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Banerjee, Imon

0000-0002-3327-8004

Mayo Clinic

Department of Radiology (I.B.), Mayo Clinic, Phoenix, AZ.

Citations 48

SCGAN: Sparse CounterGAN for Counterfactual Explanations in Breast Cancer Prediction
Zhou, Siqiong , Islam, Upala J., Pfeiffer, Nicholaus, Banerjee, Imon , Iquebal, Ashif Sikandar , Banerjee, Imon , Patel, Bhavika

IEEE Transactions on Automation Science and Engineering | November 23, 2023 | Volume: 21 | Issue: 3 | Pages: 2264-2275

10.1109/tase.2023.3333788 Get It

Artificial Intelligence-Based Prediction of Cardiovascular Diseases from Chest Radiography
Farina, Juan M. , Pereyra, Milagros , Mahmoud, Ahmed , Scalia, Isabel G. , Abbas, Mohammed Tiseer , Barry, Timothy , Ayoub, Chadi , Banerjee, Imon , Arsanjani, Reza , Barry, Timothy , Arsanjani, Reza , Banerjee, Imon , Farina, Juan M , Pereyra, Milagros , Mahmoud, Ahmed K , Scalia, Isabel G , Abbas, Mohammed Tiseer , Chao, Chieh‐Ju

Journal of Imaging | October 27, 2023 | Volume: 9 | Issue: 11 | Pages: 236

10.3390/jimaging9110236 Get It

Chest radiography (CXR) is the most frequently performed radiological test worldwide because of its wide availability, non-invasive nature, and low cost. The ability of CXR to diagnose cardiovascular diseases, give insight into cardiac function, and predict cardiovascular events is often underutilized, not clearly understood, and affected by inter- and intra-observer variability. Therefore, more sophisticated tests are generally needed to assess cardiovascular diseases. Considering the sustained increase in the incidence of cardiovascular diseases, it is critical to find accessible, fast, and reproducible tests to help diagnose these frequent conditions. The expanded focus on the application of artificial intelligence (AI) with respect to diagnostic cardiovascular imaging has also been applied to CXR, with several publications suggesting that AI models can be trained to detect cardiovascular conditions by identifying features in the CXR. Multiple models have been developed to predict mortality, cardiovascular morphology and function, coronary artery disease, valvular heart diseases, aortic diseases, arrhythmias, pulmonary hypertension, and heart failure. The available evidence demonstrates that the use of AI-based tools applied to CXR for the diagnosis of cardiovascular conditions and prognostication has the potential to transform clinical care. AI-analyzed CXRs could be utilized in the future as a complimentary, easy-to-apply technology to improve diagnosis and risk stratification for cardiovascular diseases. Such advances will likely help better target more advanced investigations, which may reduce the burden of testing in some cases, as well as better identify higher-risk patients who would benefit from earlier, dedicated, and comprehensive cardiovascular evaluation.
Challenges and solutions of echocardiography generalization for deep learning: a study in patients with constrictive pericarditis
Jeong, Jiwoong , Pelkey, Melissa N. , Chen, Yi‐Chieh , Ramzan, Raheel N., Elbahnasawy, Mohammad , Sleem, Mohamed, Grogan, Martha , Kane, Garvan C. , Patel, Bhavik N. , Oh, Jae K. , Banerjee, Imon , Chao, Chieh-Ju , Arsanjani, Reza , Kim, Kihong, Pelkey, Melissa N , Chen, Yi-Chieh , Farina, Juan Maria M, Banerjee, Imon , Chao, Chieh‐Ju , Arsanjani, Reza , Kim, Kihong , Farina, Juan M.

Journal of Medical Imaging | October 12, 2023 | Volume: 10 | Issue: 05 | Pages: No page available

10.1117/1.jmi.10.5.054502 Get It

Evolution of Breast Cancer Recurrence Risk Prediction: A Systematic Review of Statistical and Machine Learning–Based Models
Haji, Hasna El , Souadka, Amine , Patel, Bhavik N. , Sbihi, Nada , Ramasamy, Gokul , Patel, Bhavika , Ghogho, Mounir , Banerjee, Imon , El Haji, Hasna , Patel, Bhavika K , Banerjee, Imon

JCO Clinical Cancer Informatics | August 11, 2023 | Volume: No volume available | Issue: 7 | Pages: No page available

10.1200/cci.23.00049 Get It

PURPOSE Selection of appropriate adjuvant therapy to ultimately reduce the risk of breast cancer (BC) recurrence is a challenge for medical oncologists. Several automated risk prediction models have been developed using retrospective clinical data and have evolved significantly over the years in terms of predictors of recurrence, data usage, and predictive techniques (statistical/machine learning [ML]). METHODS Following PRISMA guidelines, we performed a systematic literature review of the aforementioned statistical and ML models published between January 2008 and December 2022 through searching five digital databases—PubMed, ScienceDirect, Scopus, Cochrane, and Web of Science. The comprehensive search yielded a total of 163 papers and after a screening process focusing on papers that dealt exclusively with statistical/ML methods, only 23 papers were deemed appropriate for further analysis. We benchmarked the studies on the basis of development, evaluation metrics, and validation strategy with an added emphasis on racial diversity of patients included in the studies. RESULTS In total, 30.4% of the included studies use statistical techniques, while 69.6% are ML-based. Among these, traditional ML models (support vector machines, decision tree, logistic regression, and naïve Bayes) are the most frequently used (26.1%) along with deep learning (26.1%). Deep learning and ensemble learning provide the most accurate predictions (AUC = 0.94 each). CONCLUSION ML-based prediction models exhibit outstanding performance, yet their practical applicability might be hindered by limited interpretability and reduced generalization. Moreover, predictive models for BC recurrence often focus on limited variables related to tumor, treatment, molecular, and clinical features. Imbalanced classes and the lack of open-source data sets impede model development and validation. Furthermore, existing models predominantly overlook African and Middle Eastern populations, as they are trained and validated mainly on Caucasian and Asian patients.
Fusion of imaging and non-imaging data for disease trajectory prediction for coronavirus disease 2019 patients
Tariq, Amara , Sakhi, Hifza, Newsome, Janice , Trivedi, Hari , Banerjee, Imon , Sakhi, Hifza , Rubin, Daniel L , Trivedi, Hari , Gichoya, Judy W. , Banerjee, Imon , Tang, Siyi , Celi, Leo Anthony , Rubin, Daniel L. , Gichoya, Judy Wawira

Journal of Medical Imaging | June 28, 2023 | Volume: 10 | Issue: 03 | Pages: No page available

10.1117/1.jmi.10.3.034004 Get It

Graph-Based Fusion of Imaging and Non-Imaging Data for Disease Trajectory Prediction
Tariq, Amara , Sakhi, Hifza, Newsome, Janice , Trivedi, Hari , Patel, Bhavik N. , Banerjee, Imon , Banerjee, Imon , Trivedi, Hari , Tang, Siyi , Celi, Leo Anthony , Rubin, Daniel L. , Gichoya, Judy Wawira

2023 11th International IEEE/EMBS Conference on Neural Engineering (NER) | May 19, 2023 | Volume: No volume available | Issue: No issue available | Pages: 1-4

10.1109/ner52421.2023.10123892 Get It

Adversarial Debiasing techniques towards ‘fair’ skin lesion classification
Correa-Medero, Ramon, Banerjee, Imon , Banerjee, Imon , Patel, Bhavik

2023 11th International IEEE/EMBS Conference on Neural Engineering (NER) | May 19, 2023 | Volume: No volume available | Issue: No issue available | Pages: 1-4

10.1109/ner52421.2023.10123788 Get It

MedShift: Automated Identification of Shift Data for Medical Image Dataset Curation
Guo, Xiaoyuan , Gichoya, Judy Wawira , Trivedi, Hari , Purkayastha, Saptarshi , Banerjee, Imon , Gichoya, Judy W. , Purkayastha, Saptarshi , Banerjee, Imon , Trivedi, Hari

IEEE Journal of Biomedical and Health Informatics | May 11, 2023 | Volume: 27 | Issue: 8 | Pages: 3936-3947

10.1109/jbhi.2023.3275104 Get It

Graph convolutional network-based fusion model to predict risk of hospital acquired infections
Tariq, Amara , Lancaster, Lin, Elugunti, Praneetha, Siebeneck, Eric, Banerjee, Imon , Patel, Bhavik N. , Moriarty, James, Banerjee, Imon , Siebeneck, Eric, Noe, Katherine H. , Borah, Bijan J. , Moriarty, James P.

Journal of the American Medical Informatics Association | April 7, 2023 | Volume: 30 | Issue: 6 | Pages: 1056-1067

10.1093/jamia/ocad045 Get It

Abstract Objective Hospital acquired infections (HAIs) are one of the top 10 leading causes of death within the United States. While current standard of HAI risk prediction utilizes only a narrow set of predefined clinical variables, we propose a graph convolutional neural network (GNN)-based model which incorporates a wide variety of clinical features. Materials and Methods Our GNN-based model defines patients’ similarity based on comprehensive clinical history and demographics and predicts all types of HAI rather than focusing on a single subtype. An HAI model was trained on 38 327 unique hospitalizations while a distinct model for surgical site infection (SSI) prediction was trained on 18 609 hospitalization. Both models were tested internally and externally on a geographically disparate site with varying infection rates. Results The proposed approach outperformed all baselines (single-modality models and length-of-stay [LoS]) with achieved area under the receiver operating characteristics of 0.86 [0.84–0.88] and 0.79 [0.75–0.83] (HAI), and 0.79 [0.75–0.83] and 0.76 [0.71–0.76] (SSI) for internal and external testing. Cost-effective analysis shows that the GNN modeling dominated the standard LoS model strategy on the basis of lower mean costs ($1651 vs $1915). Discussion The proposed HAI risk prediction model can estimate individualized risk of infection for patient by taking into account not only the patient’s clinical features, but also clinical features of similar patients as indicated by edges of the patients’ graph. Conclusions The proposed model could allow prevention or earlier detection of HAI, which in turn could decrease hospital LoS and associated mortality, and ultimately reduce the healthcare cost.
Artificial Intelligence in Breast Imaging: Challenges of Integration Into Clinical Practice
Ozcan, B. Bersu , Patel, Bhavika , Banerjee, Imon , Patel, Bhavika K , Dogan, Basak E , Banerjee, Imon

Journal of Breast Imaging | March 7, 2023 | Volume: 5 | Issue: 3 | Pages: 248-257

10.1093/jbi/wbad007 Get It

Abstract Artificial intelligence (AI) in breast imaging is a rapidly developing field with promising results. Despite the large number of recent publications in this field, unanswered questions have led to limited implementation of AI into daily clinical practice for breast radiologists. This paper provides an overview of the key limitations of AI in breast imaging including, but not limited to, limited numbers of FDA-approved algorithms and annotated data sets with histologic ground truth; concerns surrounding data privacy, security, algorithm transparency, and bias; and ethical issues. Ultimately, the successful implementation of AI into clinical care will require thoughtful action to address these challenges, transparency, and sharing of AI implementation workflows, limitations, and performance metrics within the breast imaging community and other end-users.