A Comparison of Software Packages that Assess Linkage Using a Variance Components Approach
Genetic Epidemiology | July 28, 2017 | Volume: 21 | Issue: S1 | Pages: No page available
10.1002/gepi.2001.21.s1.s81
We report single‐point and multipoint results from three statistical genetics software packages using a variance components approach for quantitative traits. When possible, we have shown the effects of covariates. Results from GENEHUNTER, SOLAR, and ACT software packages are compared for the quantitative trait immunoglobulin E (IgE) using chromosome 5 asthma familial data from Oxfordshire (England), Perth (Australia), and Freiburg (Germany), and using the genome‐wide German data. Although few differences among variance components results for GENEHUNTER, SOLAR, and ACT were detected on a limited region of chromosome 5, these packages showed larger disagreement in the German data for chromosomes 1, 9, and 14. © 2001 Wiley‐Liss, Inc.