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Abu Saleh, Omar

0000-0003-4955-5544

Mayo Clinic

Division of Public Health, Infectious Diseases, and Occupational Medicine; Mayo Clinic, Rochester, Minnesota, USA.

Citations 44

A Candid Appraisal of Repeat Blood Cultures in Candidemia—Missed Detection or Incident Infection?
Maamari, Julian , McHugh, Jack , Abu Saleh, Omar , Sohani, Zahra N

Clinical Infectious Diseases | August 20, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1093/cid/ciag518 Get It

Retrospective Analysis of Chronic Q Fever Cases at a Tertiary Care Center from 2007 to 2023
Dumais, Mitchell , Howick, James F. , Garcia, Sofia Molina , Zein, Said El , Saleh, O. Abu, Dumais, Mitchell G , Howick V, James F , El Zein, Said , Abu Saleh, Omar , Molina Garcia, Sofia

Open Forum Infectious Diseases | August 20, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1093/ofid/ofag542 Get It

Abstract Background Chronic Q fever, caused by Coxiella burnetii, presents significant diagnostic and management challenges due to its variable presentation and high morbidity, especially among patients with underlying cardiac or vascular disease. In the United States, cases are rising, often without identifiable exposures, and diagnostic delays remain common. Methods We conducted a retrospective cohort study of chronic Q fever cases at the Mayo Clinic from 2007 to 2023. Patients with clinical evidence and a phase I IgG titer ≥1:1024 and/or positive PCR for C. burnetii were included. Data were abstracted from electronic health records, including demographics, exposures, clinical manifestations, diagnostics, treatments, and outcomes. Statistical analyses assessed factors influencing diagnostic delay and treatment response. Results We identified 33 patients with chronic Q fever (median age 56; 88% male). Median time to diagnosis was 99 days with 11.4 days between Infectious Diseases (ID) evaluation and diagnosis. Animal exposure was reported in 17 patients (52%), while eight (24%) had no identifiable exposure. Patients primarily presented with prosthetic valve endocarditis (n=14, 42%), or vascular graft infection (n=9, 27%). The majority were treated with doxycycline and hydroxychloroquine (n=25, 75%) and 14 patients (42%) required surgical intervention. Mortality attributable to chronic Q fever was 6% (n=2). Conclusions Chronic Q fever remains under-recognized, with substantial diagnostic delays prior to treatment. Cardiovascular infection predominates, and surgical intervention is often required despite prolonged antimicrobial therapy. Early specialist evaluation and standardized diagnostic pathways may improve outcomes.
Clinical characteristics and outcomes of invasive Listeria monocytogenes infection: a 45-year retrospective study at a U.S. Tertiary Center
Samreen, Ayesha , Dominguez, Maria Alejandra Mendoza, Vaillant, James J. , Saleh, Omar Abu , Abu Saleh, Omar , Samreen, Ayesha

Open Forum Infectious Diseases | August 2, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1093/ofid/ofag496 Get It

Abstract Background Invasive listeriosis remains a leading cause of foodborne infection–related mortality in the United States and is associated with substantial case fatality despite appropriate antimicrobial therapy. Owing to the relative rarity of invasive disease, contemporary data evaluating clinical characteristics, optimal antimicrobial strategies, and predictors of mortality remain limited. Methods We conducted a retrospective cohort study of adults with laboratory-confirmed invasive Listeria monocytogenes infection at Mayo Clinic Health System sites from 1980 to 2024. Clinical syndromes were categorized into four mutually exclusive categories, namely bloodstream infection, central nervous system infection, pregnancy-associated infection, and other focal infections. The primary outcome was 1-year all-cause mortality. Secondary outcomes included 90-day mortality and residual neurological deficits among patients with neurolisteriosis. Results Fifty patients were included (median age, 72 years; 56% immunocompromised). The most common clinical presentations were bacteremia (44%) and neurolisteriosis (36%), followed by endovascular infection (12%) and peritonitis (6%). Most patients received a beta-lactam–based regimen, 46% aminopenicillin monotherapy, and 30% received combination therapy with gentamicin. Thirty-day, 90-day, and 1-year mortality were 10%, 12%, and 20%, respectively. Immunocompromised status and intensive care unit admission were associated with an increased risk of 1-year mortality, whereas adjunctive gentamicin therapy was not associated with improved survival. Conclusion Invasive listeriosis is associated with substantial morbidity and mortality, particularly among immunocompromised hosts. Host factors and severity of illness at presentation appear to be key drivers of unfavorable outcomes. Larger multicenter studies are needed to define optimal management strategies.
Characteristics and Clinical Outcomes of Lyme Arthritis: A Retrospective Study
Abu-Zeinah, Khalid , Garcia, Sofia Molina , Fida, Madiha , Saleh, Omar Abu , Molina Garcia, Sofia , Abu Saleh, Omar , Fida, Madiha , Abu-Zeinah, Khalid

Open Forum Infectious Diseases | June 17, 2026 | Volume: 13 | Issue: 6 | Pages: No page available

10.1093/ofid/ofag368 Get It

Abstract Background Lyme arthritis is the most common late manifestation of disseminated Lyme disease in the United States. While most patients respond to antibiotic therapy, a subset develops postantibiotic Lyme arthritis (PALA), characterized by persistent noninfectious inflammatory arthritis. Data describing predictors of PALA and treatment patterns remain limited. Methods We conducted a retrospective observational cohort study of patients with polymerase chain reaction (PCR)−confirmed native joint Lyme arthritis treated at our institution from 2004 to 2025. Clinical, laboratory, imaging, treatment, and outcome data were abstracted from electronic health records. Continuous variables were compared using the Mann–Whitney U test, and categorical variables using Fisher's exact test. Results Seventy-seven patients with PCR-confirmed native joint Lyme arthritis were identified: 64 adults and 13 children. Children more frequently presented with fever and had significantly higher synovial fluid white blood cell counts compared with adults. Knee monoarthritis was the predominant presentation in both groups. Among adults, 41 (64%) achieved complete symptomatic resolution following antibiotic therapy, while 19 (29.7%) developed PALA. Adults who developed PALA had significantly lower synovial fluid white blood cell counts and more extensive joint involvement. The use of intravenous antibiotics and longer total antibiotic duration was more common among PALA patients without evidence of improved outcomes. Conclusions In this cohort of PCR-confirmed native joint Lyme arthritis, a substantial proportion of adults developed PALA. Failure to respond to initial antibiotic therapy and certain clinical features may identify patients at increased risk. These findings support judicious antibiotic use and early consideration of noninfectious mechanisms in persistent arthritis.
Early Experience With Beta-Lactam Therapeutic Drug Monitoring in an Outpatient Parenteral Antimicrobial Therapy (OPAT) Program
Barrett, Kemar O. , Rivera, Christina G. , Saleh, O. Abu, Pertzborn, Margaret , Ausman, Sara , Hannan, Kellie Arensman, Stevens, Ryan W. , Barreto, E, Hannan, Kellie N. Arensman , Abu Saleh, Omar , Ausman, Sara E , Arensman Hannan, Kellie , Stevens, Ryan W , Rivera, Christina G , Barrett, Kemar O , AbuSaleh, Omar, Rule, Andrew D. , Frazee, Erin N.

Open Forum Infectious Diseases | May 22, 2026 | Volume: 13 | Issue: 5 | Pages: No page available

10.1093/ofid/ofag299 Get It

Abstract We describe early experience with beta-lactam therapeutic drug monitoring (TDM) in a high-volume outpatient parenteral antimicrobial therapy program. In selected patients, TDM informed dose optimization and toxicity mitigation. Illustrative cases highlight feasibility and emerging lessons supporting beta-lactam TDM in outpatient care.
Show Me the “Mino:” In Vitro Efficacy of Minocycline on Clinical Gram-Negative Bacterial Isolates
Streck, Nicholas , Saleh, O. Abu, Crowley, Patrick D , Mira, Portia , Challener, Douglas W. , Abu Saleh, Omar , Crowley, Patrick D., Ranganath, Nischal , Rivera, Christina G. , AbuSaleh, Omar

Microbial Drug Resistance | March 31, 2026 | Volume: 32 | Issue: 4 | Pages: 128-134

10.1177/10766294261424485 Get It

Background: There are limited oral treatment options available for resistant Gram-negative bacterial (GNB) infections. Minocycline, a second-generation tetracycline antibiotic, offers good bioavailability and broad-spectrum coverage that may be an option for GNB infections. Methods: We conducted a retrospective review of minocycline susceptibility testing performed on GNB isolates at the Mayo Clinic reference lab between 2013 and 2022. Minocycline susceptibility was evaluated with a focus on difficult-to-treat organisms and relevant anatomic source. Organisms included resistant isolates of Escherichia coli and Klebsiella pneumoniae ; high-risk ampC-derepressors, including Citrobacter freundii, Enterobacter cloacae, and K. aerogenes; and clinically challenging non-Enterobacterales, Acinetobacter species, Achromobacter species, and Stenotrophomonas maltophilia . Results: Of 217,206 GNB isolates, 18,148 Enterobacterales (EB) and 8,190 non- Enterobacter isolates were tested for minocycline susceptibility. Of these, 80% of all EB and 92% of non-EB isolates were susceptible. Among E. coli isolates with ceftriaxone, ciprofloxacin, meropenem, or multidrug resistance, minocycline susceptibility was 78%, 76%, 70%, and 70.9%, respectively. Among the K. pneumoniae isolates with ceftriaxone, ciprofloxacin, meropenem, or multidrug resistance, minocycline susceptibility was 46%, 38%, 37%, and 39.3%, respectively. 85% of C. freundii , 81% of E. cloacae, and 85% of K. aerogenes isolates were susceptible to Minocycline. 83.5% of Achromobacter species isolates, 66% of Acinetobacter species isolates, and 99.1% of S. maltophilia isolates were susceptible. Conclusions: Our study reports the largest collection of minocycline susceptibility findings in GNB. Minocycline showed in vitro activity against many difficult-to-treat GNB isolates, including ceftriaxone- and multidrug-resistant E. coli and some K. pneumoniae isolates, common Amp-C-producing species, and non-fermenting GNB, including Stenotrophomonas , Acinetobacter , and Achromobacter .
Positron Emission Tomography/Computed Tomography in Cardiac Implantable Electronic Device Infections: Insights From the Emerging Infections Network
McHugh, Jack , Cuervo, Guillermo, Abu-Zeinah, Khalid , Beekmann, Susan E. , Polgreen, Philip M. , Deshmukh, Abhishek J, Johnson, G B, Saleh, Omar M Abu, Baddour, L M, Baddour, Larry M. , Johnson, Geoffrey B. , Cuervo, Guillermo , Chesdachai, Supavit , McHugh, Jack , Cuervo, Guillermo , Abu-Zeinah, Khalid , Beekmann, Susan E , Polgreen, Philip M , Deshmukh, Abhishek J , Johnson, Geoffrey B , Abu Saleh, Omar , DeSimone, Daniel C , Baddour, Larry , Chesdachai, Supavit , Deshmukh, Abhishek , Saleh, Omar Abu , DeSimone, Daniel C.

Open Forum Infectious Diseases | March 3, 2026 | Volume: 13 | Issue: 3 | Pages: No page available

10.1093/ofid/ofag109 Get It

Abstract The practice patterns of fluorine 18–labeled fluorodeoxyglucose positron emission tomography/computed tomography ([18F] FDG PET/CT) use in cardiac implantable electronic device infection remain undefined. Among 258 Emerging Infections Network respondents, 69% reported never or rarely using [18F] FDG PET/CT. Limited access and insurance barriers were the most common obstacles.
Clinical Presentation, Management, and Outcomes of Mycobacterium Bovis Bacillus Calmette-Guérin (BCG) Infections: A Single-center Retrospective Review
Kim, Myeongji , Saleh, Omar M Abu, Almeida, Natalia E. Castillo , Wengenack, Nancy L. , Deml, Sharon M., Comba, Işın Y. , Abu Saleh, Omar , Castillo, Natalia E , Comba, Isin Y , Saleh, Omar Abu

Open Forum Infectious Diseases | February 14, 2026 | Volume: 13 | Issue: 3 | Pages: No page available

10.1093/ofid/ofag071 Get It

Abstract Background Intravesical Mycobacterium bovis bacillus Calmette-Guérin (BCG) is standard therapy for high-risk nonmuscle-invasive bladder cancer. However, M bovis infections can occur and are not well understood. We aimed to characterize clinical phenotypes, diagnosis, management, and outcomes of culture-confirmed M bovis BCG infections following intravesical therapy for urothelial carcinoma. Methods A retrospective single-center review of adults with culture-confirmed M bovis infection after intravesical BCG (May 2009–July 2024) was conducted, abstracting clinical, microbiologic, treatment, and outcome data. Results Twenty-two White male patients (median age, 77 years) were included; 8 (36.4%) had localized genitourinary infection, 6 (27.3%) had dissemination limited to blood, and 8 (36.4%) had dissemination to other organs. Patients with bloodstream-only infection presented acutely (median 1.5 days after last BCG), whereas those with localized or organ-disseminated disease presented months to years after BCG, with the longest diagnostic delays in organ-disseminated infection. Despite all cases had culture-proven M bovis BCG infection, acid-fast smear, Mycobacterium tuberculosis complex polymerase chain reaction, and histopathology had limited sensitivity. All isolates were susceptible to rifampin, isoniazid, and ethambutol; all were resistant to pyrazinamide. Median treatment duration exceeded 9 months, 94.7% achieved cure, and attributable mortality was 5.0% (1 vascular graft infection). Conclusions M bovis BCG infections following intravesical therapy have favorable outcomes but are often associated with diagnostic delays and prolonged treatment. Early suspicion, comprehensive diagnostic evaluation, and timely surgical source control when indicated are critical. Management strategies should be tailored based on the extent of disease dissemination and individual host factors.
Spaced learning versus traditional learning for pharmacists implementing β-lactam therapeutic drug monitoring
Moreland-Head, Lindsay N, Ausman, Sara E., Saleh, Omar Abu , Jannetto, Paul J. , Wessel, Rebecca J , Frazee, Erin N. , Abu Saleh, Omar , Ausman, Sara E , Rivera, Christina G.

American Journal of Health-System Pharmacy | August 28, 2025 | Volume: 83 | Issue: 6 | Pages: 294-302

10.1093/ajhp/zxaf227 Get It

Abstract Purpose No consistent recommendations exist on how best to educate pharmacists to facilitate implementation of new evidence-based practices. This study aimed to determine whether spaced learning was more effective than traditional education when learning a new evidence-based practice (β-lactam therapeutic drug monitoring, or TDM). Summary β-lactam TDM was implemented in a phased fashion at Mayo Clinic in Rochester. Two go-lives took place, separated by 6 months, which allowed for a natural experiment to test education delivery methods (traditional education in the first go-live group of pharmacists vs spaced learning in the second go-live group of pharmacists). Each group received the same base educational package, with pharmacists in the spaced learning group also offered monthly in-person sessions for 6 months before go-live to discuss key considerations and cases with experts. There was no difference between the spaced learning group and the traditional education group when assessing appropriate use of TDM as defined by (1) appropriate patient selection; (2) correct ordering of laboratory testing; (3) appropriate clinical action; and (4) completed documentation. Assessments of secondary knowledge transfer also showed no difference between the groups. Pharmacists in the different education groups had similar satisfaction scores related to the effect and utility of the education. Both spaced learning and traditional education were part of a comprehensive implementation plan for β-lactam TDM, which might have influenced the outcomes. Spaced learning for future pharmacist education efforts needs further study. Conclusion As part of a greater β-lactam TDM implementation effort, altering the education delivery method did not impact the degree of knowledge transfer.
Metagenomic Next-generation Sequencing of Cerebrospinal Fluid: First-year Experience at a Tertiary Referral Hospital
Mulett, Sergio Alvarez , Garcia, Sofia Molina , Saleh, Omar Abu , Rodning, Amanda A, Wengenack, Nancy L. , Patel, Robin , Alvarez Mulett, Sergio , Molina Garcia, Sofia , Abu Saleh, Omar , Wolf, Matthew J, Wengenack, Nancy L , Patel, Robin , Wolf, Matthew J, Norgan, Andrew P.

Clinical Infectious Diseases | July 16, 2025 | Volume: 82 | Issue: 5 | Pages: 808-814

10.1093/cid/ciaf390 Get It

Abstract Background Central nervous system (CNS) infections are significant causes of morbidity and mortality, especially when diagnosis is delayed. Traditional cerebrospinal fluid diagnostic methods for CNS infections have limited sensitivity. Metagenomic next-generation sequencing of cerebrospinal fluid (MSCSF) is a newer diagnostic tool capable of detecting a broad range of pathogens in a single assay. Methods This retrospective cohort study evaluated the first-year experience with MSCSF at Mayo Clinic. A total of 422 tests performed during calendar year 2024 on adult patients at Mayo Clinic facilities and those tested through Mayo Clinic Laboratories were analyzed, with a subcohort analysis of the 210 Mayo Clinic patients performed to define patient characteristics associated with positive results and clinical outcomes. Results The sensitivity of MSCSF for detecting neuroinfection in the subcohort was 64%, with 43% of confirmed neuroinfections diagnosed by MSCSF only. Subjects who were immunosuppressed (odds ratio [OR]: 3.5, P = .008) and those with a high pretest probability of CNS infection (OR: 20.1, P < .001) were more likely to have positive results. Also, those who tested positive were more likely to die within the ensuing 30 days than those who tested negative (OR: 5.2, P = .001). Conclusions MSCSF can be a valuable tool for diagnosing CNS infection but should not be used indiscriminately. It appears to be most beneficial when there is a high clinical suspicion of CNS infection and conventional diagnostics, and available molecular tests, yield negative results. Its integration into clinical practice should be guided by diagnostic stewardship to maximize cost-effectiveness and clinical utility.