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951 citation(s) found for "Zhu, Zhu".

Cereblon expression is required for the antimyeloma activity of lenalidomide and pomalidomide
Zhu, Yuan Xiao , Braggio, Esteban , Shi, Chang-Xin, Bruins, Laura A., Schmidt, Jessica, Wier, Scott Van, Chang, Xiu-Bao, Bjorklund, Chad C. , Fonseca, Rafaël , Bergsagel, P. Leif , Orlowski, Robert Z. , Stewart, A. Keith, Orlowski, Robert Z. , Bergsagel, P. Leif , Braggio, Esteban , Fonseca, Rafael

Mayo Clinic

Blood | August 23, 2011 | Volume: 118 | Issue: 18 | Pages: 4771-4779

10.1182/blood-2011-05-356063 | PMID 21860026 Get It

Abstract The precise molecular mechanism of action and targets through which thalidomide and related immunomodulatory drugs (IMiDs) exert their antitumor effects remains unclear. We investigated the role of cereblon (CRBN), a primary teratogenic target of thalidomide, in the antimyeloma activity of IMiDs. CRBN depletion is initially cytotoxic to human myeloma cells, but surviving cells with stable CRBN depletion become highly resistant to both lenalidomide and pomalidomide, but not to the unrelated drugs bortezomib, dexamethasone, and melphalan. Acquired deletion of CRBN was found to be the primary genetic event differentiating isogenic MM1.S cell lines cultured to be sensitive or resistant to lenalidomide and pomalidomide. Gene expression changes induced by lenalidomide were dramatically suppressed in the presence of CRBN depletion, further demonstrating that CRBN is required for lenalidomide activity. Downstream targets of CRBN include interferon regulatory factor 4 (IRF4) previously reported to also be a target of lenalidomide. Patients exposed to, and putatively resistant to, lenalidomide had lower CRBN levels in paired samples before and after therapy. In summary, CRBN is an essential requirement for IMiD activity and a possible biomarker for the clinical assessment of antimyeloma efficacy.
Simultaneous Phenotyping and Quantification of α-1-Antitrypsin by Liquid Chromatography–Tandem Mass Spectrometry
Snyder, Melissa R, Zhu, Yi , Tostrud, Linda J., Benson, Linda M., Katzmann, Jerry A., Bergen, H. Robert, Chen, Yuhong , Snyder, Melissa R, Zhu, Yi

Mayo Clinic

Clinical Chemistry | June 3, 2011 | Volume: 57 | Issue: 8 | Pages: 1161-1168

10.1373/clinchem.2011.163006 | PMID 21636698 Get It

BACKGROUNDα-1-Antitrypsin (A1AT) deficiency results from a genetic disorder at 2 common loci. Diagnosis requires quantification of A1AT and subsequent identification of the specific variant. The current algorithm of laboratory testing for the diagnosis of A1AT deficiency uses a combination of quantification (nephelometry), genotyping, and/or phenotyping. We developed a multiple reaction monitoring liquid chromatography–tandem mass spectrometry (LC-MS/MS) method for simultaneous quantification of A1AT and identification of the 2 most common deficiency alleles present in 95% of the patients with A1AT deficiency.METHODSSerum samples (n = 40) were digested with trypsin, and appropriate 13C/15N-labeled standard peptides were added. We performed LC-MS/MS analysis with a 0.5- by 150-mm C18 column and H2O:acetonitrile:n-propanol:formic acid (A:98:1:1:0.2 and B:10:80:10:0.2; flow 12 μL/min) mobile phase in positive ion mode on a TSQ Quantum triple quadrupole MS system. We measured the A1AT concentration by comparison to a calibration curve and determined the phenotype by the presence or absence of variant peptides. We compared the results to the current phenotyping assay by isoelectric focusing (IEF) and the immunonephelometry quantitative assay.RESULTSFor A1AT allele detection, in 39 of 40 samples the LC-MS/MS results were identical to those obtained by IEF gel electrophoresis. The single discrepant result was rerun by IEF at a lower dilution, and the results were in concordance. The A1AT quantification by LC-MS/MS also compared favorably with nephelometry.CONCLUSIONSThe LC-MS/MS method correlates well with current phenotyping and nephelometric assays and has the potential to improve the laboratory diagnosis of genetic A1AT deficiency.
The Selaginella Genome Identifies Genetic Changes Associated with the Evolution of Vascular Plants
Banks, Jo Ann , Nishiyama, Tomoaki , Hasebe, Mitsuyasu , Bowman, John L. , Gribskov, Michael , dePamphilis, Claude W. , Albert, Victor A. , Aono, Naoki, Aoyama, Tsuyoshi , Ambrose, Barbara A. , Ashton, Neil W., Axtell, Michael J. , Barker, Elizabeth I. , Bonawitz, Nicholas D. , Chapple, Clint , Cheng, Chaoyang , Corrêa, Luiz Gustavo Guedes, Dacre, Michael , DeBarry, Jeremy D. , Drèyer, Ingo , Engstrom, Eric M., Estelle, Mark , Feng, Liang , Finet, Cédric , Floyd, Sandra K., Gramzow, Lydia , Harholt, Jesper , Hattori, Mitsuru , Heyl, Alexander , Hirai, Tadayoshi , Hiwatashi, Yuji , Ishikawa, Masaki , Iwata, Mineko, Karol, Kenneth G. , Koehler, Barbara, Kolukisaoglu, Uener, Kubo, Minoru , Kurata, Tetsuya , Lalonde, Sylvie, Li, Kejie , Litt, Amy , Manning, Gerard , Michael, Todd P. , Miyazaki, Saori , Morinaga, Shin‐Ichi, Murata, Takashi, Nelson, David R. , Obara, Mari, Oguri, Yasuko, Olmstead, Richard G. , Onodera, Naoko T., Petersen, Bent Larsen , Pils, Birgit, Prigge, Michael J. , Riaño‐Pachón, Diego Mauricio , Scheller, Henrik Vibe , Schulz, Burkhard , Schulz, Christian , Shakirov, Eugene V. , Shibagaki, Nakako, Shippen, Dorothy E. , Sørensen, Iben , Sotooka, Ryo, Sugimoto, Nagisa , Sugita, Mamoru , Sumikawa, Naomi, Tanurdžić, Miloš , Theißen, Günter, Ulvskov, Peter , Wakazuki, Sachiko, Weng, Jing‐Ke , Willats, William G. T. , Wipf, Daniel , Wolf, Paul G. , Yang, Lixing , Zimmer, Andreas , Zhu, Qihui , Mitros, Therese , Hellsten, Uffe, Loqué, Dominique , Otillar, Robert, Salamov, Asaf, Shapiro, Harris , Lindquist, Erika , Lucas, Susan , Rokhsar, Daniel S. , Grigoriev, Igor V. , Ashton, Neil W., Barker, Michael S. , Bennetzen, Jeffrey L. , Eliáš, Marek , Frommer, Wolf Bernd , Fujita, Tomomichi , Gutensohn, Michael , Li, Ying , Lyons, Eric H. , Maruyama, Takeshi , Mikami, Koji , Murata, Takashi , Mueller‐Roeber, Bernd , Oguri, Yasuko, Rensing, Stefan Andreas , Roberts, Alison W. , Sato, Yoshikatsu , Shinohara, Naoki , Schmutz, Jeremy

Mayo Clinic

Science | May 5, 2011 | Volume: 332 | Issue: 6032 | Pages: 960-963

10.1126/science.1203810 | PMID 21551031 Get It

The genome sequence of a lycophyte hints at ancient evolutionary transitions.
Persistent kidney dysfunction in swine renal artery stenosis correlates with outer cortical microvascular remodeling
Eirin, Alfonso , Zhu, Xiang-Yang, Urbieta-Caceres, Victor H., Grande, Joseph P. , Textor, Stephen C., Lerman, Lilach O. , Lerman, Amir , Eirin, Alfonso

Mayo Clinic

American Journal of Physiology-Renal Physiology | March 3, 2011 | Volume: 300 | Issue: 6 | Pages: F1394-F1401

10.1152/ajprenal.00697.2010 | PMID 21367913 Get It

Percutaneous transluminal renal stenting (PTRS) does not consistently improve renal function in patients with atherosclerotic renovascular disease, but the mechanisms underlying irreversible kidney injury have not been fully elucidated. We hypothesized that renal dysfunction after PTRS is linked to ongoing renal microvascular (MV) remodeling. Pigs were studied after 10 wk of atherosclerosis and renal artery stenosis (ARAS), ARAS treated with PTRS 4 wk earlier, and normal controls ( n = 10 each). Renal blood flow (RBF) and glomerular filtration rate (GFR) were studied using multidetector computer tomography. Renal microvascular architecture (micro-CT), angiogenic activity, oxidative stress, and fibrosis were evaluated ex vivo. Four weeks after PTRS, blood pressure was normalized. However, GFR and RBF remained similarly decreased in untreated ARAS and ARAS+PTRS ( P < 0.05 vs. normal). MV rarefaction was unaltered after revascularization, and the spatial density of outer cortical microvessels correlated with residual GFR. Interstitial fibrosis and altered expression of proangiogenic and profibrotic factors persisted after PTRS. Tubulointerstitial injury in ARAS persisted 4 wk after mechanically successful PTRS, and vessel loss correlated with residual renal dysfunction. MV loss and fibrosis in swine ARAS might account for persistent renal dysfunction after PTRS and underscore the need to assess renal parenchymal disease before revascularization.
RNAi screen of the druggable genome identifies modulators of proteasome inhibitor sensitivity in myeloma including CDK5
Zhu, Yuan Xiao , Tiedemann, Rodger E. , Shi, Chang-Xin, Yin, Holly, Schmidt, Jessica, Bruins, Laura A., Keats, Jonathan J. , Braggio, Esteban , Sereduk, Chris , Mousses, Spyro, Stewart, A. Keith, Braggio, Esteban , Keats, Jonathan J

Mayo Clinic

Blood | February 3, 2011 | Volume: 117 | Issue: 14 | Pages: 3847-3857

10.1182/blood-2010-08-304022 | PMID 21289309 Get It

Abstract The molecular target(s) cooperating with proteasome inhibition in multiple myeloma (MM) remain unknown. We therefore measured proliferation in MM cells transfected with 13 984 small interfering RNAs in the absence or presence of increasing concentrations of bortezomib. We identified 37 genes, which when silenced, are not directly cytotoxic but do synergistically potentiate the growth inhibitory effects of bortezomib. To focus on bortezomib sensitizers, genes that also sensitized MM to melphalan were excluded. When suppressed, the strongest bortezomib sensitizers were the proteasome subunits PSMA5, PSMB2, PSMB3, and PSMB7 providing internal validation, but others included BAZ1B, CDK5, CDC42SE2, MDM4, NME7, RAB8B, TFE3, TNFAIP3, TNK1, TOP1, VAMP2, and YY1. The strongest hit CDK5 also featured prominently in pathway analysis of primary screen data. Cyclin-dependent kinase 5 (CDK5) is expressed at high levels in MM and neural tissues with relatively low expression in other organs. Viral shRNA knockdown of CDK5 consistently sensitized 5 genetically variable MM cell lines to proteasome inhibitors (bortezomib and carfilzomib). Small-molecule CDK5 inhibitors were demonstrated to synergize with bortezomib to induce cytotoxicity of primary myeloma cells and myeloma cell lines. CDK5 regulation of proteasome subunit PSMB5 was identified as a probable route to sensitization.
Early experimental hypertension preserves the myocardial microvasculature but aggravates cardiac injury distal to chronic coronary artery obstruction
Caceres, Victor Hugo Urbieta, Lin, Jing , Zhu, Xiang-Yang, Gibson, Matthew E., Crane, John A., Lerman, Lilach O. , Favreau, Frederic D. , Lerman, Amir

Mayo Clinic

American Journal of Physiology-Heart and Circulatory Physiology | December 4, 2010 | Volume: 300 | Issue: 2 | Pages: H693-H701

10.1152/ajpheart.00516.2010 | PMID 21131477 Get It

Coronary artery disease is a leading cause of death. Hypertension (HT) increases the incidence of cardiac events, but its effect on cardiac adaptation to coexisting coronary artery stenosis (CAS) is unclear. We hypothesized that concurrent HT modulates microvascular function in chronic CAS and aggravates microvascular remodeling and myocardial injury. Four groups of pigs ( n = 6 each) were studied: normal, CAS, HT, and CAS+HT. CAS and HT were induced by placing local irritant coils in the left circumflex coronary artery and renal artery, respectively. Six weeks later multidetector computerized tomography (CT) was used to assess systolic and diastolic function, microvascular permeability, myocardial perfusion, and responses to adenosine in the “area at risk.” Microvascular architecture, inflammation, and fibrosis were then explored in cardiac tissue. Basal myocardial perfusion was similarly decreased in CAS and CAS+HT, but its response to adenosine was significantly more attenuated in CAS. Microvascular permeability in CAS+HT was greater than in CAS and was accompanied by amplified myocardial inflammation, fibrosis, and microvascular remodeling, as well as cardiac systolic and diastolic dysfunction. On the other hand, compared with normal, micro-CT-derived microvascular (20–200 μm) transmural density decreased in CAS but not in HT or CAS+HT. We conclude that the coexistence of early renovascular HT exacerbated myocardial fibrosis and vascular remodeling distal to CAS. These changes were not mediated by loss of myocardial microvessels, which were relatively preserved, but possibly by exacerbated myocardial inflammation and fibrosis. HT modulates cardiac adaptive responses to CAS and bears cardiac functional consequences.
Dissemination of an Enterococcus Inc18-Like vanA Plasmid Associated with Vancomycin-Resistant Staphylococcus aureus
Zhu, Wenming , Murray, Patrick R. , Huskins, W. Charles , Jernigan, John A. , McDonald, Lawrence C., Clark, Nancye C., Anderson, Karen, McDougal, Linda K., Hageman, Jeff, Olsen-Rasmussen, Melissa, Frace, Mike, Alangaden, George , Zervos, Marcus , Robinson-Dunn, Barbara, Schreckenberger, Paul C., Reller, L. Barth, Rudrik, James T., Patel, Jean B. , McDonald, Lawrence C., Chenoweth, Carol , Huskins, W Charles

Mayo Clinic

Antimicrobial Agents and Chemotherapy | July 27, 2010 | Volume: 54 | Issue: 10 | Pages: 4314-4320

10.1128/aac.00185-10 | PMID 20660665 Get It

ABSTRACT Of the 9 vancomycin-resistant Staphylococcus aureus (VRSA) cases reported to date in the literature, 7 occurred in Michigan. In 5 of the 7 Michigan VRSA cases, an Inc18-like vanA plasmid was identified in the VRSA isolate and/or an associated vancomycin-resistant Enterococcus (VRE) isolate from the same patient. This plasmid may play a critical role in the emergence of VRSA. We studied the geographical distribution of the plasmid by testing 1,641 VRE isolates from three separate collections by PCR for plasmid-specific genes traA , repR , and vanA . Isolates from one collection (phase 2) were recovered from surveillance cultures collected in 17 hospitals in 13 states. All VRE isolates from 2 Michigan institutions ( n = 386) and between 60 and 70 VRE isolates ( n = 883) from the other hospitals were tested. Fifteen VRE isolates (3.9%) from Michigan were positive for an Inc18-like vanA plasmid (9 E. faecalis [12.5%], 3 E. faecium [1.0%], 2 E. avium , and 1 E. raffinosus ). Six VRE isolates (0.6%) from outside Michigan were positive (3 E. faecalis [2.7%] and 3 E. faecium [0.4%]). Of all E. faecalis isolates tested, 6.0% were positive for the plasmid, compared to 0.6% for E. faecium and 3.0% for other spp. Fourteen of the 15 plasmid-positive isolates from Michigan had the same Tn 1546 insertion site location as the VRSA-associated Inc18-like plasmid, whereas 5 of 6 plasmid-positive isolates from outside Michigan differed in this characteristic. Most plasmid-positive E. faecalis isolates demonstrated diverse patterns by PFGE, with the exception of three pairs with indistinguishable patterns, suggesting that the plasmid is mobile in nature. Although VRE isolates with the VRSA-associated Inc18-like vanA plasmid were more common in Michigan, they remain rare. Periodic surveillance of VRE isolates for the plasmid may be useful in predicting the occurrence of VRSA.
Effects of Composite Formulation on Mechanical Properties of Biodegradable Poly(Propylene Fumarate)/Bone Fiber Scaffolds
Liu, Nathan , Yaszemski, Michael J. , Lu, Lichun , Zhu, Xun

Mayo Clinic

International Journal of Polymer Science | July 8, 2010 | Volume: 2010 | Issue: No issue available | Pages: 1-6

10.1155/2010/270273 | PMID 22034584 Get It

The objective of our paper was to determine the effects of composite formulation on the compressive modulus and ultimate strength of a biodegradable, in situ polymerizable poly(propylene fumarate) (PPF) and bone fiber scaffold. The following parameters were investigated: the incorporation of bone fibers (either mineralized or demineralized), PPF molecular weight, N-vinyl pyrrolidinone (NVP) crosslinker amount, benzoyl peroxide (BP) initiator amount, and sodium chloride porogen amount. Eight formulations were chosen based on a resolution III two-level fractional factorial design. The compressive modulus and ultimate strength of these formulations were measured on a materials testing machine. Absolute values for compressive modulus varied from 21.3 to 271 MPa and 2.8 to 358 MPa for dry and wet samples, respectively. The ultimate strength of the crosslinked composites varied from 2.1 to 20.3 MPa for dry samples and from 0.4 to 16.6 MPa for wet samples. Main effects of each parameter on the measured property were calculated. The incorporation of mineralized bone fibers and an increase in PPF molecular weight resulted in higher compressive modulus and ultimate strength. Both mechanical properties also increased as the amount of benzoyl peroxide increased or the NVP amount decreased in the formulation. Sodium chloride had a dominating effect on the increase of mechanical properties in dry samples but showed little effects in wet samples. Demineralization of bone fibers led to a decrease in the compressive modulus and ultimate strength. Our results suggest that bone fibers are appropriate as structural enforcement components in PPF scaffolds. The desired orthopaedic PPF scaffold might be obtained by changing a variety of composite formulation parameters.
Human Airway Eosinophils Respond to Chemoattractants with Greater Eosinophil-Derived Neurotoxin Release, Adherence to Fibronectin, and Activation of the Ras–ERK Pathway When Compared with Blood Eosinophils
Bates, Mary Ellen , Sedgwick, Julie B., Liu, Lin Ying, Heuser, Rose G., Jarjour, Nizar N. , Kita, Hirohito , Bertics, Paul J., Fahy, John V. , Zhu, Yiming , Kita, H

Mayo Clinic

The Journal of Immunology | May 21, 2010 | Volume: 184 | Issue: 12 | Pages: 7125-7133

10.4049/jimmunol.0900634 | PMID 20495064 Get It

Abstract Human blood eosinophils exposed ex vivo to hematopoietic cytokines (e.g., IL-5 or GM-CSF) subsequently display enhanced responsiveness to numerous chemoattractants, such as chemokines, platelet-activating factor, or FMLP, through a process known as priming. Airway eosinophils, obtained by bronchoalveolar lavage after segmental Ag challenge, also exhibit enhanced responsiveness to selected chemoattractants, suggesting that they are primed during cell trafficking from the blood to the airway. Earlier work has shown that chemoattractants stimulate greater activation of ERK1 and ERK2 following IL-5 priming in vitro, thus revealing that ERK1/ERK2 activity can be a molecular readout of priming under these circumstances. Because few studies have examined the intracellular mechanisms regulating priming as it relates to human airway eosinophils, we evaluated the responsiveness of blood and airway eosinophils to chemoattractants (FMLP, platelet-activating factor, CCL11, CCL5, CXCL8) with respect to degranulation, adherence to fibronectin, or Ras–ERK signaling cascade activation. When compared with blood eosinophils, airway eosinophils exhibited greater FMLP-stimulated eosinophil-derived neurotoxin release as well as augmented FMLP- and CCL11-stimulated adherence to fibronectin. In airway eosinophils, FMLP, CCL11, and CCL5 stimulated greater activation of Ras or ERK1/ERK2 when compared with baseline. Ras activation by FMLP in blood eosinophils was also enhanced following IL-5 priming. These studies are consistent with a model of in vivo priming of eosinophils by IL-5 or related cytokines following allergen challenge, and further demonstrate the key role of priming in the chemoattractant-stimulated responses of eosinophils. These data also demonstrate the importance of the Ras–ERK signaling pathway in the regulation of eosinophil responses to chemoattractants in the airway. Human airway eosinophils respond to several chemoattractants with increased activation of the Ras–ERK cascade, eosinophil-derived neurotoxin release, and adherence to fibronectin relative to blood eosinophils.
Early atherosclerosis aggravates the effect of renal artery stenosis on the swine kidney
Urbieta-Caceres, Victor H., Lavi, Ronit, Zhu, Xiang-Yang, Crane, John A., Textor, Stephen C., Lerman, Lilach O. , Lerman, Amir

Mayo Clinic

American Journal of Physiology-Renal Physiology | May 13, 2010 | Volume: 299 | Issue: 1 | Pages: F135-F140

10.1152/ajprenal.00159.2010 | PMID 20462971 Get It

Atherosclerotic renal artery stenosis (ARAS) is increasingly identified in patients with end-stage renal disease. Renal function in ARAS patients deteriorates more frequently than in nonatherosclerotic renal artery stenosis (RAS). This study was designed to test the hypothesis that atherosclerosis modifies the relationship between single-kidney hemodynamics and function and the severity of stenosis. The degree of unilateral RAS in domestic pigs (4 normal, 26 RAS, and 22 ARAS) was correlated with renal function and hemodynamics evaluated by 64-slice multidetector computerized tomography before and after endothelium-dependent challenge with ACh. The degree of stenosis and increase in mean arterial pressure were similar in RAS and ARAS. Stenotic single-kidney volume, blood flow, glomerular filtration rate, and cortical perfusion were lower than normal in both RAS and ARAS, but only in RAS correlated inversely with increasing degree of stenosis ( r = −0.62, r = −0.49, r = −0.51, and r = −0.46, respectively, P < 0.05 for all). Basal tubular fluid concentration capacity and stenotic cortical perfusion response to ACh were both blunted only in ARAS. This study shows that atherosclerosis modulates the impact of a stenosis in the renal artery on stenotic kidney hemodynamics, function, and tubular dynamics. These observations underscore the direct intrarenal effect of atherogenic factors on the kidneys.