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8 citation(s) found for "Asadimanesh, Naghmeh".

Empirical Mode Decomposition-Based Deep Learning Model Development for Medical Imaging: Feasibility Study for Gastrointestinal Endoscopic Image Classification
Deb, Mou, Dhar, Mrinal Kanti , Elangovan, Poonguzhali , Gopalakrishnan, Keerthy, Sood, Divyanshi, Sethi, Aaftab, Afroze, Sabah , Bansal, Sourav , Goudel, Aastha , Parikh, Charmy, Kaur, Avneet , Rapolu, Swetha, Panjwani, Gianeshwaree Alias Rachna , ANSARI, RABIAH ASLAM, Asadimanesh, Naghmeh, Karuppiah, Shiva Sankari, Helgeson, Scott A. , Arunachalam, Shivaram P. , Elangovan, Poonguzhali , Arunachalam, S P , Helgeson, Scott A , Panjwani, Gianeshwaree Alias Rachna , SETHI, AAFTAB, Asadimanesh, Naghmeh , Akshintala, Venkata S.

Mayo Clinic

Journal of Imaging | December 22, 2025 | Volume: 12 | Issue: 1 | Pages: 4

10.3390/jimaging12010004 | PMID 41590889 Get It

This study proposes a novel two-dimensional Empirical Mode Decomposition (2D EMD)-based deep learning framework to enhance model performance in multi-class image classification tasks and potential early detection of diseases in healthcare using medical imaging. To validate this approach, we apply it to gastrointestinal (GI) endoscopic image classification using the publicly available Kvasir dataset, which contains eight GI image classes with 1000 images each. The proposed 2D EMD-based design procedure decomposes images into a full set of intrinsic mode functions (IMFs) to enhance image features beneficial for AI model development. Integrating 2D EMD into a deep learning pipeline, we evaluate its impact on four popular models (ResNet152, VGG19bn, MobileNetV3L, and SwinTransformerV2S). The results demonstrate that subtracting IMFs from the original image consistently improves accuracy, F1-score, and AUC for all models. The study reveals a notable enhancement in model performance, with an approximately 9% increase in accuracy compared to counterparts without EMD integration for ResNet152. Similarly, there is an increase of around 18% for VGG19L, 3% for MobileNetV3L, and 8% for SwinTransformerV2. Additionally, explainable AI (XAI) techniques, such as Grad-CAM, illustrate that the model focuses on GI regions for predictions. This study highlights the efficacy of 2D EMD in enhancing deep learning model performance for GI image classification, with potential applications in other domains.
A Novel Unsupervised You Only Listen Once (YOLO) Machine Learning Platform for Automatic Detection and Characterization of Prominent Bowel Sounds Towards Precision Medicine
Yerrapragada, Gayathri, Lee, Jieun , Shariff, Mohammed Naveed , Elangovan, Poonguzhali , Gopalakrishnan, Keerthy, Kaur, Avneet , Sood, Divyanshi, Rapolu, Swetha, Gohri, Jay , Panjwani, Gianeshwaree Alias Rachna , Ansari, Rabiah Aslam, Mikkilineni, Jahnavi, Asadimanesh, Naghmeh, Natarajan, T.K. , Janarthanan, Jayarajasekaran, Karuppiah, Shiva Sankari, Iyer, Vivek , Helgeson, Scott A. , Arunachalam, Shivaram P. , Shariff, Mohammad Naveed , Natarajan, Thangeswaran , Iyer, Vivek N , Arunachalam, S P , Elangovan, Poonguzhali , Helgeson, Scott A , Panjwani, Gianeshwaree Alias Rachna , Yerrapragada, Gayathri, Ansari, Rabiah Aslam, Akshintala, Venkata S.

Mayo Clinic

Bioengineering | November 19, 2025 | Volume: 12 | Issue: 11 | Pages: 1271

10.3390/bioengineering12111271 | PMID 41301229 Get It

Phonoenterography (PEG) offers a non-invasive and radiation-free technique to assess gastrointestinal activity through acoustic signal analysis. In this feasibility study, 110 high-resolution PEG recordings (44.1 kHz, 16-bit) were acquired from eight healthy individuals, yielding 6314 prominent bowel sound (PBS) segments through automated segmentation. Each event was characterized using a 279-feature acoustic profile comprising Mel-frequency cepstral coefficients (MFCCs), their first-order derivatives (Δ-MFCCs), and six global spectral parameters. After normalization and dimensionality reduction with PCA and UMAP (cosine distance, 35 neighbors, minimum distance = 0.01), five clustering strategies were evaluated. K-Means (k = 5) achieved the most favorable balance between cluster quality (silhouette = 0.60; Calinski–Harabasz = 19,165; Davies–Bouldin = 0.68) and interpretability, consistently identifying five acoustic patterns: single-burst, multiple-burst, harmonic, random-continuous, and multi-modal. Temporal modeling of clustered events further revealed distinct sequential dynamics, with Single-Burst events showing the longest dwell times, random continuous the shortest, and strong diagonal elements in the transition matrix confirming measurable state persistence. Frequent transitions between random continuous and multi-modal states suggested dynamic exchanges between transient and overlapping motility patterns. Together, these findings demonstrate that unsupervised PEG-based analysis can capture both acoustic variability and temporal organization of bowel sounds. This annotation-free approach provides a scalable framework for real-time gastrointestinal monitoring and holds potential for clinical translation in conditions such as postoperative ileus, bowel obstruction, irritable bowel syndrome, and inflammatory bowel disease.
Prospects of AI-Powered Bowel Sound Analytics for Diagnosis, Characterization, and Treatment Management of Inflammatory Bowel Disease
Sood, Divyanshi, RIAZ, ZENAB MUHAMMAD, Mikkilineni, Jahnavi, Ravi, Narendra Nath, Chidipothu, Vineeta, Yerrapragada, Gayathri, Poonguzhali, E. , Shariff, Mohammed Naveed , Natarajan, T.K. , Janarthanan, Jayarajasekaran, Asadimanesh, Naghmeh , Karuppiah, Shiva Sankari, Gopalakrishnan, Keerthy, Arunachalam, Shivaram P. , Natarajan, Thangeswaran , Arunachalam, S P , Shariff, Mohammad Naveed

Mayo Clinic

Medical Sciences | October 14, 2025 | Volume: 13 | Issue: 4 | Pages: 230

10.3390/medsci13040230 | PMID 41133513 Get It

Background: This narrative review examines the role of artificial intelligence (AI) in bowel sound analysis for the diagnosis and management of inflammatory bowel disease (IBD). Inflammatory bowel disease (IBD), encompassing Crohn’s disease and ulcerative colitis, presents a significant clinical burden due to its unpredictable course, variable symptomatology, and reliance on invasive procedures for diagnosis and disease monitoring. Despite advances in imaging and biomarkers, tools such as colonoscopy and fecal calprotectin remain costly, uncomfortable, and impractical for frequent or real-time assessment. Meanwhile, bowel sounds—an overlooked physiologic signal—reflect underlying gastrointestinal motility and inflammation but have historically lacked objective quantification. With recent advances in artificial intelligence (AI) and acoustic signal processing, there is growing interest in leveraging bowel sound analysis as a novel, non-invasive biomarker for detecting IBD, monitoring disease activity, and predicting disease flares. This approach holds the promise of continuous, low-cost, and patient-friendly monitoring, which could transform IBD management. Objectives: This narrative review assesses the clinical utility, methodological rigor, and potential future integration of artificial intelligence (AI)-driven bowel sound analysis in inflammatory bowel disease (IBD), with a focus on its potential as a non-invasive biomarker for disease activity, flare prediction, and differential diagnosis. Methods: This manuscript reviews the potential of AI-powered bowel sound analysis as a non-invasive tool for diagnosing, monitoring, and managing inflammatory bowel disease (IBD), including Crohn’s disease and ulcerative colitis. Traditional diagnostic methods, such as colonoscopy and biomarkers, are often invasive, costly, and impractical for real-time monitoring. The manuscript explores bowel sounds, which reflect gastrointestinal motility and inflammation, as an alternative biomarker by utilizing AI techniques like convolutional neural networks (CNNs), transformers, and gradient boosting. We analyze data on acoustic signal acquisition (e.g., smart T-shirts, smartphones), signal processing methodologies (e.g., MFCCs, spectrograms, empirical mode decomposition), and validation metrics (e.g., accuracy, F1 scores, AUC). Studies were assessed for clinical relevance, methodological rigor, and translational potential. Results: Across studies enrolling 16–100 participants, AI models achieved diagnostic accuracies of 88–96%, with AUCs ≥ 0.83 and F1 scores ranging from 0.71 to 0.85 for differentiating IBD from healthy controls and IBS. Transformer-based approaches (e.g., HuBERT, Wav2Vec 2.0) consistently outperformed CNNs and tabular models, yielding F1 scores of 80–85%, while gradient boosting on wearable multi-microphone recordings demonstrated robustness to background noise. Distinct acoustic signatures were identified, including prolonged sound-to-sound intervals in Crohn’s disease (mean 1232 ms vs. 511 ms in IBS) and high-pitched tinkling in stricturing phenotypes. Despite promising performance, current models remain below established biomarkers such as fecal calprotectin (~90% sensitivity for active disease), and generalizability is limited by small, heterogeneous cohorts and the absence of prospective validation. Conclusions: AI-powered bowel sound analysis represents a promising, non-invasive tool for IBD monitoring. However, widespread clinical integration requires standardized data acquisition protocols, large multi-center datasets with clinical correlates, explainable AI frameworks, and ethical data governance. Future directions include wearable-enabled remote monitoring platforms and multi-modal decision support systems integrating bowel sounds with biomarker and symptom data. This manuscript emphasizes the need for large-scale, multi-center studies, the development of explainable AI frameworks, and the integration of these tools within clinical workflows. Future directions include remote monitoring using wearables and multi-modal systems that combine bowel sounds with biomarkers and patient symptoms, aiming to transform IBD care into a more personalized and proactive model.
Artificial Intelligence-Guided Neuromodulation in Heart Failure with Preserved and Reduced Ejection Fraction: Mechanisms, Evidence, and Future Directions
Ansari, Rabiah Aslam, Senapati, Sidhartha Gautam , Ahluwalia, Vibhor, Panjwani, Gianeshwaree Alias Rachna , Kaur, Anmolpreet , Yerrapragada, Gayathri, Kala, Jayavinamika Jayapradhaban, Poonguzhali, E. , Karuppiah, Shiva Sankari, Asadimanesh, Naghmeh, Muthyala, Anjani, Arunachalam, Shivaram P. , Kaur, Anmolpreet , Jayapradhaban Kala, Jayavinamika, Arunachalam, S P , Panjwani, Gianeshwaree Alias Rachna , Ansari, Rabiah Aslam

Mayo Clinic

Journal of Cardiovascular Development and Disease | August 19, 2025 | Volume: 12 | Issue: 8 | Pages: 314

10.3390/jcdd12080314 | PMID 40863380 Get It

Heart failure, a significant global health burden, is divided into heart failure with reduced ejection fraction (HFrEF) and preserved ejection fraction (HFpEF), characterized by systolic dysfunction and diastolic stiffness, respectively. While HFrEF benefits from pharmacological and device-based therapies, HFpEF lacks effective treatments, with both conditions leading to high rehospitalization rates and reduced quality of life, especially in older adults with comorbidities. This review explores the role of artificial intelligence (AI) in advancing autonomic neuromodulation for heart failure management. AI enhances patient selection, optimizes stimulation strategies, and enables adaptive, closed-loop systems. In HFrEF, vagus nerve stimulation and baroreflex activation therapy improve functional status and biomarkers, while AI-driven models adjust stimulation dynamically based on physiological feedback. In HFpEF, AI aids in deep phenotyping to identify responsive subgroups for neuromodulatory interventions. Clinical tools support remote monitoring, risk assessment, and symptom detection. However, challenges like data integration, ethical oversight, and clinical adoption limit real-world application. Algorithm transparency, bias minimization, and equitable access are critical for success. Interdisciplinary collaboration and ethical innovation are essential to develop personalized, data-driven, patient-centered heart failure treatment strategies through AI-guided neuromodulation.
Metrics for Phonoenterogram Analytics Towards AI Powered Diagnosis of Bowel Diseases: Feasibility Meal Study in a Healthy Subject
Gopalakrishnan, Keerthy, Asadimanesh, Naghmeh, Sood, Divyanshi, Rapolu, Swetha, Lee, Jieun , Patel, Bhumi, Arunachalam, S P , Mohan, Anmol , Patel, Bhumi, Dilmaghani, Saam , Arunachalam, Shivaram P.

Mayo Clinic

2025 IEEE International Conference on Electro Information Technology (eIT) | August 12, 2025 | Volume: No volume available | Issue: No issue available | Pages: 1-6

10.1109/eit64391.2025.11103636 Get It

A Novel You Only Listen Once (YOLO) Deep Learning Model for Automatic Prominent Bowel Sounds Detection: Feasibility Study in Healthy Subjects
Kalahasty, Rohan, Yerrapragada, Gayathri, Lee, Jieun , Gopalakrishnan, Keerthy, Kaur, Avneet , Muddaloor, Pratyusha, Sood, Divyanshi, Parikh, Charmy, Gohri, Jay , Panjwani, Gianeshwaree Alias Rachna , Asadimanesh, Naghmeh, Ansari, Rabiah Aslam, Rapolu, Swetha, Karuppiah, Shiva Sankari, Dasari, Vijaya M., Helgeson, Scott A. , Arunachalam, Shivaram P. , Helgeson, Scott A , Arunachalam, S P , Panjwani, Gianeshwaree Alias Rachna , Yerrapragada, Gayathri, Ansari, Rabiah Aslam, Elangovan, Poonguzhali , Akshintala, Venkata S.

Mayo Clinic

Sensors | August 4, 2025 | Volume: 25 | Issue: 15 | Pages: 4735

10.3390/s25154735 | PMID 40807899 Get It

Accurate diagnosis of gastrointestinal (GI) diseases typically requires invasive procedures or imaging studies that pose the risk of various post-procedural complications or involve radiation exposure. Bowel sounds (BSs), though typically described during a GI-focused physical exam, are highly inaccurate and variable, with low clinical value in diagnosis. Interpretation of the acoustic characteristics of BSs, i.e., using a phonoenterogram (PEG), may aid in diagnosing various GI conditions non-invasively. Use of artificial intelligence (AI) and improvements in computational analysis can enhance the use of PEGs in different GI diseases and lead to a non-invasive, cost-effective diagnostic modality that has not been explored before. The purpose of this work was to develop an automated AI model, You Only Listen Once (YOLO), to detect prominent bowel sounds that can enable real-time analysis for future GI disease detection and diagnosis. A total of 110 2-minute PEGs sampled at 44.1 kHz were recorded using the Eko DUO® stethoscope from eight healthy volunteers at two locations, namely, left upper quadrant (LUQ) and right lower quadrant (RLQ) after IRB approval. The datasets were annotated by trained physicians, categorizing BSs as prominent or obscure using version 1.7 of Label Studio Software®. Each BS recording was split up into 375 ms segments with 200 ms overlap for real-time BS detection. Each segment was binned based on whether it contained a prominent BS, resulting in a dataset of 36,149 non-prominent segments and 6435 prominent segments. Our dataset was divided into training, validation, and test sets (60/20/20% split). A 1D-CNN augmented transformer was trained to classify these segments via the input of Mel-frequency cepstral coefficients. The developed AI model achieved area under the receiver operating curve (ROC) of 0.92, accuracy of 86.6%, precision of 86.85%, and recall of 86.08%. This shows that the 1D-CNN augmented transformer with Mel-frequency cepstral coefficients achieved creditable performance metrics, signifying the YOLO model’s capability to classify prominent bowel sounds that can be further analyzed for various GI diseases. This proof-of-concept study in healthy volunteers demonstrates that automated BS detection can pave the way for developing more intuitive and efficient AI-PEG devices that can be trained and utilized to diagnose various GI conditions. To ensure the robustness and generalizability of these findings, further investigations encompassing a broader cohort, inclusive of both healthy and disease states are needed.
A Novel 3D Convolutional Neural Network-Based Deep Learning Model for Spatiotemporal Feature Mapping for Video Analysis: Feasibility Study for Gastrointestinal Endoscopic Video Classification
Dhar, Mrinal Kanti , Deb, Mou, Gopalakrishnan, Keerthy, Sood, Divyanshi, Kaur, Avneet , Parikh, Charmy, Rapolu, Swetha, Panjwani, Gianeshwaree Alias Rachna , Ansari, Rabiah Aslam, Asadimanesh, Naghmeh, Karuppiah, Shiva Sankari, Helgeson, Scott A. , Arunachalam, Shivaram P. , Panjwani, Gianeshwaree Alias Rachna , Helgeson, Scott A , Arunachalam, S P , Elangovan, Poonguzhali , Ansari, Rabiah Aslam, Akshintala, Venkata S.

Mayo Clinic

Journal of Imaging | July 18, 2025 | Volume: 11 | Issue: 7 | Pages: 243

10.3390/jimaging11070243 | PMID 40710629 Get It

Accurate analysis of medical videos remains a major challenge in deep learning (DL) due to the need for effective spatiotemporal feature mapping that captures both spatial detail and temporal dynamics. Despite advances in DL, most existing models in medical AI focus on static images, overlooking critical temporal cues present in video data. To bridge this gap, a novel DL-based framework is proposed for spatiotemporal feature extraction from medical video sequences. As a feasibility use case, this study focuses on gastrointestinal (GI) endoscopic video classification. A 3D convolutional neural network (CNN) is developed to classify upper and lower GI endoscopic videos using the hyperKvasir dataset, which contains 314 lower and 60 upper GI videos. To address data imbalance, 60 matched pairs of videos are randomly selected across 20 experimental runs. Videos are resized to 224 × 224, and the 3D CNN captures spatiotemporal information. A 3D version of the parallel spatial and channel squeeze-and-excitation (P-scSE) is implemented, and a new block called the residual with parallel attention (RPA) block is proposed by combining P-scSE3D with a residual block. To reduce computational complexity, a (2 + 1)D convolution is used in place of full 3D convolution. The model achieves an average accuracy of 0.933, precision of 0.932, recall of 0.944, F1-score of 0.935, and AUC of 0.933. It is also observed that the integration of P-scSE3D increased the F1-score by 7%. This preliminary work opens avenues for exploring various GI endoscopic video-based prospective studies.
From Data to Decisions: AI in Varicose Veins—Predicting, Diagnosing, and Guiding Effective Management
Pugalenthi, Lakshmi Sree , Garapati, Chris Alex Wesley, Maddukuri, Srivarshini , Kanwal, Fnu, Kumar, J. P. Senthil, Asadimanesh, Naghmeh, Dadwal, Surbhi, Ahluwalia, Vibhor, Senapati, Sidhartha Gautam , Arunachalam, Shivaram P. , Arunachalam, S P , Kumar, Jaspreet, Dadwal, Surbhi

Mayo Clinic

Journal of Vascular Diseases | May 14, 2025 | Volume: 4 | Issue: 2 | Pages: 19

10.3390/jvd4020019 Get It

Background: Varicose veins (VVs) of the lower limbs, characterized by palpable, dilated, and tortuous veins, affect 2–73% of the global population. Artificial intelligence (AI) offers significant potential to enhance healthcare efficiency and decision-making, particularly in managing VVs through improved risk factor identification, diagnosis, and treatment planning. Objective: This abstract explores the role of AI in VV management, focusing on its applications in risk detection, image analysis, treatment planning, and surgical interventions, while addressing challenges to its widespread adoption. Methods: AI leverages advanced techniques such as computer vision and deep learning to analyze patient data, including medical history, symptoms, physical examinations, and imaging (e.g., ultrasounds, venography). It identifies patterns in large datasets to support personalized treatment plans, early risk detection, and disease severity assessment. Results: AI demonstrates promise in automating VV detection and classification, assessing disease severity, and aiding treatment planning. It enhances surgical interventions through preoperative planning, intraoperative navigation, and recurrence risk prediction. However, its adoption is limited by a lack of large-scale studies, concerns over accuracy, and the need for regulatory and ethical oversight. Conclusion: AI has the potential to revolutionize VV management by improving diagnosis, treatment precision, and patient outcomes. Further research, validation, and integration are critical to overcoming current limitations and fully realizing AI’s capabilities in clinical practice.