Back to Authors

Datta, Keshava K.

0000-0002-4322-5491

Mayo Clinic

Institute of Bioinformatics

Citations 2

Intracranial Aneurysm Biomarker Candidates Identified by a Proteome-Wide Study
Sharma, Tanavi , Kumar, Munish , Dey, Gourav , Khan, Aafaque Ahmad , Mangalaparthi, Kiran K. , Saharan, Poonam, Chinnapparaj, Shobia, Aggarwal, Ashish , Singla, Navneet , Ghosh, Sujata , Dhandapani, Sivashanmugam , Salunke, Pravin , Chhabra, Rajesh, Singh, Dalbir, Takkar, Aastha , Prasad, Thottethodi Subrahmanya Keshava , Pandey, Akhilesh , Bhagat, Hemant , Pandey, Akhilesh , Prasad, Thottethodi Subrahmanya Keshav , Datta, Keshava K. , Rawat, Amit Kumar , Gupta, Sunil , Gowda, Harsha , Mukherjee, Kanchan Kumar

OMICS: A Journal of Integrative Biology | June 11, 2020 | Volume: 24 | Issue: 8 | Pages: 483-492

10.1089/omi.2020.0057 Get It

The scientific basis of intracranial aneurysm (IA) formation, its rupture and further development of cerebral vasospasm is incompletely understood. Aberrant protein expression may drive structural alterations of vasculature found in IA. Deciphering the molecular mechanisms underlying these events will lead to identification of early detection biomarkers and in turn, improved treatment outcomes. To unravel differential protein expression in three clinical subgroups of IA patients: (1) unruptured aneurysm, (2) ruptured aneurysm without vasospasm, (3) ruptured aneurysm who developed vasospasm, we performed untargeted quantitative proteomic analysis of aneurysm tissue and serum samples from three subgroups of IA patients and control subjects. Candidate molecules were then validated in a larger cohort of patients using enzyme-linked immunosorbent assay. A total of 937 and 294 proteins were identified from aneurysm tissue and serum samples, respectively. Several proteins that are known to maintain structural integrity of vasculature were found to be dysregulated in the context of aneurysm. ORM1 , a glycoprotein, was significantly upregulated in both tissue and serum samples of unruptured aneurysm patients. We employed a larger cohort of subjects ( n = 26) and validated ORM1 as a potential biomarker for screening of unruptured aneurysms. Samples from ruptured aneurysms with vasospasm showed significant upregulation of MMP9 , a protease, compared with ruptured aneurysms without vasospasm. We validated MMP9 as a potential biomarker for vasospasm in a larger cohort ( n = 52). This study reports the first global proteomic analysis of the entire clinical spectrum of IA. Furthermore, this study suggests ORM1 and MMP9 as potential biomarkers for unruptured aneurysm and cerebral vasospasm, respectively.
Proteomic Analysis of the Human Anterior Pituitary Gland
Yelamanchi, Soujanya D. , Tyagi, Ankur , Mohanty, Varshasnata , Korbonits, Márta , Chavan, Sandip , Advani, Jayshree , Madugundu, Anil K. , Dey, Gourav , Rajyalakshmi, M., Sahasrabuddhe, Nandini A., Chaturvedi, Abhishek , Kumar, Amit , Das, Apabrita Ayan , Ghosh, Dhiman , Jogdand, Gajendra M. , Haritha, Nair Hariprasad , Saini, Keshav , Panchal, Manoj, Sarvaiya, Mansi Ashwinsinh, Mohanraj, Soundappan S. , Sengupta, Nabonita, Saxena, Priti , Subramani, Pradeep Annamalai , Kumar, Pradeep , Akkali, Rakhil, Reshma, S.V., Santhosh, Ramachandran Sarojini , Kumar, Sudarshan , Ghosh, Susanta Kumar , Irlapati, Vamshi K., Srinivasan, Anand, Radotra, Bishan, Mathur, Premendu P. , Wong, G. William , Satishchandra, Parthasarathy, Chatterjee, Aditi , Bhansali, Anil , Pandey, Akhilesh , Shankar, Susarla Krishna, Mahadevan, Anita , Prasad, Thottethodi Subrahmanya Keshava , Pandey, Akhilesh , Pandey, Akhilesh , Prasad, Thottethodi Subrahmanya Keshav , Dutta, Pinaki R , Datta, Keshava K. , Rajyalakshmi, M., Rastogi, Sangita , Srinivasan, Anand, Gowda, Harsha

OMICS: A Journal of Integrative Biology | December 20, 2018 | Volume: 22 | Issue: 12 | Pages: 759-769

10.1089/omi.2018.0160 Get It

Abstract The pituitary function is regulated by a complex system involving the hypothalamus and biological networks within the pituitary. Although the hormones secreted from the pituitary have been well studied, comprehensive analyses of the pituitary proteome are limited. Pituitary proteomics is a field of postgenomic research that is crucial to understand human health and pituitary diseases. In this context, we report here a systematic proteomic profiling of human anterior pituitary gland (adenohypophysis) using high-resolution Fourier transform mass spectrometry. A total of 2164 proteins were identified in this study, of which 105 proteins were identified for the first time compared with high-throughput proteomic-based studies from human pituitary glands. In addition, we identified 480 proteins with secretory potential and 187 N-terminally acetylated proteins. These are the first region-specific data that could serve as a vital resource for further investigations on the physiological role of the human anterior pituitary glands and the proteins secreted by them. We anticipate that the identification of previously unknown proteins in the present study will accelerate biomedical research to decipher their role in functioning of the human anterior pituitary gland and associated human diseases.