October 18, 2023 | Volume: 118 | Issue: 10S | Pages: S2174-S2174

10.14309/01.ajg.0000962736.45617.cf Get It

Clinical Outcomes With and Without Plasma Exchange in the Treatment of Rapidly Progressive Interstitial Lung Disease Associated With Idiopathic Inflammatory Myopathy
EGGLESTON, REID , Baqir, Misbah , Varghese, Cyril , Pennington, Kelly M. , Hartman, Thomas E. , Ernste, Floranne C. , Eggleston, Reid H, Bekele, Delamo I.

JCR: Journal of Clinical Rheumatology | February 2, 2023 | Volume: 29 | Issue: 3 | Pages: 151-158

10.1097/rhu.0000000000001923 Get It

Abstract Background/Objective A subset of patients with idiopathic inflammatory myopathy (IIM) develops highly fatal, rapidly progressive interstitial lung disease (RP-ILD). Treatment strategies consist of glucocorticoid and adjunctive immunosuppressive therapies. Plasma exchange (PE) is an alternative therapy, but its benefit is unclear. In this study, we aimed to determine whether PE benefited outcomes for patients with RP-ILD. Methods In this medical records review study, we compared baseline characteristics and clinical outcomes for 2 groups of patients with IIM-related RP-ILD: those who received and did not receive PE. Results Our cohort consisted of 15 patients, 9 of whom received PE. Baseline demographic characteristics and severity of lung, skin, and musculoskeletal disease between the 2 groups of patients were not significantly different. Five patients required mechanical ventilation (2, PE; 3, no PE). Plasma exchange was generally a third-line adjunctive treatment option. The PE group had a longer median (interquartile range) hospitalization (27.0 [23.0–36.0] days) than the non-PE group (12.0 [8.0–14.0] days) (p = 0.02). There was a potential benefit in 30-day mortality improvement in those receiving PE (0% vs 33%, p = 0.14), with a statistically significant improvement in 2 important composite end points including 30-day mortality or need for lung transplant (0% vs 50%, p = 0.04) and 1-year mortality or need for lung transplant or hospital readmission for RP-ILD in those receiving PE (22% vs 83%, p = 0.04). Conclusions Plasma exchange may be an underutilized, safe salvage therapy for patients with IIM-related RP-ILD when other immunosuppressive therapies fail.
Lung Adenocarcinoma Invasiveness Varies Regionally and Can Be Predicted by Score Indicative of Lung Cancer Aggression (SILA)
Varghese, Cyril , Rajagopalan, S., Karwoski, Ronald A., Maldonado, Fabien , Peikert, Tobias, Rajagopalan, S., Bartholmai, Brian J. , Boland, Jennifer M.

A110. NOVEL IMAGING FOR LUNG CANCER: A PICTURE IS WORTH A THOUSAND WORDS | August 26, 2019 | Volume: No volume available | Issue: No issue available | Pages: A2612-A2612

10.1164/ajrccm-conference.2019.199.1_meetingabstracts.a2612 Get It

1718: CLOZAPINE CAMOUFLAGE
Varghese, Cyril , Haselton, Kyle, Baqir, Misbah , Sims, Jason

Critical Care Medicine | December 18, 2018 | Volume: 47 | Issue: 1 | Pages: 833-833

10.1097/01.ccm.0000552457.61258.13 Get It

The enteric microbiome in hepatobiliary health and disease
Varghese, Cyril , O’Hara, Steven P. , Tabibian, James H. , LaRusso, Nicholas F.

Liver International | November 12, 2015 | Volume: 36 | Issue: 4 | Pages: 480-487

10.1111/liv.13009 Get It

Abstract Increasing evidence points to the contribution of the intestinal microbiome as a potentially key determinant in the initiation and/or progression of hepatobiliary disease. While current understanding of this dynamic is incomplete, exciting insights are continually being made and more are expected given the developments in molecular and high‐throughput omics techniques. In this brief review, we provide a practical and updated synopsis of the interaction of the intestinal microbiome with the liver and its downstream impact on the initiation, progression and complications of hepatobiliary disease.
Microbiome‐immune interactions and liver disease
Varghese, Cyril , O’Hara, Steven P. , Tabibian, James H. , LaRusso, Nicholas F.

Clinical Liver Disease | May 7, 2015 | Volume: 5 | Issue: 4 | Pages: 83-85

10.1002/cld.453 Get It

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Mycoplasma pneumonia-associated mucositis
Varghese, Cyril , Sharain, Korosh , Skalski, Joseph H. , Ramar, Kannan

BMJ Case Reports | March 13, 2014 | Volume: 2014 | Issue: No issue available | Pages: bcr2014203795

10.1136/bcr-2014-203795 Get It

We present a case of a young man with severe mucositis following an upper respiratory tract infection limited to the ophthalmic and oral mucosa while sparing the rest of the skin, genitalia and perianal regions. Investigations revealed that the mucositis was a rare extrapulmonary manifestation of Mycoplasma pneumoniae infection. He had progressive vision-threatening symptoms despite antibiotics and best supportive care and thus was treated with intravenous corticosteroids, immunoglobulins, temporary ocular amniotic membrane grafts and tarsorrhaphy. The patient made an almost complete recovery over 6 weeks.