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122 citation(s) found for "Chen, Jun".

Association of Breast Cancer Risk, Density, and Stiffness: Global Tissue Stiffness on Breast MR Elastography (MRE)
Patel, Bhavika , Pepin, Kay , Brandt, Kathy R., Pockaj, Barbara A. , Northfelt, Donald W. , Anderson, Karen R., Swanson, Kristin R. , Patel, Bhavika K , Swanson, Kristin R , Mazza, Gina L , Chen, Jun , Zhou, Yuxiang , Anderson, Karen, Kling, Juliana M. , Nikkhah, Mehdi , Ehman, Richard L.

Mayo Clinic

No container title available | June 15, 2021 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-611943/v1 Get It

Abstract Purpose:Quantify in vivo biomechanical tissue properties in various breast densities and in normal risk and high risk women using Magnetic Resonance Imaging (MRI)/MRE and examine the association between breast biomechanical properties and cancer risk.Methods: Patients with normal risk or high risk of breast cancer underent 3.0 T breast MR imaging and elastography. Breast parenchymal enhancement (BPE), density (from most recent mammogram), stiffness, elasticity, and viscosity were recorded. Within each breast density group (non-dense versus dense), stiffness, elasticity, and viscosity were compared across risk groups (normal versus high). A multivariable logistic regression model was used to evaluate whether the MRE parameters (separately for stiffness, elasticity, and viscosity) predicted risk status after controlling for clinical factors.Results: 50 normal risk and 86 high risk patients were included. Risk groups were similar on age, density, and menopausal status. Among patients with dense breasts, mean stiffness, elasticity, and viscosity were significantly higher in high risk patients (N = 55) compared to normal risk patients (N = 34; all p < 0.001). Stiffness remained a significant predictor of risk status (OR=4.26, 95% CI [1.96, 9.25]) even after controlling for breast density, BPE, age, and menopausal status. Similar results were seen for elasticity and viscosity.Conclusion: A structurally-based, quantitative biomarker of tissue stiffness obtained from MRE is associated with differences in breast cancer risk in dense breasts. Tissue stiffness could provide a novel prognostic marker to help identify high risk women with dense breasts who would benefit from increased surveillance and/or risk reduction measures.
Global tissue stiffness on breast MR elastography: High-risk dense breast patients have higher stiffness compared to average-risk dense breast patients.
Pepin, Kay , Brandt, Kathy R., Pockaj, Barbara A. , Northfelt, Donald W. , Anderson, Karen S. , Ahmad, Sarwat , Millstine, Denise , Apsey, Heidi A., Vachon, Celine M. , Nelson, Ilyse, Patel, Bhavika , Mazza, Gina L , Chen, Jun , Zhou, Yuxiang , Ernst, Brenda , Cronin, Patricia A. , Kling, Juliana M. , Vachon, Celine M. , Ehman, Richard L.

Mayo Clinic

Journal of Clinical Oncology | June 2, 2021 | Volume: 39 | Issue: 15_suppl | Pages: 10541-10541

10.1200/jco.2021.39.15_suppl.10541 Get It

10541 Background: Biomechanical tissue properties may vary in the breasts of patients at elevated risk for breast cancer. We aim to quantify in vivo biomechanical tissue properties in various breast densities and in both normal risk and high risk women using Magnetic Resonance Imaging (MRI)/MRE and examine the association of biomechanical properties of the breast with cancer risk. Methods: In this IRB–approved prospective single-institution study, we recruited two groups of women differing by breast cancer risk to undergo a 3.0 T dynamic contrast enhanced MRI/MRE of the breast. Low-average risk women were defined as having no personal or significant family history of breast cancer, no prior high risk breast biopsies and a negative mammography within 12 months. High-risk breast cancer patients were recruited from those patients who underwent standard of care breast MR. Within each breast density group (non-dense versus dense), two-sample t-tests were used to compare breast stiffness, elasticity, and viscosity across risk groups (low-average vs high). Results: There were 50 low-average risk and 86 high-risk patients recruited to the study. The risk groups were similar on age (mean age = 55.6 and 53.6 years), density (68% vs. 64% dense breasts) and menopausal status (66.0% vs. 69.8%). Among patients with dense breasts, mean stiffness, elasticity, and viscosity were significantly higher in high risk patients ( N = 55) compared to low-average risk patients ( N = 34; all p < 0.001). In the multivariate logistic regression model, breast stiffness remained a significant predictor of risk status (OR=4.26, 95% CI [1.96, 9.25]) even after controlling for breast density, MRI BPE, age, and menopausal status. Similar results were seen for breast elasticity (OR=4.88, 95% CI [2.08, 11.43]) and viscosity (OR=11.49, 95% CI [1.15, 114.89]). Conclusions: Structurally-based, quantitative biomarker of tissue stiffness obtained from global 3D breast MRE is associated with differences in breast cancer risk in dense breasts. As such, tissue stiffness could provide a novel prognostic marker to help identify the subset of high-risk women with dense breasts who would benefit from increased surveillance.[Table: see text]
Using MR elastography to assess portal hypertension and response to beta‐blockers in patients with cirrhosis
Danielsen, Karen Vagner , Hove, Jens Dahlgaard , Nabilou, Puria , Yin, Meng , Zhao, Mirabella , Teisner, Ane, Møller, Søren , Yin, Meng , Chen, Jun , Kallemose, Thomas , Siebner, Hartwig Roman , Ehman, Richard L. , Bendtsen, Flemming

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Liver International | June 1, 2021 | Volume: 41 | Issue: 9 | Pages: 2149-2158

10.1111/liv.14981 | PMID 34060714 Get It

Abstract Background MR elastography can determine organ‐related stiffness, which reflects the degree of fibrosis. Liver stiffness increases in cirrhosis, and stiffness increases further post‐prandially due to increased portal blood in‐flow. Non‐selective beta‐blockers (NSBB) reduce the portal venous inflow, but their effect on liver and spleen stiffness are disputed. Aims To assess whether MR elastography of the liver or spleen reflects the severity of cirrhosis, whether treatment with NSBB changes liver and spleen stiffness and whether changes in stiffness can predict the effect of NSBB on portal pressure. Methods Fifty‐two patients with cirrhosis underwent liver vein catheterization and two‐dimensional (2D) MR elastography on separate days. Thirty‐six of the patients had a hepatic venous pressure gradient (HVPG) of ≥12 mmHg and were tested prior to, and after, intravenous infusion of NSBB using HVPG measurement and MR elastography. Results HVPG showed a strong, positive, linear relationship with liver stiffness ( r 2 = 0.92; P < .001) and spleen stiffness ( r 2 = 0.94; P < .001). The cut‐off points for identifying patients with a HVPG ≥ 12 mmHg were 7.7 kPa for liver stiffness (sensitivity 0.78, specificity 0.64) and 10.5 kPa for spleen stiffness (sensitivity 0.8, specificity 0.79). Intravenous administration of NSBB significantly decreased spleen stiffness by 6.9% (CI: 3.5‐10.4, P < .001), but NSBB had no consistent effect on liver stiffness. However, changes in spleen stiffness were not related to the HVPG response ( P = .75). Conclusions Two‐dimensional MR elastographic estimation of liver or spleen stiffness reflects the degree of portal hypertension in patients with liver cirrhosis, but changes in stiffness after NSBB do not predict the effect on HVPG.
Soluble CD163 Identifies Those at Risk for Increased Hepatic Inflammation & Fibrosis
Sherman, Kenneth E. , Meeds, Heidi L. , Rouster, Susan D. , Abdel-hameed, Enass A. , Hernández, Jacqueline , Tamargo, Javier , Baum, Marianna K. , Baum, Marianna , Chen, Jun , Ehman, Richard L.

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Open Forum Infectious Diseases | April 22, 2021 | Volume: 8 | Issue: 6 | Pages: No page available

10.1093/ofid/ofab203 | PMID 34104667 Get It

Abstract Background Liver disease remains a significant cause of morbidity and mortality in HIV-infected persons. Soluble CD163 is a marker of Kupffer cell activation that is highly associated with development of hepatic fibrosis. The relative contributions of HIV-associated systemic immune activation vs other etiologies of injury are poorly characterized. Methods We utilized subjects in the Miami Adult Studies on HIV (MASH) cohort to evaluate 464 participants including 361 people with HIV (PWH) and 103 hepatitis C virus (HCV)/HIV-uninfected controls. Subjects underwent testing for hepatic fibrosis using both magnetic resonance elastography and the Enhanced Liver Fibrosis Index. Steatosis was evaluated by magnetic resonance imaging–derived proton density fat fraction. Immune activation markers and cytokines were quantitated using Luminex methodologies. Results Participants with HIV with or without HCV coinfection had higher levels of sCD163 than uninfected controls (P &lt; .05). Soluble sCD163 was highly associated with elevated alanine aminotransferase, a key marker of inflammation/injury and with hepatic fibrosis. Hepatic steatosis was also associated with a cytokine pattern suggestive of Kupffer cell activation but was not associated with an increase in sCD14 or sCD27. Conclusions Injury and resultant hepatic fibrosis occur by distinct though overlapping mechanistic pathways. In PWH, sCD163 is highly associated with both injury and fibrosis, suggesting that persistent systemic immune activation is a major contributor to long-term outcomes, adding to damage caused by alcohol, steatosis, and other hepatotoxic drug effects.
PNPLA3 Single Nucleotide Polymorphism Prevalence and Association with Liver Disease in a Diverse Cohort of Persons Living with HIV
Sherman, Kenneth E. , Rouster, Susan D. , Meeds, Heidi L. , Tamargo, Javier , Baum, Marianna K. , Baum, Marianna , Chen, Jun , Ehman, Richard L.

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Biology | March 21, 2021 | Volume: 10 | Issue: 3 | Pages: 242

10.3390/biology10030242 | PMID 33800964 Get It

In persons living with HIV (PLWH), there are multiple sources of liver injury. Gene polymorphisms of PNPLA3 (patatin-like phospholipase domain-containing protein 3) have been identified as an important cofactor for increased disease severity in both alcoholic and non-alcoholic steatohepatitis (NASH). We utilized a well-characterized cohort of ethnically and racially diverse patients with HIV to define the prevalence of PNPLA3 SNPs (single nucleotide polymorphism) (rs738409), and to determine the relationship to hepatic steatosis and liver fibrosis. Steatosis was determined using MRI-PDFF (magnetic resonance imaging-determined proton density fat fraction) and fibrosis was estimated using MR Elastography (MRE). From the Miami Area HIV Study (MASH) cohort, 100 HIV positive participants and 40 controls (HCV/HIV = 20; HCV and HIV negative = 20) were evaluated. Nearly 40% of all participants carried the variant G allele associated with increased liver disease severity and 5% were homozygotic GG. The variant SNP occurred most frequently in those self-identified as Hispanic compared to white or Black participants. Hepatic steatosis (>5% fat) was present significantly more often in those without HIV vs. those with (p < 0.001). Putative NAFLD/NASH was found to be present in 6% of tested subjects, who were HIV monoinfected. BMI was lower in those that carried the G allele for PNPLA3. This finding suggests that PNPLA3 may be an independent component to NAFLD (non-alcoholic fatty liver disease)/NASH development and longitudinal follow-up of the cohort is warranted.
Variant‐set association test for generalized linear mixed model
Zhan, Xiang , Banerjee, Kalins , Chen, Jun

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Genetic Epidemiology | February 20, 2021 | Volume: 45 | Issue: 4 | Pages: 402-412

10.1002/gepi.22378 | PMID 33604919 Get It

AbstractAdvances in high‐throughput biotechnologies have culminated in a wide range of omics (such as genomics, epigenomics, transcriptomics, metabolomics, and metagenomics) studies, and increasing evidence in these studies indicates that the biological architecture of complex traits involves a large number of omics variants each with minor effects but collectively accounting for the full phenotypic variability. Thus, a major challenge in many “ome‐wide” association analyses is to achieve adequate statistical power to identify multiple variants of small effect sizes, which is notoriously difficult for studies with relatively small‐sample sizes. A small‐sample adjustment incorporated in the kernel machine regression framework was proposed to solve this for association studies under various settings. However, such an adjustment in the generalized linear mixed model (GLMM) framework, which accounts for both sample relatedness and non‐Gaussian outcomes, has not yet been attempted. In this study, we fill this gap by extending small‐sample adjustment in kernel machine association test to GLMM. We propose a new Variant‐Set Association Test (VSAT), a powerful and efficient analysis tool in GLMM, to examine the association between a set of omics variants and correlated phenotypes. The usefulness of VSAT is demonstrated using both numerical simulation studies and applications to data collected from multiple association studies. The software for implementing the proposed method in R is available at https://www.github.com/jchen1981/SSKAT.
Ethnic variability associating gut and oral microbiome with obesity in children
Balakrishnan, Baskar , Selvaraju, Vaithinathan , Ayine, Priscilla , Yang, Lu , Geetha, Thangiah , Taneja, Veena , Babu, Jeganathan Ramesh , Geetha, Thangiah , Taneja, Veena , Balakrishnan, Baskar , Chen, Jun , Babu, Jeganathan Ramesh

Mayo Clinic

Gut Microbes | February 19, 2021 | Volume: 13 | Issue: 1 | Pages: No page available

10.1080/19490976.2021.1882926 | PMID 33596768 Get It

Predominance of Atopobium vaginae at Midtrimester: a Potential Indicator of Preterm Birth Risk in a Nigerian Cohort
Odogwu, Nkechi Martina , Onebunne, Chinedum Amara , Jeraldo, Patricio , Yang, Lu , Johnson, Stephen , Ayeni, Funmilola A. , Walther-António, Marina , Olayemi, Oladapo O., Omigbodun, Akinyinka , Walther-Antonio, Marina R S, Chia, Nicholas , Jeraldo, Patricio R , Walther-Antonio, Marina , Chen, Jun , Olayemi, Oladapo O.

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mSphere | February 2, 2021 | Volume: 6 | Issue: 1 | Pages: No page available

10.1128/msphere.01261-20 | PMID 33504666 Get It

Giving birth too soon accounts for half of all newborn deaths worldwide. Clinical symptoms alone are not sufficient to identify women at risk of giving birth too early, as such a pragmatic approach to reducing the incidence of preterm birth entails developing early strategies for intervention before it materializes.
Radiological Society of North America/Quantitative Imaging Biomarker Alliance Shear Wave Speed Bias Quantification in Elastic and Viscoelastic Phantoms
Palmeri, Mark L. , Milkowski, Andy , Barr, R. Graham , Carson, Paul L. , Couade, Mathieu , Chen, Shigao , Dhyani, Manish , Ehman, Richard L. , Garra, Brian S. , Gee, Albert, Guenette, Gilles, Hah, Zaegyoo , Lynch, Ted , Macdonald, Michael , Managuli, Ravi , Nightingale, Kathryn R. , Obuchowski, Nancy A. , Rouze, Ned C. , Morris, D. Cody , Fielding, Shana, Chan, Derek Y. , Choudhury, Kingshuk Roy , Yang, Siyun , Shamdasani, Vijay, Wear, Keith A. , Xie, Hua , Qiang, Bo, Rosenzweig, Stephen, Okamura, Yoko, McLaughlin, Glen, Chen, Yuling , Napolitano, David , Carlson, Lindsey , Erpelding, Todd N. , Barr, Richard , Carson, Paul , Dhyani, Manish , Ehman, Richard , Hah, Zaegyoo , Lynch, Ted , Macdonald, Michael , Managuli, Ravi , Miette, Veronique , Nightingale, Kathryn R , Obuchowski, Nancy , Rouze, Ned C , Morris, D Cody , Deng, Yufeng , Chan, Derek , Choudhury, Kingshuk , Samir, Anthony E , Urban, Matthew W , Wear, Keith , Ozturk, Arinc , Song, Pengfei , McAleavey, Stephen , Napolitano, David , Carlson, Lindsey , Hall, Timothy J , Chen, Jun , Miette, Véronique , Urban, Matthew W. , Song, Pengfei , Wang, Michael , Hall, Timothy J.

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Journal of Ultrasound in Medicine | January 10, 2021 | Volume: 40 | Issue: 3 | Pages: 569-581

10.1002/jum.15609 | PMID 33410183 Get It

ObjectivesTo quantify the bias of shear wave speed (SWS) measurements between different commercial ultrasonic shear elasticity systems and a magnetic resonance elastography (MRE) system in elastic and viscoelastic phantoms.MethodsTwo elastic phantoms, representing healthy through fibrotic liver, were measured with 5 different ultrasound platforms, and 3 viscoelastic phantoms, representing healthy through fibrotic liver tissue, were measured with 12 different ultrasound platforms. Measurements were performed with different systems at different sites, at 3 focal depths, and with different appraisers. The SWS bias across the systems was quantified as a function of the system, site, focal depth, and appraiser. A single MRE research system was also used to characterize these phantoms using discrete frequencies from 60 to 500 Hz.ResultsThe SWS from different systems had mean difference 95% confidence intervals of ±0.145 m/s (±9.6%) across both elastic phantoms and ± 0.340 m/s (±15.3%) across the viscoelastic phantoms. The focal depth and appraiser were less significant sources of SWS variability than the system and site. Magnetic resonance elastography best matched the ultrasonic SWS in the viscoelastic phantoms using a 140 Hz source but had a − 0.27 ± 0.027‐m/s (−12.2% ± 1.2%) bias when using the clinically implemented 60‐Hz vibration source.ConclusionsShear wave speed reconstruction across different manufacturer systems is more consistent in elastic than viscoelastic phantoms, with a mean difference bias of < ±10% in all cases. Magnetic resonance elastographic measurements in the elastic and viscoelastic phantoms best match the ultrasound systems with a 140‐Hz excitation but have a significant negative bias operating at 60 Hz. This study establishes a foundation for meaningful comparison of SWS measurements made with different platforms.
Renovascular Disease Induces Senescence in Renal Scattered Tubular-Like Cells and Impairs Their Reparative Potency
Chen, Xiao-Jun , Kim, Seo Rin , Jiang, Kai , Ferguson, Christopher M. , Zhu, Xiang-Yang, Eirin, Alfonso , Lerman, Lilach O. , Eirin, Alfonso , Tang, Hui Jun , Lerman, Amir

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Hypertension | January 4, 2021 | Volume: 77 | Issue: 2 | Pages: 507-518

10.1161/hypertensionaha.120.16218 | PMID 33390051 Get It

Scattered tubular-like cells (STCs), dedifferentiated renal tubular epithelial cells, contribute to renal self-healing, but severe injury might blunt their effectiveness. We hypothesized that ischemic renovascular disease (RVD) induces senescence in STC and impairs their reparative potency. CD24+/CD133+ STCs were isolated from swine kidneys after 16 weeks of RVD or healthy controls. To test their reparative capabilities in injured kidneys, control or RVD-STC (5×10 5 ) were prelabeled and injected into the aorta of 2 kidneys, 1-clip (2k,1c) mice 2 weeks after surgery. Murine renal function and oxygenation were studied in vivo 2 weeks after injection using micro-magnetic resonance imaging, and fibrosis, tubulointerstitial injury, capillary density, and expression of profibrotic and inflammatory genes ex vivo. STC isolated from swine RVD kidneys showed increased gene expression of senescence and senescence-associated secretory phenotype markers and positive SA-β-gal staining. Delivery of normal pig STCs in 2k,1c mice improved murine renal perfusion, blood flow, and glomerular filtration rate, and downregulated profibrotic and inflammatory gene expression. These renoprotective effects were blunted using STC harvested from RVD kidneys, which also failed to attenuate hypoxia, fibrosis, tubular injury, and capillary loss in injured mouse 2k,1c kidneys. Hence, RVD may induce senescence in endogenous STC and impair their reparative capacity. These observations implicate cellular senescence in the pathophysiology of ischemic kidney disease and support senolytic therapy to permit self-healing of senescent kidneys.