Jin, Yong‐Su
Mayo Clinic
University of Illinois Urbana-Champaign
Citations 1
TaxiBGC: a Taxonomy-Guided Approach for Profiling Experimentally Characterized Microbial Biosynthetic Gene Clusters and Secondary Metabolite Production Potential in Metagenomes
Gupta, Vinod K. , Bakshi, Utpal , Chang, Daniel , Lee, Aileen R. , Chandrasekaran, Sriram , Sung, Jaeyun , Sung, Jaeyun , Davis, John M., Jin, Yong‐Su , Freeman, Michael F.
mSystems | November 15, 2022 | Volume: 7 | Issue: 6 | Pages: No page available
Currently available bioinformatics tools to identify BGCs from metagenomic sequencing data are limited in their predictive capability or ease of use to even computationally oriented researchers. We present an automated computational pipeline called TaxiBGC, which predicts experimentally characterized BGCs (and infers their known SMs) in shotgun metagenomes by first considering the microbial species source.