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Farnell, David

0000-0001-8589-4354

Mayo Clinic

University of British Columbia

Citations 2

The significance of histological activity measurements in immune checkpoint inhibitor colitis
Pai, Rish K. , Pai, Reetesh K., Pai, Reetesh K., Brown, Ian , Choi, Won‐Tak , Kumarasinghe, M. Priyanthi , Gunawardena, Dilini , Kim, Baek Hui, Friedman, Mark , Ghayouri, Masoumeh, Lauwers, Gregory Y. , Brown, Ian S , Pai, Reetesh K., Pai, Reetesh K., Schaeffer, David F. , Farnell, David

Alimentary Pharmacology & Therapeutics | September 3, 2023 | Volume: 53 | Issue: 1 | Pages: 150-159

10.1111/apt.16142 Get It

SummaryBackgroundColitis is a significant complication of immune checkpoint inhibitors (ICI). Currently, clinical and endoscopic severity are used to guide therapy.AimsTo investigate associations between clinical, endoscopic, and histological features with outcomesMethodsWe identified 149 patients from seven institutions with biopsy‐proven ICI colitis. Biopsies were evaluated for histological features including the Geboes score, and the Robarts histopathological index (RHI) was calculated. Clinical, endoscopic, and histological data were tested for associations with biological use and adverse colitis outcomes (biological‐refractory colitis, colectomy or death from colitis).ResultsThree mutually exclusive histological patterns were identified: acute colitis, chronic active colitis and microscopic colitis. Microscopic colitis was associated with older age (68.5 vs 61 years for acute colitis pattern, P = 0.02) and longer time to colitis (5.5 vs 3 months for the other patterns, P = 0.05). Biological use was associated with earlier time to colitis (2 vs 3 months, P = 0.04) and higher RHI (18 vs 12, P = 0.007). On multivariate analysis, RHI ≥14 was associated with biological use with an odds ratio of 4.5 (95% CI 1.4‐13.8; P = 0.01). Adverse colitis outcomes were associated with shorter time to colitis (2 vs 3 months, P = 0.008) and higher RHI (24 vs 14, P = 0.001). On multivariate analysis, RHI ≥24 was associated with adverse colitis outcomes with an odds ratio 9.5 (95% CI 2.1‐42.3 P = 0.003).ConclusionHistological activity as measured by RHI is the only factor independently associated with biological use and adverse colitis outcomes. Prospective studies are needed to validate these findings to determine if histological activity should be incorporated into therapeutic algorithms.
The proteome of clear cell ovarian carcinoma
Ji, Jennifer X. , Cochrane, Dawn R. , Negri, Gian Luca , Colborne, Shane, Hoang, Lynn , Tessier‐Cloutier, Basile , Huvila, Jutta , Thompson, Emily F. , Leung, Samuel , Chow, Christine , Ta, Monica , Köbel, Martin , Feil, Lucas, Anglesio, Michael S. , Goode, Ellen L. , Huntsman, David G. , Tessier-Cloutier, Basile , Huvila, Jutta , Thompson, Emily , Anglesio, Michael S , Huntsman, David G , Köbel, Martin , Miko, Sandra E. Spencer , Farnell, David , Chiu, Derek S , Bolton, Kelly L. , Morin, Gregg B.

The Journal of Pathology | August 29, 2022 | Volume: 258 | Issue: 4 | Pages: 325-338

10.1002/path.6006 Get It

AbstractClear cell ovarian carcinoma (CCOC) is the second most common subtype of epithelial ovarian carcinoma. Late‐stage CCOC is not responsive to gold‐standard chemotherapy and results in suboptimal outcomes for patients. In‐depth molecular insight is urgently needed to stratify the disease and drive therapeutic development. We conducted global proteomics for 192 cases of CCOC and compared these with other epithelial ovarian carcinoma subtypes. Our results showed distinct proteomic differences in CCOC compared with other epithelial ovarian cancer subtypes including alterations in lipid and purine metabolism pathways. Furthermore, we report potential clinically significant proteomic subgroups within CCOC, suggesting the biologic plausibility of stratified treatment for this cancer. Taken together, our results provide a comprehensive understanding of the CCOC proteomic landscape to facilitate future understanding and research of this disease. © 2022 The Pathological Society of Great Britain and Ireland.