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Venkataraman, Shilpa

https://orcid.org/0009-0008-4104-8664

Mayo Clinic

Mayo Clinic

Citations 1

Spatial Mass Spectrometry-Based Proteomic Analysis of Normal-Appearing Glomeruli from Young and Old Adults
Mangalaparthi, Kiran K. , Sachdeva, Gunveen S. , Shaik, Afsana Ansari , Venkataraman, Shilpa , Mullan, Aidan F. , Pujari, Ganesh P. , Madden, Benjamin , Asghar, Muhammad Sohaib , Sharma, Vidit , Alexander, Mariam P., Đenić, Aleksandar , Alexander, Mariam P. , Madden, Benjamin , Alexander, Mariam P , Larson, Nicholas B , Denic, Aleksandar , Pandey, Akhilesh , Rule, Andrew D , Asghar, Muhammad S , Mullan, Aidan , Larson, Nicholas B. , Pandey, Akhilesh , Rule, Andrew D. , Venkataraman, Shilpa

Kidney360 | October 1, 2025 | Volume: 6 | Issue: 12 | Pages: 2071-2081

10.34067/kid.0000000986 Get It

Key Points Increased protein expression of tissue inhibitor of metalloproteinase-3, glypican 6, synuclein γ , apolipoprotein A-4, and Ecto-5′-nucleotidase was observed in old adults compared with young adults. In old adults, overexpressed proteins were enriched in mitochondrial processes while under expressed proteins enriched in RNA metabolism. Validated differentially expressed proteins were not significantly correlated with kidney pathology after adjusting for age. Background Kidney aging is characterized by a loss of glomeruli, predominantly in the superficial cortex, with a resultant decline in GFR and an increased risk of various kidney-related diseases. The early molecular alterations in glomeruli associated with the aging process are not well studied. Methods We combined laser capture microdissection and mass spectrometry–based unbiased proteomic analysis of nonsclerosed, nonischemic glomeruli in the superficial cortex from young and old adults who underwent a radical nephrectomy for a tumor to understand the age-related molecular changes in glomeruli. Twenty-four young and 30 old adults were used for the discovery dataset, and the significant differentially expressed proteins were further validated using an independent set comprising six young and eight old adults. Results Kidneys from old adults had lower eGFR, less kidney parenchyma on computed tomography imaging, and more glomerulosclerosis and arteriosclerosis on histology. Quantitative proteomic analysis of nonsclerosed, nonischemic glomeruli identified increased expression of tissue inhibitor of metalloproteinase-3, glypican 6, synuclein γ , apolipoprotein A-4, and Ecto-5′-nucleotidase in old adults that were further validated in an independent set. Pathway analysis indicated that proteins with increased expression in old adults were enriched in mitochondrial translational processes, aerobic respiration, and TCA cycle, whereas proteins with decreased expression in old adults were enriched in mRNA splicing, mRNA processing, and nonsense mediated decay. Furthermore, validated differentially expressed proteins did not show any significant correlation with the kidney pathology independent of age group. Conclusions Overall, this study identified proteins that are specifically associated with the aging process in otherwise normal-appearing glomeruli.