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Philips, Rachael L.

https://orcid.org/0000-0001-5440-4594

Mayo Clinic

National Institutes of Health

Citations 8

Metabolic Control of T cell responses by HDAC3
Wilfahrt, Drew Nicholas, Kizerwetter, Monika , Lama, Jyoti , Rajcula, Matthew, Kennedy, Madeleine, Philips, Rachael L. , Shapiro, Virginia Smith

The Journal of Immunology | February 7, 2023 | Volume: 206 | Issue: 1_Supplement | Pages: 24.15-24.15

10.4049/jimmunol.206.supp.24.15 Get It

Abstract After activation, CD4+ T cells undergo metabolic modifications in order to orchestrate successful immune responses. In particular, naïve T cells shift to a more glycolysis-heavy metabolic program that produces the necessary metabolites for growth, division, and exertion of effector function. Histone Deacetylase 3 (HDAC3) has been shown to epigenetically regulate many T cell fate decisions and is also capable of post-translationally modifying non-histone proteins. Deletion of HDAC3 in mature CD4+ T cells using a distal Lck-Cre HDAC3 cKO mouse revealed a reduction in differentiated T-helper cell populations in vivo. In contrast, in vitro differentiation of HDAC3-deficient CD4+ T cells occurred normally, however, the numbers of T cells present within each culture was greatly diminished. CD3/CD28-stimulated HDAC3-deficient cells exhibited poor proliferation with decreased blastogenesis, decreased CD25 expression, and decreased IL-2 production. Signaling downstream of TCR is disrupted in the HDAC3-deficient T cells. HDAC3-deficient CD4+ T cells have an overabundance of Foxo1 protein, and diminished signaling downstream of mTOR, including reduced phosphorylation of Ribosomal Protein S6, and decreased expression of Egr2. Key transporters involved in cholesterol efflux, ABCA1 and ABCG1, were upregulated in HDAC3-deficient CD4+ T cells. Strikingly, the proliferation and blasting defects of HDAC3-deficient CD4+ T cells are restored with the addition of exogenous cholesterol, but the signaling defects remain. Thus, the failure of HDAC3-deficient CD4+ T cells to proliferate is due to alterations in cholesterol homeostasis.
Author response: Histone deacetylase 3 represses cholesterol efflux during CD4+ T-cell activation
Lama, Jyoti , Kizerwetter, Monika , Shapiro, Michael J. , McCue, Shaylene , Kennedy, Madeleine M, Rajcula, Matthew, Wilfahrt, Drew N. , Philips, Rachael L. , Shapiro, Michael Jeremy, Kennedy, Madeleine, Zeng, Hu , Shapiro, Virginia Smith

No container title available | December 2, 2021 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.7554/elife.70978.sa2 Get It

Histone deacetylase 3 represses cholesterol efflux during CD4+ T-cell activation
Wilfahrt, Drew, Philips, Rachael L, Lama, Jyoti, Kizerwetter, Monika , Shapiro, Michael Jeremy, McCue, Shaylene A, Kennedy, Madeleine M, Rajcula, Matthew J, Zeng, Hu, Philips, Rachael L. , Wilfahrt, Drew N. , Lama, Jyoti , Shapiro, Virginia S , Lama, Jyoti, Kizerwetter, Monika , Shapiro, Michael Jeremy, McCue, Shaylene A, Kennedy, Madeleine M, Rajcula, Matthew J, Zeng, Hu

eLife | November 16, 2021 | Volume: 10 | Issue: No issue available | Pages: No page available

10.7554/elife.70978 Get It

After antigenic activation, quiescent naive CD4 + T cells alter their metabolism to proliferate. This metabolic shift increases production of nucleotides, amino acids, fatty acids, and sterols. Here, we show that histone deacetylase 3 (HDAC3) is critical for activation of murine peripheral CD4 + T cells. HDAC3-deficient CD4 + T cells failed to proliferate and blast after in vitro TCR/CD28 stimulation. Upon T-cell activation, genes involved in cholesterol biosynthesis are upregulated while genes that promote cholesterol efflux are repressed. HDAC3-deficient CD4 + T cells had reduced levels of cellular cholesterol both before and after activation. HDAC3-deficient cells upregulate cholesterol synthesis appropriately after activation, but fail to repress cholesterol efflux; notably, they overexpress cholesterol efflux transporters ABCA1 and ABCG1. Repression of these genes is the primary function for HDAC3 in peripheral CD4 + T cells, as addition of exogenous cholesterol restored proliferative capacity. Collectively, these findings demonstrate HDAC3 is essential during CD4 + T-cell activation to repress cholesterol efflux.
Author response: HDAC3 restrains CD8-lineage genes to maintain a bi-potential state in CD4+CD8+ thymocytes for CD4-lineage commitment
Gaonkar, Krutika S. , Chung, Ji Young, Ördög, Tamás , Philips, Rachael L. , Lee, Jeong‐Heon , Chanana, Pritha , Arocha, Sinibaldo Romero , Schwab, Aaron , Shapiro, Virginia Smith

No container title available | January 18, 2019 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.7554/elife.43821.038 Get It

HDAC3 restrains CD8-lineage genes to maintain a bi-potential state in CD4+CD8+ thymocytes for CD4-lineage commitment
Philips, Rachael L. , Lee, Jeong‐Heon , Gaonkar, Krutika S. , Chanana, Pritha , Chung, Ji Young, Arocha, Sinibaldo Romero , Schwab, Aaron , Ördög, Tamás , Shapiro, Virginia Smith , Philips, Rachael Laura, Gaonkar, Krutika, Romero Arocha, Sinibaldo R, Shapiro, Virginia S , Lee, Jeong-Heon , Schwab, Aaron D

eLife | January 18, 2019 | Volume: 8 | Issue: No issue available | Pages: No page available

10.7554/elife.43821 Get It

CD4 and CD8 T cells are vital components of the immune system. We found that histone deacetylase 3 (HDAC3) is critical for the development of CD4 T cells, as HDAC3-deficient DP thymocytes generate only CD8SP thymocytes in mice. In the absence of HDAC3, MHC Class II-restricted OT-II thymocytes are redirected to the CD8 cytotoxic lineage, which occurs with accelerated kinetics. Analysis of histone acetylation and RNA-seq reveals that HDAC3-deficient DP thymocytes are biased towards the CD8 lineage prior to positive selection. Commitment to the CD4 or CD8 lineage is determined by whether persistent TCR signaling or cytokine signaling predominates, respectively. Despite elevated IL-21R/γc/STAT5 signaling in HDAC3-deficient DP thymocytes, blocking IL-21R does not restore CD4 lineage commitment. Instead, HDAC3 binds directly to CD8-lineage promoting genes. Thus, HDAC3 is required to restrain CD8-lineage genes in DP thymocytes for the generation of CD4 T cells.
Cutting Edge: HDAC3 Protects Double-Positive Thymocytes from P2X7 Receptor–Induced Cell Death
Philips, Rachael L. , McCue, Shaylene , Rajcula, Matthew, Shapiro, Virginia Smith , Shapiro, Virginia S

The Journal of Immunology | January 9, 2019 | Volume: 202 | Issue: 4 | Pages: 1033-1038

10.4049/jimmunol.1801438 Get It

Abstract Intricate life-versus-death decisions are programmed during T cell development, and the regulatory mechanisms that coordinate their activation and repression are still under investigation. In this study, HDAC3-deficient double-positive (DP) thymocytes exhibit a severe decrease in numbers. The thymic cortex is rich in ATP, which is released by macrophages that clear apoptotic DP thymocytes that fail to undergo positive selection. We demonstrate that HDAC3 is required to repress expression of the purinergic receptor P2X7 to prevent DP cell death. HDAC3-deficient DP thymocytes upregulate the P2X7 receptor, increasing sensitivity to ATP-induced cell death. P2rx7/HDAC3-double knockout mice show a partial rescue in DP cell number. HDAC3 directly binds to the P2rx7 enhancer, which is hyperacetylated in the absence of HDAC3. In addition, RORγt binds to the P2rx7 enhancer and promotes P2X7 receptor expression in the absence of HDAC3. Therefore, HDAC3 is a critical regulator of DP thymocyte survival and is required to suppress P2X7 receptor expression.
HDAC3 Is Required for the Downregulation of RORγt during Thymocyte Positive Selection
Philips, Rachael L. , Chen, Meibo W., McWilliams, Douglas C., Belmonte, Paul , Constans, Megan, Belmonte, Paul J, Constans, Megan M, Shapiro, Virginia Smith , Belmonte, Paul J

The Journal of Immunology | June 9, 2016 | Volume: 197 | Issue: 2 | Pages: 541-554

10.4049/jimmunol.1502529 Get It

Abstract To generate functional peripheral T cells, proper gene regulation during T cell development is critical. In this study, we found that histone deacetylase (HDAC) 3 is required for T cell development. T cell development in CD2-icre HDAC3 conditional knockout (cKO) mice (HDAC3-cKO) was blocked at positive selection, resulting in few CD4 and CD8 T cells, and it could not be rescued by a TCR transgene. These single-positive thymocytes failed to upregulate Bcl-2, leading to increased apoptosis. HDAC3-cKO mice failed to downregulate retinoic acid–related orphan receptor (ROR) γt during positive selection, similar to the block in positive selection in RORγt transgenic mice. In the absence of HDAC3, the RORC promoter was hyperacetylated. In the periphery, the few CD4 T cells present were skewed toward RORγt+ IL-17–producing Th17 cells, leading to inflammatory bowel disease. Positive selection of CD8 single-positive thymocytes was restored in RORγt-KO Bcl-xL transgenic HDAC3-cKO mice, demonstrating that HDAC3 is required at positive selection to downregulate RORγt.
Osteoblasts Protect AML Cells From SDF‐1‐Induced Apoptosis
Kremer, Kimberly N. , Dudakovic, Amel , McGee‐Lawrence, Meghan E. , Philips, Rachael L. , Hess, Allan D., Wijnen, André J. van , Karp, Judith E. , Hedin, Karen E. , Smith, B. Douglas , Kaufmann, Scott H. , Westendorf, Jennifer J. , van Wijnen, Andre J , McGee-Lawrence, Meghan E

Journal of Cellular Biochemistry | December 28, 2013 | Volume: 115 | Issue: 6 | Pages: 1128-1137

10.1002/jcb.24755 Get It

ABSTRACTThe bone marrow provides a protective environment for acute myeloid leukemia (AML) cells that often allows leukemic stem cells to survive standard chemotherapeutic regimens. Targeting these leukemic stem cells within the bone marrow is critical for preventing relapse. We recently demonstrated that SDF‐1, a chemokine abundant in the bone marrow, induces apoptosis in AML cell lines and in patient samples expressing high levels of its receptor, CXCR4. Here we show that a subset of osteoblast lineage cells within the bone marrow can protect AML cells from undergoing apoptosis in response to the SDF‐1 naturally present in that location. In co‐culture systems, osteoblasts at various stages of differentiation protected AML cell lines and patient isolates from SDF‐1‐induced apoptosis. The differentiation of the osteoblast cell lines, MC3T3 and W‐20‐17, mediated this protection via a cell contact‐independent mechanism. In contrast, bone marrow‐derived mesenchymal cells, the precursors of osteoblasts, induced apoptosis in AML cells via a CXCR4‐dependent mechanism and failed to protect AML cells from exogenously added SDF‐1. These results indicate that osteoblasts in the process of differentiation potently inhibit the SDF‐1‐driven apoptotic pathway of CXCR4‐expressing AML cells residing in the bone marrow. Drugs targeting this protective mechanism could potentially provide a new approach to treating AML by enhancing the SDF‐1‐induced apoptosis of AML cells residing within the bone marrow microenvironment. J. Cell. Biochem. 115: 1128–1137, 2014. © 2013 Wiley Periodicals, Inc.