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75 citation(s) found for "Beltran, Chris".

Patient-specific deep learning model to enhance 4D-CBCT image for radiomics analysis
Zhang, Zeyu , Huang, Mi , Jiang, Zhuoran , Chang, Yushi , Lü, Ke , Yin, F , Tran, Phuoc , Wu, Dapeng , Beltran, Chris , Ren, Lei , Beltran, Chris J

Mayo Clinic

Physics in Medicine & Biology | March 21, 2022 | Volume: 67 | Issue: 8 | Pages: 085003

10.1088/1361-6560/ac5f6e | PMID 35313293 Get It

Abstract Objective. 4D-CBCT provides phase-resolved images valuable for radiomics analysis for outcome prediction throughout treatment courses. However, 4D-CBCT suffers from streak artifacts caused by under-sampling, which severely degrades the accuracy of radiomic features. Previously we developed group-patient-trained deep learning methods to enhance the 4D-CBCT quality for radiomics analysis, which was not optimized for individual patients. In this study, a patient-specific model was developed to further improve the accuracy of 4D-CBCT based radiomics analysis for individual patients. Approach. This patient-specific model was trained with intra-patient data. Specifically, patient planning 4D-CT was augmented through image translation, rotation, and deformation to generate 305 CT volumes from 10 volumes to simulate possible patient positions during the onboard image acquisition. 72 projections were simulated from 4D-CT for each phase and were used to reconstruct 4D-CBCT using FDK back-projection algorithm. The patient-specific model was trained using these 305 paired sets of patient-specific 4D-CT and 4D-CBCT data to enhance the 4D-CBCT image to match with 4D-CT images as ground truth. For model testing, 4D-CBCT were simulated from a separate set of 4D-CT scan images acquired from the same patient and were then enhanced by this patient-specific model. Radiomics features were then extracted from the testing 4D-CT, 4D-CBCT, and enhanced 4D-CBCT image sets for comparison. The patient-specific model was tested using 4 lung-SBRT patients’ data and compared with the performance of the group-based model. The impact of model dimensionality, region of interest (ROI) selection, and loss function on the model accuracy was also investigated. Main results. Compared with a group-based model, the patient-specific training model further improved the accuracy of radiomic features, especially for features with large errors in the group-based model. For example, the 3D whole-body and ROI loss-based patient-specific model reduces the errors of the first-order median feature by 83.67%, the wavelet LLL feature maximum by 91.98%, and the wavelet HLL skewness feature by 15.0% on average for the four patients tested. In addition, the patient-specific models with different dimensionality (2D versus 3D) or loss functions (L1 versus L1 + VGG + GAN) achieved comparable results for improving the radiomics accuracy. Using whole-body or whole-body+ROI L1 loss for the model achieved better results than using the ROI L1 loss alone as the loss function. Significance. This study demonstrated that the patient-specific model is more effective than the group-based model on improving the accuracy of the 4D-CBCT radiomic features analysis, which could potentially improve the precision for outcome prediction in radiotherapy.
RBE‐weighted dose and its impact on the risk of acute coronary event for breast cancer patients treated with intensity modulated proton therapy
Liu, Chunbo , Bradley, Julie A. , Beltran, Chris , Beltran, Chris J., Beltran, Chris J , Zheng, Dandan , Vega, Raymond B. Mailhot , Mendenhall, Nancy P. , Liang, Xiaoying

Mayo Clinic

Journal of Applied Clinical Medical Physics | January 21, 2022 | Volume: 23 | Issue: 4 | Pages: No page available

10.1002/acm2.13527 | PMID 35060317 Get It

AbstractPurposeTo evaluate the relative biological effectiveness (RBE)‐weighted dose to the heart and to estimate RBE uncertainties when assuming a constant RBE of 1.1, for breast cancer patients receiving intensity‐modulated proton therapy (IMPT). Further, to study the impact of RBE uncertainties on the risk of an acute coronary event (ACE).Material and methodsWe analyzed 20 patients who received IMPT to either the left breast (n = 10) or left chest wall (n = 10) and regional lymph nodes. The Monte Carlo simulation engine, MCsquare, was used to simulate the dose‐averaged linear energy transfer (LETd) map. The RBE‐weighted dose to the heart and its substructures was calculated using three different RBE models. The risk of ACE was estimated per its linear relationship with mean heart dose (MHD) as established by Darby et al.ResultsThe median MHD increased from 1.33 GyRBE assuming an RBE of 1.1 to 1.64, 1.87, and 1.99 GyRBE when using the RBE‐weighted dose models. The median values (and ranges) of the excess absolute risk of ACE were 0.4% (0.1%–0.8%) when assuming an RBE of 1.1, and 0.6% (0.2%–1.0%), 0.6% (0.2%–1.1%), and 0.7% (0.2%–1.1%) with the RBE‐weighted models. For our patient cohort, the maximum excess absolute risk of ACE increased by 0.3% with the RBE‐weighted doses compared to the constant RBE of 1.1, reaching an excess absolute ACE risk of 1.1%. The interpatient LETd variation was small for the relevant high‐dose regions of the heart.ConclusionAll three RBE models predicted a higher biological dose compared to the clinical standard dose assuming a constant RBE of 1.1. An underestimation of the biological dose results in underestimation of the ACE risk. Analyzing the voxel‐by‐voxel biological dose and the LET map alongside clinical outcomes is warranted in the development of a more accurate normal‐tissue complication probability model.
Design of a 3D patient‐specific collision avoidance virtual framework for half‐gantry proton therapy system
Dougherty, Jingjing M. , Whitaker, Thomas J. , Mundy, Daniel W. , Tryggestad, E., Beltran, Chris , Tryggestad, Erik J, Beltran, Chris J., Beltran, Chris J

Mayo Clinic

Journal of Applied Clinical Medical Physics | December 10, 2021 | Volume: 23 | Issue: 2 | Pages: No page available

10.1002/acm2.13496 | PMID 34890094 Get It

AbstractIntroductionThis study presents a comprehensive collision avoidance framework based on three‐dimension (3D) computer‐aided design (CAD) modeling, a graphical user interface (GUI) as peripheral to the radiation treatment planning (RTP) environment, and patient‐specific plan parameters for intensity‐modulated proton therapy (IMPT).MethodsA stand‐alone software application was developed leveraging the Varian scripting application programming interface (API) for RTP database object accessibility. The Collision Avoider software models the Hitachi ProBeat‐V half gantry design and the Kuka robotic couch with triangle mesh structures. Patient‐specific plan parameters are displayed in the collision avoidance software for potential proximity evaluation. The external surfaces of the patients and the immobilization devices are contoured based on computed tomography (CT) images. A “table junction‐to‐CT‐origin” (JCT) measurement is made for every patient at the time of CT simulation to accurately provide reference location of the patient contours to the treatment couch. Collision evaluations were performed virtually with the program during treatment planning to prevent four major types of collisional events: collisions between the gantry head and the treatment couch, gantry head and the patient's body, gantry head and the robotic arm, and collisions between the gantry head and the immobilization devices.ResultsThe Collision Avoider software was able to accurately model the proton treatment delivery system and the robotic couch position. Commonly employed clinical beam configuration and JCT values were investigated. Brain and head and neck patients require more complex gantry and patient positioning system configurations. Physical measurements were performed to validate 3D CAD model geometry. Twelve clinical proton treatment plans were used to validate the accuracy of the software. The software can predict all four types of collisional events in our clinic since its full implementation in 2020.ConclusionA highly efficient patient‐specific collision prevention program for scanning proton therapy has been successfully implemented. The graphical program has provided accurate collision detection since its inception at our institution.
Functional avoidance‐based intensity modulated proton therapy with 4DCT derived ventilation imaging for lung cancer
Dougherty, Jingjing M. , Castillo, Edward , Faught, Austin M. , Pepin, M. , Beltran, Chris , Guerrero, Thomas , Grills, Inga S., Vinogradskiy, Yevgeniy , Pepin, Mark, Beltran, Chris J., Beltran, Chris J , Pepin, Mark D , Castillo, Richard , Park, Sean S.

Mayo Clinic

Journal of Applied Clinical Medical Physics | June 23, 2021 | Volume: 22 | Issue: 7 | Pages: 276-285

10.1002/acm2.13323 | PMID 34159715 Get It

Abstract The primary objective is to evaluate the potential dosimetric gains of performing functional avoidance‐based proton treatment planning using 4DCT derived ventilation imaging. 4DCT data of 31 patients from a prospective functional avoidance clinical trial were evaluated with intensity modulated proton therapy (IMPT) plans and compared with clinical volumetric modulated arc therapy (VMAT) plans. Dosimetric parameters were compared between standard and functional plans with IMPT and VMAT with one‐way analysis of variance and post hoc paired student t‐test. Normal Tissue Complication Probability (NTCP) models were employed to estimate the risk of two toxicity endpoints for healthy lung tissues. Dose degradation due to proton motion interplay effect was evaluated. Functional IMPT plans led to significant dose reduction to functional lung structures when compared with functional VMAT without significant dose increase to Organ at Risk (OAR) structures. When interplay effect is considered, no significant dose degradation was observed for the OARs or the clinical target volume (CTV) volumes for functional IMPT. Using fV20 as the dose metric and Grade 2+ pneumonitis as toxicity endpoint, there is a mean 5.7% reduction in Grade 2+ RP with the functional IMPT and as high as 26% in reduction for individual patient when compared to the standard IMPT planning. Functional IMPT was able to spare healthy lung tissue to avoid excess dose to normal structures while maintaining satisfying target coverage. NTCP calculation also shows that the risk of pulmonary complications can be further reduced with functional based IMPT.
Dosimetric Assessment of a High Precision System for Mouse Proton Irradiation to Assess Spinal Cord Toxicity
Howard, Michelle E. , Denbeigh, Janet M. , Debrot, Emily , Garcia, D. , Remmes, Nicholas B. , Herman, Michael , Beltran, Chris , Garcia, Darwin A, Herman, Michael G., Beltran, Chris J., Beltran, Chris J , Garcia, Darwin A

Mayo Clinic

Radiation Research | May 20, 2021 | Volume: 195 | Issue: 6 | Pages: No page available

10.1667/rade-20-00153.1 | PMID 33826742 Get It

The dose magnifying glass quality assurance system for daily proton therapy range verification
Debrot, Emily , Mundy, Daniel W. , Guatelli, Susanna , Petasecca, Marco , Perevertaylo, Vladimir L. , Beltran, Chris , Rosenfeld, Anatoly , Debrot, E , Guatelli, S , Rosenfeld, A B , Beltran, Chris J

Mayo Clinic

Physics in Medicine & Biology | March 24, 2021 | Volume: 66 | Issue: 9 | Pages: 094001

10.1088/1361-6560/abf1b9 | PMID 33761472 Get It

Abstract Proton therapy has a distinct dosimetric advantage over conventional photon therapy due to its Bragg peak profile. This allows greater accuracy in dose delivery and dose conformation to the target, however it requires greater precision in setup, delivery and for quality assurance (QA) procedures. The AAPM TG 224 report recommends daily range and spot position checks with tolerance on the order of a millimetre. Daily QA systems must therefore be efficient for daily use and be capable of sub-millimetre precision however few suitable commercial systems are available. In this work, a compact, real-time daily QA system is optimised and characterised for proton range verification using an ad-hoc Geant4 simulation. The system is comprised of a monolithic silicon diode array detector embedded in a perspex phantom. The detector is orientated at an angular offset to the incident proton beam to allow range in perspex to be determined for flat proton fields. The accuracy of the system for proton range in perspex measurements was experimentally evaluated over the full range of clinical proton energies. The mean R 100 , R 90 and R 80 ranges measured with the system were accurate within ±0.6 mm of simulated ranges in a perspex phantom for all energies assessed. This system allows real-time read-out of individual detector channels also making it appropriate for temporal beam delivery diagnostics and for spot position monitoring along one axis. The system presented provides a suitable, economical and efficient alternative for daily QA in proton therapy.
Inhibition of ATM Induces Hypersensitivity to Proton Irradiation by Upregulating Toxic End Joining
Zhou, Qin , Howard, Michelle E. , Tu, Xinyi , Zhu, Qian , Denbeigh, Janet M. , Remmes, Nicholas B. , Herman, Michael , Beltran, Chris , Greipp, Patricia T. , Wang, Liewei , Johnson, Neil , Mutter, Robert W. , Herman, Michael G., Beltran, Chris J., Boughey, JC , Beltran, Chris J , Greipp, Patricia T , Yuan, Jian , Boughey, Judy C. , Goetz, Matthew P. , Sarkaria, Jann N. , Lou, Zhenkun

Mayo Clinic

Cancer Research | February 17, 2021 | Volume: 81 | Issue: 12 | Pages: 3333-3346

10.1158/0008-5472.can-20-2960 | PMID 33597272 Get It

Abstract Proton Bragg peak irradiation has a higher ionizing density than conventional photon irradiation or the entrance of the proton beam profile. Whether targeting the DNA damage response (DDR) could enhance vulnerability to the distinct pattern of damage induced by proton Bragg peak irradiation is currently unknown. Here, we performed genetic or pharmacologic manipulation of key DDR elements and evaluated DNA damage signaling, DNA repair, and tumor control in cell lines and xenografts treated with the same physical dose across a radiotherapy linear energy transfer spectrum. Radiotherapy consisted of 6 MV photons and the entrance beam or Bragg peak of a 76.8 MeV spot scanning proton beam. More complex DNA double-strand breaks (DSB) induced by Bragg peak proton irradiation preferentially underwent resection and engaged homologous recombination (HR) machinery. Unexpectedly, the ataxia-telangiectasia mutated (ATM) inhibitor, AZD0156, but not an inhibitor of ATM and Rad3-related, rendered cells hypersensitive to more densely ionizing proton Bragg peak irradiation. ATM inhibition blocked resection and shunted more DSBs to processing by toxic ligation through nonhomologous end-joining, whereas loss of DNA ligation via XRCC4 or Lig4 knockdown rescued resection and abolished the enhanced Bragg peak cell killing. Proton Bragg peak monotherapy selectively sensitized cell lines and tumor xenografts with inherent HR defects, and the repair defect induced by ATM inhibitor coadministration showed enhanced efficacy in HR-proficient models. In summary, inherent defects in HR or administration of an ATM inhibitor in HR-proficient tumors selectively enhances the relative biological effectiveness of proton Bragg peak irradiation. Significance: Coadministration of an ATM inhibitor rewires DNA repair machinery to render cancer cells uniquely hypersensitive to DNA damage induced by the proton Bragg peak, which is characterized by higher density ionization. See related commentary by Nickoloff, p. 3156
Proton and Heavy Particle Intracranial Radiosurgery
Lehrer, Eric J. , Prabhu, Arpan V. , Sindhu, Kunal K. , Lazarev, Stanislav , Peterson, Jennifer , Beltran, Chris , Furutani, Keith M. , Schlesinger, David, Sheehan, Jason P. , Peterson, Jennifer L., Furutani, Keith, Sindhu, Kunal K , Beltran, Chris J , Furutani, Keith M , Ruiz-García, Henry , Trifiletti, Daniel M.

Mayo Clinic

Biomedicines | January 3, 2021 | Volume: 9 | Issue: 1 | Pages: 31

10.3390/biomedicines9010031 | PMID 33401613 Get It

Stereotactic radiosurgery (SRS) involves the delivery of a highly conformal ablative dose of radiation to both benign and malignant targets. This has traditionally been accomplished in a single fraction; however, fractionated approaches involving five or fewer treatments have been delivered for larger lesions, as well as lesions in close proximity to radiosensitive structures. The clinical utilization of SRS has overwhelmingly involved photon-based sources via dedicated radiosurgery platforms (e.g., Gamma Knife® and Cyberknife®) or specialized linear accelerators. While photon-based methods have been shown to be highly effective, advancements are sought for improved dose precision, treatment duration, and radiobiologic effect, among others, particularly in the setting of repeat irradiation. Particle-based techniques (e.g., protons and carbon ions) may improve many of these shortcomings. Specifically, the presence of a Bragg Peak with particle therapy at target depth allows for marked minimization of distal dose delivery, thus mitigating the risk of toxicity to organs at risk. Carbon ions also exhibit a higher linear energy transfer than photons and protons, allowing for greater relative biological effectiveness. While the data are limited, utilization of proton radiosurgery in the setting of brain metastases has been shown to demonstrate 1-year local control rates >90%, which are comparable to that of photon-based radiosurgery. Prospective studies are needed to further validate the safety and efficacy of this treatment modality. We aim to provide a comprehensive overview of clinical evidence in the use of particle therapy-based radiosurgery.
We are ready for clinical implementation of Carbon Ion Radiotherapy in the United States
Beltran, Chris , Amos, Richard A. , Beltran, Chris J , Rong, Yi

Mayo Clinic

Journal of Applied Clinical Medical Physics | December 15, 2020 | Volume: 21 | Issue: 12 | Pages: 6-9

10.1002/acm2.13133 | PMID 33319499 Get It

Roadmap: proton therapy physics and biology
Paganetti, Harald , Beltran, Chris , Both, Stefan , Flanz, J., Grosshans, David R. , Knopf, Antje , Langendijk, Johannes A. , Nyström, Håkan, Raaymakers, Bas W. , Richter, Christian , Sawakuchi, Gabriel O. , Schippers, Marco, Teo, B, Unkelbach, Jan , Wohlfahrt, Patrick , Furutani, Keith, Sawakuchi, Gabriel O , Beltran, Chris J , Dong, Lei , Furutani, Keith M. , Grassberger, Clemens , Parodi, Katia , Shaitelman, Simona Flora , Lomax, Antony

Mayo Clinic

Physics in Medicine & Biology | November 23, 2020 | Volume: 66 | Issue: 5 | Pages: 05RM01

10.1088/1361-6560/abcd16 | PMID 33227715 Get It

Abstract The treatment of cancer with proton radiation therapy was first suggested in 1946 followed by the first treatments in the 1950s. As of 2020, almost 200 000 patients have been treated with proton beams worldwide and the number of operating proton therapy (PT) facilities will soon reach one hundred. PT has long moved from research institutions into hospital-based facilities that are increasingly being utilized with workflows similar to conventional radiation therapy. While PT has become mainstream and has established itself as a treatment option for many cancers, it is still an area of active research for various reasons: the advanced dose shaping capabilities of PT cause susceptibility to uncertainties, the high degrees of freedom in dose delivery offer room for further improvements, the limited experience and understanding of optimizing pencil beam scanning, and the biological effect difference compared to photon radiation. In addition to these challenges and opportunities currently being investigated, there is an economic aspect because PT treatments are, on average, still more expensive compared to conventional photon based treatment options. This roadmap highlights the current state and future direction in PT categorized into four different themes, ‘improving efficiency’, ‘improving planning and delivery’, ‘improving imaging’, and ‘improving patient selection’.