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Farnan, Sheila

Mayo Clinic

Mayo Clinic

Citations 4

WITHDRAWN: Spatial Analysis of Placentae During Congenital Cytomegalovirus Infection Reveals Distinct Cellular Profiles in Immune Cells and Trophoblasts
Sintim-Aboagye, Elise, Sherman, W.B., Farnan, Sheila, Otrubova, Kamila, Verma, N, Littlefield, Dawn, Punia, Sohan, Blackstad, Mark, Schleiss, Mark R. , Enninga, Elizabeth Ann L. , Chakraborty, Rana , Quach, Huy Quang , Sherman, Will, Verma, Namisha, Schleiss, Mark R , Enninga, Elizabeth Ann L , Sherman, Will, Verma, Namisha, Johnson, Erica L. , Norgan, Andrew P. , Gray, Clive M.

No container title available | April 10, 2025 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.1101/2025.04.04.647170 Get It

Withdrawal Statement The authors have withdrawn the manuscript because the data it contained has been updated. Consequently, they request that this work should not be cited as a reference for any projects to ensure the use of the most current information. For any questions or further clarifications, readers are encouraged to contact the corresponding author directly
256. Characterization of the Placental Proteome during Congenital CMV Infection
Farnan, Sheila, Sintim-Aboagye, Elise, Punia, Sohan, Mejia-Plazas, Maria, Verma, N, Littlefield, Dawn, Rametse, Cosnet L., Robison, Jerid, Chakraborty, Rana , Schleiss, Mark R. , Quach, Huy Quang , Verma, Namisha, Johnson, Erica L. , Gray, Clive M. , Norgan, Andrew P. , Enninga, Elizabeth Ann L.

Open Forum Infectious Diseases | November 27, 2023 | Volume: 10 | Issue: Supplement_2 | Pages: No page available

10.1093/ofid/ofad500.328 Get It

Abstract Background The worldwide prevalence of cytomegalovirus (CMV) infection is estimated to be 83-100%.1,2 In pregnancy, transmission to the fetus can occur through the placenta with 0.4-2.3% of all newborns affected.3 The phenotype of congenital CMV (cCMV) has a spectrum of severity; 10-20% of exposed neonates show severe clinical manifestations.4 CMV has a wide range of tropism and can infect epithelial, myeloid, and endothelial cells. However, the cellular mechanisms of cCMV infection, and how they influence disease severity in exposed fetuses during gestation are not fully outlined,5 Here, we used the NanoString™ Digital Spatial Profiler (DSP) to characterize the cell-specific proteomic profile in placental tissue from infants with cCMV. Methods Placental tissue from 5 CMV-affected and 4 CMV-unaffected pregnancies were retrieved from the Mayo Clinic tissue repository. Immune cells were identified by CD45 positivity and cytotrophoblasts (CTBs) identified by CK7. The cell-specific proteome of these tissues was identified using the NanoString™ immune cell and cell death panels. Data was analyzed by NanoString™ GeoMx technology. Results Unsupervised clustering illustrated a distinct proteome in the immune cell compartment of CMV-positive compared to CMV-negative placental tissue (Figure 1). Linear Mixed Model (LMM) analysis revealed that immune cell related proteins were significantly overexpressed in CMV+ tissue as were four proteins associated with cell death: BIM, BCLXL, PARP, neurofibromin (Figure 2). Clustering did not demonstrate a distinct proteome in the CTB compartment (Figure 3), but LMM showed that two immune markers (CD44 and HLA-DR) and a cell death protein (BCL6) were overexpressed by CTBs in CMV+ tissue (Figure 4). The proteome of immune cells, and to a lesser extent in CTBs in CMV-infected placentae differs from CMV-uninfected placentae with overexpression of proteins associated with immune activation and cell death. With new screening initiatives set to improve identification of cCMV, our results provide a starting point to identify specific biomarkers and immune pathways associated with disease severity. These biomarkers and pathways may serve as novel antiviral targets in the treatment and management of cCMV. The proteome of immune cells, and to a lesser extent in CTBs in CMV-infected placentae differs from CMV-uninfected placentae with overexpression of proteins associated with immune activation and cell death. With new screening initiatives set to improve identification of cCMV, our results provide a starting point to identify specific biomarkers and immune pathways associated with disease severity. These biomarkers and pathways may serve as novel antiviral targets in the treatment and management of cCMV. Fig 3 - The proteome of immune cells, and to a lesser extent in CTBs in CMV-infected placentae differs from CMV-uninfected placentae with overexpression of proteins associated with immune activation and cell death. With new screening initiatives set to improve identification of cCMV, our results provide a starting point to identify specific biomarkers and immune pathways associated with disease severity. These biomarkers and pathways may serve as novel antiviral targets in the treatment and management of cCMV. Fig 4 - Volcano plot illustrating the differential proteomic expression in CK7+ tissue compartment of CMV-positive placental tissue compared to CMV-negative placental tissue. Conclusion The proteome of immune cells, and to a lesser extent in CTBs in CMV-infected placentae differs from CMV-uninfected placentae with overexpression of proteins associated with immune activation and cell death. With new screening initiatives set to improve identification of cCMV, our results provide a starting point to identify specific biomarkers and immune pathways associated with disease severity. These biomarkers and pathways may serve as novel antiviral targets in the treatment and management of cCMV. Disclosures Mark R. Schleiss, MD, Moderna Vaccines: Grant Support to my Division but no personal honoraria
Prevention of the Vertical Transmission of HIV; A Recap of the Journey so Far
Cárdenas, María C. , Farnan, Sheila, Hamel, Benjamin , Plazas, Maria C. Mejia , Sintim-Aboagye, Elise, Littlefield, Dawn, Punia, Sohan, Enninga, Elizabeth Ann L. , Temesgen, Zelalem , Theiler, Regan N. , Gray, Clive M. , Chakraborty, Rana , Cardenas, Maria Camila, Mejia Plazas, Maria Camila, Littlefield, Dawn R, Behl, Supriya, Enninga, Elizabeth Ann L , Theiler, Regan , Gray, Clive M , Chakraborty, Rana , Behl, Supriya , Johnson, Erica L.

Viruses | March 27, 2023 | Volume: 15 | Issue: 4 | Pages: 849

10.3390/v15040849 Get It

In 1989, one in four (25%) infants born to women living with HIV were infected; by the age of 2 years, there was 25% mortality among them due to HIV. These and other pieces of data prompted the development of interventions to offset vertical transmission, including the landmark Pediatric AIDS Clinical Trial Group Study (PACTG 076) in 1994. This study reported a 67.5% reduction in perinatal HIV transmission with prophylactic antenatal, intrapartum, and postnatal zidovudine. Numerous studies since then have provided compelling evidence to further optimize interventions, such that annual transmission rates of 0% are now reported by many health departments in the US and elimination has been validated in several countries around the world. Despite this success, the elimination of HIV’s vertical transmission on the global scale remains a work in progress, limited by socioeconomic factors such as the prohibitive cost of antiretrovirals. Here, we review some of the key trials underpinning the development of guidelines in the US as well as globally, and discuss the evidence through a historic lens.
Association Between Perioperative Costs and Induction Immunosuppression in Pediatric Liver Transplant Recipients
Ewing, Caroline , Farnan, Sheila, Squires, James E. , Squires, James E , Raghu, Vikram Kalathur

Journal of Pediatric Gastroenterology and Nutrition | February 3, 2023 | Volume: 76 | Issue: 5 | Pages: 634-639

10.1097/mpg.0000000000003728 Get It

Objectives:The objectives of this study was to describe variation in induction regimen, identify predictors of induction immunosuppression (IS) choice, and examine the impact of induction IS regimen on length of stay (LOS) and total perioperative costs in pediatric liver transplant recipients.Methods:We analyzed liver transplant utilization data in the Pediatric Health Information System database. Patients were divided into 3 induction IS groups: (1) steroids only, (2) T‐cell depleting antibody (TDA), and (3) non‐TDA. We identified predictors of induction IS regimen and examined associations between each outcome and choice of induction IS.Results:We analyzed 4905 liver transplant recipients (50% female, 80% under age 13 years, 42% non‐Hispanic White). Most patients (3162, 64%) received steroids only induction, and about twice as many patients received a non‐TDA regimen (1093, 22%) versus a TDA regimen (650, 13%). Median total perioperative costs were highest for the TDA group [$146,438 (interquartile range $113,461–$195,575)] versus the non‐TDA group [$129,307 ($102,632–$173,953)] and the steroids only group ($127,049 ($98,814–$181,053)]. Compared to steroids only induction, TDA was associated with increased LOS (+2 days, P = 0.017) with no difference in cost. Non‐TDA induction was associated with a decreased LOS (−3 days, P < 0.001) and increased cost (+$42,542; P < 0.001) independent of LOS.Conclusions:Compared to a steroids only induction IS regimen, non‐TDA induction was associated with increased total perioperative costs, even after adjustments for LOS. Future work will combine cost and outcome data to provide decision‐making support in pediatric liver transplant recipients.