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28 citation(s) found for "Chen, Quan".

Multimodal Slice Interaction Network Enhanced by Transfer Learning for Precise Segmentation of Internal Gross Tumor Volume in Lung Cancer PET/CT Imaging
Luo, Yi , Guo, Yike, Zhang, Rui , Ngwa, Wil, Zhou, Zongwei, Ding, Kai , Hooshangnejad, Hamed , Feng, Xue, Chen, Quan , Ngwa, Wilfred , Zhou, Zongwei , Ding, Kai

Mayo Clinic

2026 IEEE 14th International Conference on Healthcare Informatics (ICHI) | August 12, 2026 | Volume: No volume available | Issue: No issue available | Pages: 525-534

10.1109/ichi69079.2026.00072 Get It

Evaluation of AI‐derived LAD artery dose metrics for survival stratification in stage III NSCLC: A secondary analysis of RTOG 0617 trial
Zhu, Libing, Rong, Yi, Bai, Yun, Yu, Nathan Y., Chen, Quan, Zhu, Libing , Tao, Randa , Yu, Nathan Y.

Mayo Clinic

Medical Physics | August 3, 2026 | Volume: 53 | Issue: 8 | Pages: No page available

10.1002/mp.70621 | PMID 42545172 Get It

Abstract Background While the radiation dose to left anterior descending (LAD) artery is associated with overall survival (OS) in NSCLC patients, manual segmentation is labor‐intensive. Several auto‐segmentation models were developed on average 4DCT with promising geometric agreement, yet their feasibility in clinical outcome analysis on lung CT remains unclear. Purpose This study evaluates whether automated LAD segmentation can reproduce, at the group level, the established dose‐survival association in a multi‐institutional clinical trial dataset. Methods Three deep learning‐based auto‐segmentation (DLAS) models for automatic segmentation of the LAD coronary artery were applied to 460 patients from the NRG Oncology/RTOG 0617 dataset. Kaplan–Meier curves and Cox proportional hazard ratio (HR) were calculated using each model's segmentation. The LAD V15 Gy was used to stratify patients into high‐and low‐risk groups, and the cut‐off values were determined by minimizing mean absolute error (MAE) between DLAS‐derived and manual OS curves. Results All three models demonstrated significantly different OS curves between the high risk and low risk groups ( p < 0.05). The HR was 1.40 (95% CI: 1.02–1.93; p = 0.0381; MAE = 7.1%), 1.32 (95% CI: 1.03–1.68; p = 0.0258; MAE = 9.6%), and 1.37 (95% CI: 1.03–1.84; p = 0.0331; MAE = 7.9%) for the three models using a common V15 Gy ≥ 10% cut‐off. After optimizing the cut‐off, one model aligned well with what was derived from manual segmentation (MAE = 4.3%). Conclusion Among the evaluated models, one DL model showed the strongest performance of survival groups separation and achieved group‐level overall survival stratification comparable to that previously reported using manual contours in the multi‐institutional cohort. Further validation with paired manual contours and pre‐specified cutoffs is warranted.
AI‐surrogate structure and dose correlation for left anterior descending artery in lung stereotactic body radiotherapy
Chang, Grace, Chen, Quan, Zhu, Libing, Rong, Yi, Yu, Nathan Y., Tao, Randa , Zhu, Libing, Yu, Nathan Y.

Mayo Clinic

Journal of Applied Clinical Medical Physics | July 8, 2026 | Volume: 27 | Issue: 7 | Pages: No page available

10.1002/acm2.70703 | PMID 42418215 Get It

Abstract Background The left anterior descending (LAD) coronary artery is a critical organ‐at‐risk in thoracic radiotherapy. In thoracic stereotactic body radiation therapy (SBRT), sharp dose gradients and poor LAD contrast on 4DCT scans introduce uncertainty in LAD dose assessment. Methods We evaluated the performance of an AI‐generated LAD region structure as a surrogate for manual LAD contours in early‐stage NSCLC. We used deep inspiration breath hold (DIBH) scans from 49 patients with manually delineated LADs; planning risk volume contours were expanded by 3 mm. Then, 96 lung SBRT dose maps were registered by matching the left anterior portion of the heart contours. Dice similarity coefficient (DSC), inclusion ratios (IR), dose–volume histogram (DVH) metrics, linear regression, and linear mixed models were used to compare the structures. The correlation of the AI LAD region and LAD dose to mean heart dose (MHD) was assessed. Results The AI LAD region showed strong correlation with manual LAD contours for maximum dose (D1%, R 2 = 0.93) and volume receiving ≥10 Gy (V10Gy, R 2 = 0.81). The planning risk volume also demonstrated high correlation to the AI LAD region. MHD was a poor predictor of LAD dose ( R 2 ≈0.4). Additional dose metric correlations were assessed. Discussion To investigate dose volume effects to the LAD during radiotherapy for stage I NSCLC, a robust segmentation paradigm must be established. It must be easily implementable on typical imaging acquired during treatment, with an emphasis on clinical translatability. Our model has shown that the AI LAD region has a strong correlation with LAD dose under typical lung SBRT doses and supports its use for further investigation into LAD dose volume constraints during lung SBRT. Conclusion AI LAD region provides a clinically feasible and scalable alternative to manual LAD contouring for dose estimation in lung SBRT. Its strong correlation with key dose metrics validates its use in large‐scale retrospective and prospective studies.
Hybrid Curriculum Learning for Data-Efficient Lung Nodule Detection with YOLOv11
Luo, Yi , Guo, Yike, Hooshangnejad, Hamed , Feng, Xue , Chen, Quan, Zhou, Zongwei , Chen, Yaxi , Hu, Yipeng, Zhang, Rui, Ding, Kai , Feng, Xue , Ding, Kai , Zhou, Zongwei

Mayo Clinic

Diagnostics | May 11, 2026 | Volume: 16 | Issue: 10 | Pages: 1441

10.3390/diagnostics16101441 | PMID 42196807 Get It

Background/Objectives: Accurate detection of pulmonary nodules on chest CT is critical for lung cancer screening, yet training robust detectors remains challenging due to the high cost of reliable annotations. In this work, we present a systematic study of curriculum learning for CT-based lung nodule detection on the enhanced LUNA25 benchmark and propose a hybrid curriculum learning framework for data-efficient optimization. Methods: Our approach estimates sample difficulty by fusing clinically interpretable handcrafted factors such as nodule size and count with model-driven signals such as prediction confidence from a teacher model, and constructs a three-stage progressive training curriculum from easy to hard samples. Using YOLOv11s as a strong baseline, the proposed hybrid curriculum is compared against conventional training without curriculum learning and against single-source curricula. Results: On the held-out LUNA25 test set, hybrid curriculum learning increases mAP50 from 0.672 to 0.696, mAP50–95 from 0.369 to 0.385, recall from 0.588 to 0.634, and precision from 0.725 to 0.764. Extensive data-efficiency experiments with proportional reductions (1/2, 1/5, 1/10) and fixed training samples (5000–40,000 slices) further confirm consistent gains across limited-data regimes. Conclusions: These results demonstrate that jointly leveraging intrinsic image complexity and optimization-aware feedback provides effective sample scheduling for robust and data-efficient lung nodule detection.
Monte Carlo–based optimization of CTV‐to‐PTV margins for image‐guided VMAT prostate radiotherapy
Chen, Quan, Ammar, Ali, Yu, Nathan Y., Zhu, Libing, Vargas, Carlos E., Zhu, Libing , Yu, Nathan Y. , Rong, Yi , Vargas, Carlos E.

Mayo Clinic

Medical Physics | March 31, 2026 | Volume: 53 | Issue: 4 | Pages: No page available

10.1002/mp.70415 | PMID 41912350 Get It

Abstract Background The van Herk margin formula, derived for 3‐D conformal radiotherapy with a uniform 3.2 mm dose penumbra and no intrinsic dose buffer, remains widely used to design CTV‐to‐PTV expansions in contemporary image‐guided prostate radiotherapy. However, coplanar VMAT techniques often feature broader penumbrae and explicit PTV–isodose clearances, potentially violating the assumptions underlying the original formulation and leading to overly conservative margins. Purpose We investigated whether the widely adopted van Herk margin formula overestimates clinical target volume (CTV)‐to‐planning target volume (PTV) expansions for contemporary coplanar volumetric modulated arc therapy (VMAT) prostate treatments. Methods Fifty consecutive intact‐prostate VMAT radiotherapy plans (two coplanar arcs; clinical margins 3 mm, except for 2 mm posterior) were exported. Direction‐specific 90% isodose–to‐PTV gaps and penumbra widths were measured. Candidate anisotropic margins were tested by eroding the PTV to create CTV_eval. Monte‐Carlo simulations combined systematic (Σ) shifts with Gaussian random (σ′) blurring kernels of 0–2 mm were performed. Acceptability criteria of (i) CTV Dmin0.03 cc ≥ 90% Rx in ≥ 90% of simulated scenarios or (ii) population tumor‐control probability (TCP) loss < 1 % were used. Results VMAT plans exhibited intrinsic 90% isodose clearances of 3–5 mm laterally/anteriorly and 1–2 mm superior–inferiorly, while axial‐plane penumbras were up to fivefold broader than van Herk's assumption. With a [0, 0, 2] mm (LR/AP/SI) margin, ≥ 90% of patients maintained Dmin0.03 cc ≥ 90% Rx provided Σ lay within an ellipsoid of [2.0, 1.5, 1.8] mm and σ′ ≤ [1.5, 2.0, 1.5] mm. Under TCP criteria the safe Σ ellipsoid for high‐risk disease was [2.5, 1.9, 2.2] mm, while low‐intermediate risk was even less sensitive. Conclusions For image‐guided coplanar VMAT prostate radiotherapy, an anisotropic [0, 0, 2] mm CTV‐to‐PTV margin is sufficient for target coverage. A modified margin expression that subtracts the measured isodose–to‐PTV gap and uses reduced random‐error coefficients better reflects modern practice.
Four‐year experience with an in‐house treatment management platform to streamline departmental operations in radiation oncology
Chang, G., Rong, Yi , Buckey, Courtney, Susen, Matthew, Lara, Pedro R., Lemish, Pamela R., Boutis, Gregory S., Chen, Quan, Chang, Grace N , Susen, Matthew J, Clouser, Edward L, Rong, Yi , Buckey, C, Lara, Pedro, Clouser, Edward

Mayo Clinic

Journal of Applied Clinical Medical Physics | March 9, 2026 | Volume: 27 | Issue: 3 | Pages: No page available

10.1002/acm2.70515 | PMID 41733442 Get It

Abstract Purpose To develop and implement an in‑house treatment‑management platform to improve communication, data accessibility, and task tracking across a radiation oncology department. Methods We developed Capsule, a custom software platform that centralizes patient data from the ARIA oncology information system (Varian Medical Systems, Palo Alto, United States), and integrates it with data from Outlook (Microsoft, Redmond, United States), spreadsheets, and manual inputs. Built using C#, SQL, and the .NET framework, it features a graphical interface in XAML with twelve modular tools to support workflows across a large multi‐modality department. A formal validation, feedback, and maintenance cycle was established. Its impact on workflow efficiency was evaluated using average CarePath task duration before and after implementation, supplemented by user interviews and surveys. Results The Department Schedule, Treatment Planning and On‐Treatment Whiteboard, Spreadsheet, and various workload tracking modules emerged as the most frequently used among dosimetrists surveyed.The Whiteboard module consolidates planning metadata for streamlined workflows. Workload and scheduling modules help distribute tasks fairly. The Department Schedule module centralizes daily role and contact information. The Spreadsheet module allows dosimetrists to identify a reference for unique plans and provides secure access to large exportable tabulated patient data and clinical trends. Other modules support proton down‐time replanning and special procedure physics assignment. One year after Capsule's implementation, most tasks in the external beam radiation therapy workflow experienced a reduction in average duration. Discussion Capsule streamlines workflows by integrating multiple tools into a single platform, supporting urgent scenarios, and improving task hand‐off. Its modular design allows customization to local workflows, but implementation must be guided by institutional oversight and formal quality management to ensure data security and compliance. Conclusion Capsule can provide a solution for improved workflow efficiency, communication, and interdisciplinary coordination. By democratizing access to routine and retrospective data, it supports treatment planning, scheduling, and quality improvement. Ongoing updates are essential as clinical practices evolve.
Multiscale Segmentation-Guided Diffusion Model for CBCT-to-CT Synthesis
Guo, Yike, Luo, Yi , Hooshangnejad, Hamed , Zhang, Rui , Feng, Xue , Chen, Quan , Ngwa, Wilfred , Ding, Kai , Chen, Quan , Feng, Xue , Ding, Kai , Guo, Yike

Mayo Clinic

Life | December 8, 2025 | Volume: 15 | Issue: 12 | Pages: 1871

10.3390/life15121871 | PMID 41465810 Get It

To improve synthetic CT (sCT) generation from cone-beam CT (CBCT) in radiotherapy, we propose a multiscale segmentation-guided diffusion framework. The proposed model integrates anatomical priors across multiple spatial resolutions through a segmentation mask pyramid and introduces a scale-specific loss function to guide learning at each level. When evaluated on the SynthRAD2023 brain dataset, our model achieves a mean absolute error (MAE) of 61.82 HU, a peak signal-to-noise ratio (PSNR) of 32.05 dB, and a structural similarity index (SSIM) of 0.90, outperforming baseline models. These results suggest that multiscale anatomical guidance can improve the fidelity and anatomical consistency of sCT images, thus facilitating high-quality CBCT-to-CT translation in radiotherapy applications.
Deep Learning for CT Synthesis in Radiotherapy
Guo, Yike, Luo, Yi , Hooshangnejad, Hamed , Zhang, Rui , Feng, Xue , Chen, Quan , Ngwa, Wilfred , Ding, Kai , Chen, Quan , Feng, Xue , Ding, Kai , Guo, Yike

Mayo Clinic

Bioengineering | November 25, 2025 | Volume: 12 | Issue: 12 | Pages: 1297

10.3390/bioengineering12121297 | PMID 41463594 Get It

With the rapid development of artificial intelligence (AI), various deep learning (DL) methods have been introduced into radiation oncology. Among them, the generation of synthetic Computed Tomography (sCT) images has attracted increasing attention, as it supports different clinical scenarios, from image-guided adaptive radiotherapy (IGART) to the simulation-free workflow. This review provides a comprehensive overview of recent studies on DL-based sCT synthesis in radiotherapy from multiple imaging modalities, including Cone-Beam CT (CBCT), Magnetic Resonance Imaging (MRI), and diagnostic CT, and discusses their clinical applications in CBCT-based online adaptive radiotherapy, MRI-guided radiotherapy, and simulation-free workflows. We also examine the architectures of representative DL models such as convolutional neural networks (CNNs) and generative adversarial networks (GANs) and summarize emerging training strategies. Finally, we discuss current challenges of clinical translation of DL algorithms into clinical practice and suggest potential directions for future research. Overall, this paper highlights the potential of AI-driven sCT generation to advance treatment planning by reducing imaging burden, improving dose accuracy, and accelerating workflow efficiency, thus ultimately improving the treatment outcome of patient care.
A Language Vision Model Approach for Automated Tumor Contouring in Radiation Oncology
Luo, Yi , Hooshangnejad, Hamed , Feng, Xue , Huang, Gaofeng , Chen, X. R. , Zhang, Rui , Chen, Quan , Ngwa, Wil, Ding, Kai , Chen, Quan , Chen, Xiaojian , Feng, Xue , Ding, Kai , Ngwa, Wilfred

Mayo Clinic

Bioengineering | August 7, 2025 | Volume: 12 | Issue: 8 | Pages: 835

10.3390/bioengineering12080835 | PMID 40868348 Get It

Background: Lung cancer ranks as the leading cause of cancer-related mortality worldwide. The complexity of tumor delineation, crucial for radiation therapy, requires expertise often unavailable in resource-limited settings. Artificial Intelligence (AI), particularly with advancements in deep learning (DL) and natural language processing (NLP), offers potential solutions yet is challenged by high false positive rates. Purpose: The Oncology Contouring Copilot (OCC) system is developed to leverage oncologist expertise for precise tumor contouring using textual descriptions, aiming to increase the efficiency of oncological workflows by combining the strengths of AI with human oversight. Methods: Our OCC system initially identifies nodule candidates from CT scans. Employing Language Vision Models (LVMs) like GPT-4V, OCC then effectively reduces false positives with clinical descriptive texts, merging textual and visual data to automate tumor delineation, designed to elevate the quality of oncology care by incorporating knowledge from experienced domain experts. Results: The deployment of the OCC system resulted in a 35.0% reduction in the false discovery rate, a 72.4% decrease in false positives per scan, and an F1-score of 0.652 across our dataset for unbiased evaluation. Conclusions: OCC represents a significant advance in oncology care, particularly through the use of the latest LVMs, improving contouring results by (1) streamlining oncology treatment workflows by optimizing tumor delineation and reducing manual processes; (2) offering a scalable and intuitive framework to reduce false positives in radiotherapy planning using LVMs; (3) introducing novel medical language vision prompt techniques to minimize LVM hallucinations with ablation study; and (4) conducting a comparative analysis of LVMs, highlighting their potential in addressing medical language vision challenges.
Development of a hybrid automated chart checking, data collection, and analysis system
Clouser, Edward , Chen, Quan , Harrington, Daniel P. , Rong, Yi , Buckey, C, Clouser, Edward L, Buckey, Courtney R, Rong, Yi , Clouser, Edward Lee

Mayo Clinic

Journal of Applied Clinical Medical Physics | July 14, 2025 | Volume: 26 | Issue: 7 | Pages: No page available

10.1002/acm2.70161 | PMID 40657668 Get It

Abstract Purpose To describe the creation and clinical deployment of an integrated stand‐alone hybrid automated chart review platform that is comprised of a database, oncology information system (OIS) interfaces, and a user interface (UI). Methods A consensus checklist was developed to homogenize the practices of clinical physics staff and physics residents for all plan types. Critical review of the single checklist's items led to the creation of a new concept, the “plan attribute,” which permits specialization of the final checklist based on the characteristics of a particular plan. Only relevant and applicable tests are automatically populated to form a plan checklist based on plan attributes. Each populated checklist in this hybrid automation platform includes elements of full automation, steps or functions that use automation to augment a human input or effort, as well as steps completed by humans. Logging and categorizing of deficiencies found during the chart check was also implemented. Results Chart check data was analyzed for an over 4‐year time span starting from the clinical deployment of the tool in October 2020. This analysis included a total of 427 073 tests spread among 7882 initial chart checks. The recorded deficiencies at three triage levels showed 7116 minor errors, 679 major errors, and 71 plan rejections. The plan rejection level is the highest chart deficiency, which required the plan to be rejected and sent back for serious remediation and/or new plan generation. Conclusion This report describes the successful development and implementation of a hybrid‐automated chart checking program. The software leverages modern database and software design to improve the per case performance and experience of a multi‐user group. Chart check database permits high‐level review and improvement in all aspects of plan check and user performance.