Citations

Clear

3309 citation(s) found for "Yu, Alexander".

Spatial Mass Spectrometry-Based Proteomic Analysis of Normal-Appearing Glomeruli from Young and Old Adults
Mangalaparthi, Kiran K. , Sachdeva, Gunveen S. , Shaik, Afsana Ansari , Venkataraman, Shilpa , Mullan, Aidan F. , Pujari, Ganesh P. , Madden, Benjamin , Asghar, Muhammad Sohaib , Sharma, Vidit , Alexander, Mariam P., Đenić, Aleksandar , Alexander, Mariam P. , Madden, Benjamin , Alexander, Mariam P , Larson, Nicholas B , Denic, Aleksandar , Pandey, Akhilesh , Rule, Andrew D , Asghar, Muhammad S , Mullan, Aidan , Larson, Nicholas B. , Pandey, Akhilesh , Rule, Andrew D. , Venkataraman, Shilpa

Mayo Clinic

Kidney360 | October 1, 2025 | Volume: 6 | Issue: 12 | Pages: 2071-2081

10.34067/kid.0000000986 | PMID 41032668 Get It

Key Points Increased protein expression of tissue inhibitor of metalloproteinase-3, glypican 6, synuclein γ , apolipoprotein A-4, and Ecto-5′-nucleotidase was observed in old adults compared with young adults. In old adults, overexpressed proteins were enriched in mitochondrial processes while under expressed proteins enriched in RNA metabolism. Validated differentially expressed proteins were not significantly correlated with kidney pathology after adjusting for age. Background Kidney aging is characterized by a loss of glomeruli, predominantly in the superficial cortex, with a resultant decline in GFR and an increased risk of various kidney-related diseases. The early molecular alterations in glomeruli associated with the aging process are not well studied. Methods We combined laser capture microdissection and mass spectrometry–based unbiased proteomic analysis of nonsclerosed, nonischemic glomeruli in the superficial cortex from young and old adults who underwent a radical nephrectomy for a tumor to understand the age-related molecular changes in glomeruli. Twenty-four young and 30 old adults were used for the discovery dataset, and the significant differentially expressed proteins were further validated using an independent set comprising six young and eight old adults. Results Kidneys from old adults had lower eGFR, less kidney parenchyma on computed tomography imaging, and more glomerulosclerosis and arteriosclerosis on histology. Quantitative proteomic analysis of nonsclerosed, nonischemic glomeruli identified increased expression of tissue inhibitor of metalloproteinase-3, glypican 6, synuclein γ , apolipoprotein A-4, and Ecto-5′-nucleotidase in old adults that were further validated in an independent set. Pathway analysis indicated that proteins with increased expression in old adults were enriched in mitochondrial translational processes, aerobic respiration, and TCA cycle, whereas proteins with decreased expression in old adults were enriched in mRNA splicing, mRNA processing, and nonsense mediated decay. Furthermore, validated differentially expressed proteins did not show any significant correlation with the kidney pathology independent of age group. Conclusions Overall, this study identified proteins that are specifically associated with the aging process in otherwise normal-appearing glomeruli.
Microsurgical obliteration of a superior petrosal dural arteriovenous fistula presenting with a symptomatic brainstem cavernous malformation
Naylor, Ryan M. , Pais, Antonio , Graepel, Stephen , Link, Michael J. , Pais, Alexander, Lanzino, Giuseppe

Mayo Clinic

Neurosurgical Focus: Video | October 1, 2025 | Volume: 13 | Issue: 2 | Pages: V2

10.3171/2025.7.focvid2553 | PMID 41113739 Get It

In this video, the authors present the microsurgical treatment of a superior petrosal dural arteriovenous fistula (dAVF) associated with a symptomatic hemorrhagic brainstem cavernous malformation in a 38-year-old male. The patient underwent a retrosigmoid craniotomy for cavernoma evacuation and fistula disconnection. Intraoperative indocyanine green angiography revealed cortical venous reflux not evident on catheter angiography, prompting reclassification to a higher-grade fistula. Postoperatively, the patient returned to neurological baseline, and follow-up imaging confirmed complete fistula obliteration, cavernoma resection, and new appearance of a developmental venous anomaly (DVA). This case highlights the dynamic nature of dAVF venous drainage and illustrates the rare co-occurrence of dAVF, DVA, and brainstem cavernoma. The video can be found here: https://stream.cadmore.media/r10.3171/2025.7.FOCVID2553
Arthroscopic Inverting Repair Technique for Inside‐Out Hip Labral Tears
Hayden, Alexander C. , Ina, Jason , Kang, Louis , Grigoriou, Emmanouil , Sierra, Rafael J. , Krych, Aaron J. , Hevesi, Mario , Cabarcas, Brandon C. , Krych, Aaron J , Sierra, Rafael J , Hevesi, Mario , Ina, Jason G , Kang, Louis S

Mayo Clinic

Arthroscopy Techniques | October 1, 2025 | Volume: 14 | Issue: 12 | Pages: No page available

10.1016/j.eats.2025.103904 | PMID 41541382 Get It

Abstract The acetabular labrum is a fibrocartilaginous structure that deepens the acetabular socket and helps maintain a suction seal. In patients with hip dysplasia, a distinct labral tear pattern called an inside‐out labral tear is often seen. This tear pattern is particularly challenging to correct via conventional techniques since the labrum can potentially remain everted and insufficiently restore the native hip labral suction seal after repair. An inverted hip labral repair technique is performed for this pathology at our institution and focuses on achieving optimal labral orientation to enhance the suction seal and joint stability, particularly in dysplastic hips. This Technical Note aims to describe the key surgical principles and clinical considerations of inverted hip labral repair. Technique Video video See video under supplementary data.
Quality assessment of artificial intelligence‐generated versus human‐written hospital summaries evaluating detail, usefulness, and continuity of care
Ryu, Alexander J. , Heaton, Heather A. , Challener, Douglas , Ayanian, Shant , Ryu, Alexander, O'horo, John, Heaton, Heather, Challener, Douglas W. , Ryu, Alexander J. , O’Horo, John C.

Mayo Clinic

Journal of Hospital Medicine | October 1, 2025 | Volume: 21 | Issue: 4 | Pages: 375-379

10.1002/jhm.70163 | PMID 41028943 Get It

Abstract Background Hospital discharge summaries are critical for ensuring continuity of care, but their quality often varies. Large language models (LLMs) have the potential to standardize and enhance the efficiency of this documentation process. Objectives To evaluate the quality of hospital discharge summaries created by an LLM‐based hospital course drafting tool created by Epic Systems compared with human‐written summaries. Methods Retrospective study at a single tertiary‐care institution in 2024. The cohort included 100 adult hospitalizations lasting >72 h across medical and surgical dismissing services. No interventions were performed. Summaries (LLM‐generated vs. human‐written) were independently reviewed using a standardized rubric covering nine domains (e.g., comprehensiveness, clarity, relevance). Scores were normalized and compared. Readability was assessed using Flesch Reading Ease. Results LLM‐generated summaries outperformed human‐written summaries across all criteria ( p < .05), with the greatest difference observed in comprehensiveness (LLM median 0.62 vs. human −0.23). Human‐written summaries from surgical services scored lower than those from medical services, but LLM performance was consistent across both. Human summaries had higher Flesch Reading Ease scores (33.11 vs. 26.2; p < .05), reflecting simpler language. Conclusions LLM‐generated summaries demonstrated superior quality, consistency, and clinical utility compared with human‐written summaries, highlighting their potential to improve documentation efficiency and standardization.
ER stress upregulates S100A11 in steatohepatitis models via epigenetic modifications within the lipotoxicity-influenced enhancer
Daniel, P. Vineeth , Erickson, Hanna , Hamdan, Feda H. , Puri, Gyanendra, Nishihara, Takahito, YOON, Y, Mauer, Amy S. , Thompson, Jill , Revzin, Alexander , Daniel, P Vineeth , Choi, Daheui , Nakao, Yasuhiko , Dasgupta, Debanjali , Malhi, Harmeet

Mayo Clinic

Journal of Clinical Investigation | September 30, 2025 | Volume: 135 | Issue: 23 | Pages: No page available

10.1172/jci191074 | PMID 41027000 Get It

Metabolic dysfunction–associated steatohepatitis (MASH) is a progressive liver disease characterized by complex interactions between lipotoxicity, ER stress responses, and immune-mediated inflammation. We identified enrichment of the proinflammatory alarmin S100 calcium-binding protein A11 (S100A11) on extracellular vesicles stimulated by palmitate-induced lipotoxic ER stress with concomitant upregulation of hepatocellular S100A11 abundance in an IRE1A-XBP1s–dependent manner. We next investigated the epigenetic mechanisms that regulate this stress response. Publicly available human liver ChIP-Seq GEO datasets demonstrated a region of histone H3 lysine 27 (H3K27) acetylation upstream of the S100A11 promoter. H3K27 acetylation ChIP-qPCR demonstrated a positive correlation between lipotoxic ER stress and H3K27 acetylation of the region, which we termed the lipotoxicity-influenced enhancer (LIE) domain. CRISPR-mediated repression of the LIE domain reduced palmitate-induced H3K27 acetylation and corresponding S100A11 upregulation in Huh7 cells and immortalized mouse hepatocytes. Silencing of the murine LIE in 2 independent steatohepatitis models demonstrated reduced S100a11 upregulation and attenuated liver injury. We confirmed H3K27 acetylation and XBP1s occupancy at the LIE domain in human MASH liver samples and an increase in hepatocyte-derived S100A11-enriched extracellular vesicles in MASH patient plasma. Our studies demonstrate a LIE domain that mediates hepatic S100A11 upregulation. This pathway may be a potential therapeutic target in MASH.
Sinonasal Sarcomas Management: An International Consensus Statement
Caspani, F , Camarda, Anna Maria , Provenzano, Salvatore , Meço, Cem , Ferrari, Marco , Harrabi, Semi , Hosni, Ali, Italiano, Antoine, Vérillaud, Benjamin , Castelnuovo, Paolo, Nicolai, Piero, Su, Shirley Y. , Eloy, Jean Anderson , Fiore, Maria Rosaria, Palmer, James, Oliden, Victor Castro , Tos, Angelo Paolo Dei , Casali, Paolo G. , Dufresne, Armelle , Orlandi, Ester , Wormald, Peter‐John, Herman, Philippe , Carrau, Ricardo, Hanna, Ehab Y., Provenzano, Salvatore , Wang, Eric W , Ferrari, Marco , Schreiber, Alberto , Lechner, Matt , Eloy, Jean Anderson , Georgalas, Christos , Turri-Zanoni, Mario , Meço, Cem , Su, Shirley Y , Vinciguerra, Alessandro , Valentini, Marco , Šurda, Pavol , Campos, Fernando Augusto Batista , Martín‐Broto, Javier , Guadagnolo, B. Ashleigh , Navarria, Pierina , Hindi, Nadia , Italiano, Antoîne , Trifiletti, Daniel M. , Kasper, Bernd , Schreiber, Alberto , Castelnuovo, Paolo, Nicolai, Piero , Dallan, Iacopo , Chacón, Matías , Thariat, Juliette , Valverde, Claudia María , Lechner, Matt , Blay, Jean‐Yves , Brahmi, Mehdi , Greto, Daniela , Lugowska, Iwona A. , van Zele, Thibaut , Psaltis, Alkis J. , Sangalli, Claudia , Wormald, Peter‐John , Hanna, Ehab Y., Licitra, Lisa , Turri‐Zanoni, Mario , Battaglia, Paolo

Mayo Clinic

International Forum of Allergy & Rhinology | September 30, 2025 | Volume: 16 | Issue: 1 | Pages: 55-69

10.1002/alr.70038 | PMID 41025537 Get It

ABSTRACT Introduction Sinonasal sarcomas are exceedingly rare entities, constituting less than 7% of head and neck sarcomas. Their complex histology needs specialized treatment, which is often based on multimodal approaches including surgery, radiation therapy, and/or chemotherapy. This manuscript aims to gather expert opinions to establish common management principles for sinonasal sarcomas. Methods This international consensus followed a modified Delphi method in seven steps, including statements definition by the core group, expert panel recruitment, and a two‐round survey. Sixty‐two statements on sinonasal sarcoma management were developed. Experts from multiple continents participated, and results were anonymized and analyzed between March and May 2025. Results A total of 44 invited experts were recruited, 43.2% otorhinolaryngologists/head and neck surgeons, 31.8% medical oncologists, and 25% radiation oncologists. Participants varied in age and experience, representing Europe (70.5%), North America (18.2%), South America (6.8%), and Asia (4.5%). Among all histologies, biphenotypic sarcoma, chondrosarcoma, leiomyosarcoma, and myofibrosarcoma are principally treated with an upfront surgical management, differently from Ewing sarcoma and rhabdomyosarcoma in which chemotherapy, eventually associated with radiotherapy, is often chosen. In the remaining histologies (angiosarcoma, liposarcoma, malignant peripheral nerve sheath tumor [MPNST], osteosarcoma, and synovial sarcoma), a precise multimodal treatment is less standardized and needs to be discussed on a case‐by‐case basis. Conclusion Sinonasal sarcomas require a histology‐driven approach to determine upfront treatment, whether surgical, medical, or multimodal. Despite this structured strategy, prognosis remains highly variable across subtypes. Multidisciplinary evaluation and individualized management in referral centers are crucial to address the biological diversity and anatomical complexity of these rare malignancies.
Magnetic Resonance Spectroscopy of 2‐Hydroxyglutarate and Glycine in Adult Subjects With Brainstem Gliomas
Ganji, Sandeep , An, Zhongxu , Davis, L. Taylor , Berry, Julia D., Luo, Leo Y. , Mohler, Alexander, Merrell, Ryan , Kelly, Patrick D. , Thompson, Reid C., Mickey, Bruce , Gore, John C. , Maher, Elizabeth A. , Choi, Changho , Ganji, Sandeep K, An, Zhongxu , Luo, Leo Y , Kelly, Patrick D , Ganji, Sandeep K , Tiwari, Vivek , Pinho, Marco C. , McKnight, Colin D. , Mobley, Bret C. , Malloy, Craig R. , Patel, Toral

Mayo Clinic

NMR in Biomedicine | September 30, 2025 | Volume: 38 | Issue: 11 | Pages: No page available

10.1002/nbm.70153 | PMID 41024693 Get It

ABSTRACTSurgical biopsy of brainstem tumors carries a risk of neurological injury. We performed magnetic resonance spectroscopy (MRS) of 2‐hydroxyglutarate (2HG) and glycine in patients with brainstem tumors to assess the feasibility of detecting and quantifying 2HG in the brainstem to obviate the need for a diagnostic biopsy and to establish the clinical significance of glycine MRS in brainstem tumors in vivo. Twenty adult patients with radiographically identified presumed brainstem gliomas were prospectively enrolled in the study. Proton MRS was obtained at 3T with a protocol tailored for detection of 2HG and glycine (TE 97‐ms PRESS). Spectra were fit using LCModel software and in‐house basis signals of metabolites and lipids. The metabolite concentrations were quantified with reference to water and examined with respect to clinical outcomes, including postgadolinium MRI and overall survival time. MRS data from 19 patients were included in subsequent analysis, excluding suboptimal data from one patient. Tumors with elevated 2HG (> 1.9 mM, N = 8) and undetectable 2HG (< 0.3 mM, N = 11) were clearly distinguishable. Tumors with elevated glycine (> 1.5 mM, N = 4) showed rapid progression. Kaplan–Meier survival analyses with metabolite measures demonstrated that tumors with 2HG higher than 1.0 mM were significantly associated with a favorable prognosis (p = 0.01). In contrast, tumors with glycine higher than 2.5 mM showed a strong association with poor survival (p = 0.0005). The data confirm detection of 2HG in brainstem tumors at a concentration that is consistent with an IDH mutation and expected good prognosis, whereas elevated glycine in brainstem tumors portends rapid tumor progression and a worse prognosis.
Dynamic cholangiocyte responses in a murine model of reversible cholestasis: macrophage remodeling and NF-Y-mediated TGFβ1 expression
Olson, Kirsta E., Krishnan, Anuradha , Splinter, Patrick L., Wixom, Alexander Q. , Guicciardi, Maria Eugenia , Jalan‐Sakrikar, Nidhi , Azad, Adiba , LaRusso, Nicholas F. , Gores, Gregory J. , Gores, Gregory J. , Splinter, Patrick, Guicciardi, Maria E , Sakrikar, Nidhi Jalan , Wixom, Alexander Q , LaRusso, Nicholas F

Mayo Clinic

American Journal of Physiology-Gastrointestinal and Liver Physiology | September 29, 2025 | Volume: 329 | Issue: 5 | Pages: G597-G613

10.1152/ajpgi.00243.2025 | PMID 41021740 Get It

Cholangiocyte pathophysiological activation was examined in a model of murine cholestasis. CX3CR1 + macrophages are recruited to the periportal region, likely mediated by cholangiocyte expression of CX3CL1. Cholangiocyte transcriptomics from cholestatic mice display activation of a “pathogen-induced cytokine storm” pathway, and exhibit activation of the transcription factor NF-Y. In human cholangiocytes, NF-Y promotes expression of the profibrogenic ligand TGFβ1. These observations provide insights into the cholestatic cholangiocyte pathobiology contributing to periductal inflammation and fibrosis.