Halder, Nabanita

Ex vivo liver perfusion (EVLP) sustains human or large animal livers outside the body under near-physiological conditions, enabling functional monitoring for lactate clearance, bile production, and oxygen consumption and allowing targeted therapeutic interventions. Originally developed to optimize donor grafts for transplantation, EVLP has evolved into a powerful translational research platform bridging preclinical discovery and early clinical translation. This review discusses EVLP as a platform for gene therapy, immunotherapy, pharmacology, and personalized medicine, with particular emphasis on gene- and immune-based interventions as mechanistically mature exemplars. We consolidate advances in pharmacological testing and toxicity modeling, viral and non-viral gene delivery, genome engineering, and immunomodulation using perfused livers. We further describe emerging applications, including autologous EVLP pathways for organ-confined therapy, ex vivo liver surgery, and bioengineering strategies such as biliary organoid repair, RNA interference, and mitochondrial transfer. We highlight how these applications align with a paradigm shift in biomedical research, including the NIH’s recent initiative to prioritize human-based experimental models over animal-only studies. By leveraging transplant-declined or surgically resected organs that would otherwise be unused, ex vivo perfusion bridges the gap between pre-clinical testing and clinical practice, enabling real-time evaluation of interventions in functional human tissue. We discuss both the scientific opportunities afforded by EVLP and the technical, biosafety, and ethical challenges that must be addressed to enable responsible clinical translation.

The immunosuppressive tumor microenvironment (TME) remains a major barrier to effective cancer immunotherapy. Among the central regulators of immune suppression, CD38, a multifunctional ectoenzyme and surface glycoprotein, has emerged as a pivotal orchestrator. CD38 is abundantly expressed on regulatory T cells (Tregs), regulatory B cells (Bregs), myeloid-derived suppressor cells (MDSCs), tumor-associated macrophages (TAMs), and tumor-associated neutrophils (TANs), where it enhances survival, metabolic fitness, and suppressive activity. Invariant natural killer T (iNKT) cells, which can either promote or suppress antitumor immunity, also express CD38 upon activation, suggesting a role for CD38 in directing their context-dependent fate within the TME. Mechanistically, CD38 regulates immune suppression through NAD + hydrolysis, calcium signaling, and promotion of fatty acid oxidation (FAO) while impairing effector T-cell glycolysis and mitochondrial fitness under chronic hypoxia—conditions that favor exhaustion rather than enhanced cytotoxicity. By depleting extracellular NAD + , CD38 diminishes glycolysis and mitochondrial oxidative phosphorylation in effector T cells, while sustaining regulatory cell persistence through FAO. Its enzymatic products, cyclic ADP-ribose (cADPR) and NAADP, further mobilize calcium fluxes that reinforce suppressive function. CD38 also integrates with hypoxia-driven pathways; in CD38 + Bregs, stabilization of HIF-1α and induction of FAO-related genes such as CPT1A and PPARα/γ promote angiogenesis, immune-evasion, and therapeutic resistance. Therapeutically, targeting CD38 with monoclonal-antibodies, small-molecule inhibitors, or combinations with checkpoint blockade and macrophage-reprogramming agents has shown promise. Such interventions reverse immune suppression, restore effector T cell activity, and enhance tumor responsiveness to immunotherapy. In summary, CD38 functions as both a metabolic regulator and an immunologic checkpoint, coordinating suppressive networks and shaping iNKT cell fate. These multifaceted roles position CD38 as a transformative target for next-generation immunotherapies.

e13121 Background: Metastatic breast cancer remains a major clinical challenge, characterized by poor prognosis and limited therapeutic options. The incidence of metastatic female breast cancer increased from 5.8 to 7.9 per 100,000 females from 2001 to 2021. The Hippo pathway effector YAP1 plays a critical role in driving tumor growth and metastasis in many cancers including breast but little is known about the gene-specific changes that occur when breast cancers have metastasized. This study aimed to investigate the extent of genomic alterations, including copy number alterations (CNAs) and mutations, in YAP1 and its downstream genes in metastatic breast cancer compared to nonmetastatic breast cancer. Methods: Genomic data for the YAP1 gene and its downstream target genes (CTGF, Cyr61, MCL-1, TOP2A, FOSL2, and ANKRD1) were obtained from cBioPortal. This included mutation data and CNA data, considering both amplifications and deletions as CNA events. The chi-square test was performed using GraphPad Prism 10 to compare the frequencies of mutations and CNAs between metastatic and non-metastatic breast cancer cases. Results: A total of 2390 samples of metastatic breast cancer and 9289 samples of non-metastatic breast cancer were analyzed for mutations. Among them, a significantly higher percentage of mutations in the YAP1 (P ≤ 0.0001), ANKRD1 (P ≤ 0.0001), MCL-1 (P ≤ 0.0001), and TOP2A (P ≤ 0.0001) genes was observed in metastatic breast cancer compared to non-metastatic breast cancer. Evaluating CNAs in 2197 cases in the metastatic breast cancer group compared to 9289 cases in the non-metastatic breast cancer group demonstrated a significantly higher frequency of CNAs in the YAP1 ( P ≤ 0.0001), Cyr61 (P ≤ 0.0001), CTGF ( P ≤ 0.0001), ANKRD1 ( P ≤ 0.0001), TOP2A (P ≤ 0.0001) and FOSL2 (P ≤ 0.0001) genes among metastatic breast cancer. Conclusions: This study revealed significant genomic alterations in the YAP1 gene and its downstream genes in metastatic breast cancer. These findings highlight the importance of the YAP1 pathway in breast cancer metastasis and suggest that targeting this pathway may have therapeutic potential for primary and metastatic breast cancer. Frequency of mutations and copy number alterations (CNAs) in metastatic vs. non-metastatic breast cancer. Gene Metastatic Breast Cancer Mutation Frequency (%) Non-Metastatic Breast Cancer Mutation Frequency (%) P-value Metastatic Breast Cancer CNA Frequency (%) Non-Metastatic Breast Cancer CNA Frequency (%) P-value YAP1 0.75 0.17 <0.0001 5.1 1.18 <0.0001 CTGF 0.13 0.18 0.781 5.42 0.65 <0.0001 Cyr61 0.17 0.16 0.999 3.9 0.65 <0.0001 MCL-1 0.63 0.11 <0.0001 10.74 11.93 0.121 ANKRD1 1.17 0.09 <0.0001 1.96 0.25 <0.0001 TOP2A 0.96 0.18 <0.0001 8.06 3.6 <0.0001 FOSL2 0.17 0.1 0.317 3.64 0.62 <0.0001

Abstract Purpose: Development of B-cell lymphoma 2 (BCL-2)–specific inhibitors poses unique challenges in drug design because of BCL-2 homology domain 3 (BH3) shared homology between BCL-2 family members and the shallow surface of their protein–protein interactions. We report herein discovery and extensive preclinical investigation of lisaftoclax (APG-2575). Experimental Design: Computational modeling was used to design “lead” compounds. Biochemical binding, mitochondrial BH3 profiling, and cell-based viability or apoptosis assays were used to determine the selectivity and potency of BCL-2 inhibitor lisaftoclax. The antitumor effects of lisaftoclax were also evaluated in several xenograft models. Results: Lisaftoclax selectively binds BCL-2 (Ki &lt; 0.1 nmol/L), disrupts BCL-2:BIM complexes, and compromises mitochondrial outer membrane potential, culminating in BAX/BAK-dependent, caspase-mediated apoptosis. Lisaftoclax exerted strong antitumor activity in hematologic cancer cell lines and tumor cells from patients with chronic lymphocytic leukemia, multiple myeloma, or Waldenström macroglobulinemia. After lisaftoclax treatment, prodeath proteins BCL-2‒like protein 11 (BIM) and Noxa increased, and BIM translocated from cytosol to mitochondria. Consistent with these apoptotic activities, lisaftoclax entered malignant cells rapidly, reached plateau in 2 hours, and significantly downregulated mitochondrial respiratory function and ATP production. Furthermore, lisaftoclax inhibited tumor growth in xenograft models, correlating with caspase activation, poly (ADP-ribose) polymerase 1 cleavage, and pharmacokinetics of the compound. Lisaftoclax combined with rituximab or bendamustine/rituximab enhanced antitumor activity in vivo. Conclusions: These findings demonstrate that lisaftoclax is a novel, orally bioavailable BH3 mimetic BCL-2–selective inhibitor with considerable potential for the treatment of certain hematologic malignancies.