Citations

Clear

2819 citation(s) found for "Yu, Liu".

Abstract 2336: Targeting CDK1 and MEK/ERK overcomes apoptosis resistance in BRAF V600E human colorectal cancer cells
Zhang, Peng , Liu, Weizhen , Zeng, Xiangyu , Stebhardt, Klaus, Tao, Kaixiong , Huang, Shengbing, Zeng, Xiangyu , Kawakami, Hisato , Sinicrope, Frank A.

Mayo Clinic

Cancer Research | August 17, 2018 | Volume: 78 | Issue: 13_Supplement | Pages: 2336-2336

10.1158/1538-7445.am2018-2336 Get It

Abstract Background. Mutation of the BRAF(V600E) oncogene occurs in ~8% of human colorectal cancers (CRC) and its inhibition is associated with treatment resistance that is due, in part, to paradoxical re-activation of MEK/ERK signaling. Recently, pathway analysis identified cyclin-dependent kinase 1 (CDK1) upregulation in a subset of human BRAFV600E CRCs. We determined whether CDK1 antagonism can enhance the efficacy of MEK inhibition in BRAFV600E CRC cell lines. Methods. Manipulation of gene expression was achieved by siRNA and/or ectopic expression, or using isogenic cell pairs. Cells were treated with the CDK1 selective inhibitor RO-3306 or dinaciclib (CDK1,2,5,9 inhibitor) alone or combined with the MEK inhibitor cobimetinib. Apoptosis was quantified by Annexin V staining with flow cytometry; apoptotic signaling was analyzed by immunoblotting of caspase-8 phosphorylation and caspase cleavage. Long-term cell survival was evaluated by clonogenic assay. In vivo efficacy of the drug combination was determined in a murine flank xenograft model. Results. BRAFV600E CRC cell lines expressed CDK1 whose siRNA knockdown or pharmacological inhibition by RO-3306 or dinaciclib was shown to sensitize them to apoptosis (annexin V labeling). The combination of RO-3306 or dinaciclib with cobimetinib cooperatively enhanced apoptosis and reduced clonogenic survival compared to drug monotherapy. Cells isogenic or ectopic for BRAFV600E displayed apoptosis resistance to CDK inhibitors, as did cells with ectopic expression of constitutively active MEK. CDK1 inhibition by RO-3306 or dinaciclib induced a caspase-8-dependent apoptosis shown by caspase-8 restoration in deficient NB7 cells that enhanced dinaciclib-induced caspase-3 cleavage. Furthermore, CDK inhibitors suppressed procaspase-8 phosphorylation at S387 shown by drug withdrawal that restored phospho-S387 and increased cell mitosis. In a CRC xenograft model, dinaciclib plus cobimetinib produced significantly greater tumor growth inhibition in association with a caspase-dependent apoptosis than did either drug alone. Analysis of TCGA datasets revealed overexpression of CDK1 in human CRCs compared to normal colonic tissue. An inverse relationship existed between expression of CDK1 and the cell cycle inhibitor p16. In CRC cells, ectopic p16 was shown to downregulate CDK1 expression. In conclusion, our data establish CDK1 as a novel mediator of apoptosis resistance in BRAFV600E CRC cells lines whose combined targeting with CDK and MEK/ERK inhibitors may represent an effective therapeutic strategy. Citation Format: Peng Zhang, Hisato Kawakami, Weizhen Liu, Xiangyu Zeng, Klaus Stebhardt, Kaixiong Tao, Shengbing Huang, Frank A. Sinicrope. Targeting CDK1 and MEK/ERK overcomes apoptosis resistance in BRAFV600E human colorectal cancer cells [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2018; 2018 Apr 14-18; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2018;78(13 Suppl):Abstract nr 2336.
Abstract 2334: Sialylation of the TNFR1 death receptor promotes cancer cell survival
Holdbrooks, Andrew T., Liu, Zhongyu , Bullard, Daniel C. , Schultz, Matthew , Bellis, Susan L.

Mayo Clinic

Cancer Research | August 17, 2018 | Volume: 78 | Issue: 13_Supplement | Pages: 2334-2334

10.1158/1538-7445.am2018-2334 Get It

Abstract Studies have well-established that activation of TNFR1, a ubiquitously expressed cell surface receptor, by TNF can induce either cell survival or cell death signaling cascades, however, the mechanisms regulating TNFR1 to initiate these disparate outcomes are poorly understood. TNF-induced apoptosis is initiated by clustering of activated TNFR1 at the cell surface, followed by internalization of the receptor complexes and subsequent caspase activation. Conversely, surface retention of activated TNFR1 promotes cell survival signaling mediated by NFκB and MAPKs pathways. Our group has identified a glycosylation-dependent mechanism that controls this TNFR1 signaling switch (i.e. apoptosis vs. survival). Specifically, we have found that TNFR1 activity is modified by the addition of a distinct sugar, an α2-6 linked sialic acid, by the Golgi sialyltransferase, ST6Gal-I. Importantly, ST6Gal-I is highly upregulated in numerous cancer types, and through its sialylation of a select cohort of cell surface receptors, various studies have indicated ST6Gal-I as a potent tumor cell survival factor. The effect of sialylation on TNFR1 was examined in multiple cancer cell models, including leukemia and epithelial cancer cell lines with forced overexpression or knockdown of ST6Gal-I. These models show that TNFR1 sialylation blocks TNF-induced apoptosis (indicated by the inhibition of caspase activation), and data from our group suggests that the underlying mechanism of this inhibition of apoptosis involves the sialylation-driven interference of TNFR1 oligomerization and internalization. Considering sialylated TNFR1 is retained on the cell surface following activation, we hypothesize that cells with abundant ST6Gal-I not only block TNFR1-mediated apoptosis but also divert signaling towards survival, indicated by increased activity and expression of many pro-survival factors (NFkB, AKT, etc.). Based on these collective findings, we conclude that the ST6Gal-I-mediated sialylation of TNFR1 controls the cellular response to TNF by blocking TNFR1 internalization, resulting in apoptosis inhibition and the promotion of survival signaling. Considering the tumor microenvironment is rich in immune cell-derived TNF, we posit that ST6Gal-I protects tumor cells within this inflammatory milieu by providing a mechanism by which tumor cells can evade immune cell killing. Citation Format: Andrew T. Holdbrooks, Matthew J. Schultz, Zhongyu Liu, Daniel C. Bullard, Susan L. Bellis. Sialylation of the TNFR1 death receptor promotes cancer cell survival [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2018; 2018 Apr 14-18; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2018;78(13 Suppl):Abstract nr 2334.
Anesthesia and the developing brain: A way forward for laboratory and clinical research
Disma, Nicola , O’Leary, James D. , Loepke, Andreas W. , Brambrink, Ansgar M. , Becke, Karin , Clausen, Nicola Groes , Graaff, Jurgen C. de , Liu, Fang , Hansen, Tom G. , McCann, Mary Ellen , Salorio, Cynthia F. , Soriano, Sulpicio G. , Sun, Lena S. , Szmuk, Peter, Vutskits, László , Clausen, Nicola G , De Graaff, Jurgen C , Davidson, Andrew J , Warner, David O.

Mayo Clinic

Pediatric Anesthesia | August 17, 2018 | Volume: 28 | Issue: 9 | Pages: 758-763

10.1111/pan.13455 | PMID 30117228 Get It

Summary All commonly used general anesthetics have been shown to cause neurotoxicity in animal models, including nonhuman primates. Opinion, however, remains divided over how cumulative evidence from preclinical and human studies in this field should be interpreted and its translation to current practices in pediatric anesthesia and surgery. A group of international experts in laboratory and clinical sciences recently convened in Genoa, Italy, to evaluate the current state of both laboratory and clinical research and discuss future directions for basic, translational, and clinical studies in this field. This paper describes those discussions and conclusions. A central goal identified was the importance of continuing to pursue laboratory research efforts to better understand the biological pathways underlying anesthesia neurotoxicity. The distinction between basic and translational experimental designs in this field was highlighted, and it was acknowledged that it will be important for future animal research to try to causally link structural changes with long‐term cognitive abnormalities. While inherent limitations will continue to affect the ability of even large observational cohorts to determine if anesthesia impacts neurodevelopment or behavioral outcomes, the importance of conducting further large well‐designed cohort studies was also emphasized. Adequately powered cohorts could clarify which populations are at increased risk, provide information on environmental and healthcare‐related risk modifiers, and guide future interventional trials. If anesthetics cause structural or functional adverse neurological effects in young children, alternative or mitigating strategies need to be considered. While protective or mitigating strategies have been repeatedly studied in animals, there are currently no human data to support alternative anesthetic strategies in clinical practice. Lastly, it was noted that there is still considerable debate over the clinical relevance of anesthesia neurotoxicity, and the need to evaluate the impact of other aspects of perioperative care on neurodevelopment must also be considered.
Denaturation Fingerprinting: Two Related Mutation Detection Methods Especially Advantageous for High G+C Regions
Liu, Qiang, Weinshenker, Brian G. , Wingerchuk, Dean M. , Sommer, Steve S., Weinshenker, Brian G

Mayo Clinic

BioTechniques | August 15, 2018 | Volume: 24 | Issue: 1 | Pages: 140-147

10.2144/98241rr01 | PMID 9454966 Get It

In a Blinded Analysis, Restriction Endonuclease Fingerprinting Detects All the Mutations in a 1.9-kb Segment
Feng, Jinong, Sommer, Steve S., Liu, Qiang

Mayo Clinic

BioTechniques | August 7, 2018 | Volume: 23 | Issue: 5 | Pages: 836-839

10.2144/97235bm15 | PMID 9383547 Get It

Inhibition of PCR Amplification by a Point Mutation Downstream of a Primer
Thorland, Erik C., Sommer, Steve S., Liu, Qiang

Mayo Clinic

BioTechniques | August 7, 2018 | Volume: 22 | Issue: 2 | Pages: 292-300

10.2144/97222st01 | PMID 9043701 Get It

Sirt6 deficiency impairs corneal epithelial wound healing
Zhu, Shuang , Miller, Jordan D. , Merkley, Kevin H., Tilton, Ronald G. , Liu, Hua , Hu, Xiaobing, Liu, Rong , Miller, Jordan

Mayo Clinic

Aging | August 2, 2018 | Volume: 10 | Issue: 8 | Pages: 1932-1946

10.18632/aging.101513 | PMID 30070973 Get It

Bi-directional Dideoxy Fingerprinting (Bi-ddF): Rapid and Efficient Screening for Mutations in the Big Blue TM Transgenic Mouse Mutation Detection System
Sommer, Steve S., Haavik, Jan , Nishino, Hiroshi, Liu, Qiang

Mayo Clinic

BioTechniques | August 2, 2018 | Volume: 20 | Issue: 6 | Pages: 988-994

10.2144/96206bm11 | PMID 8780870 Get It

The Development of an Effective Bacterial Single-Cell Lysis Method Suitable for Whole Genome Amplification in Microfluidic Platforms
Liu, Yuguang , Cockell, Charles S. , Leya, Thomas , Baqué, Mickaël , Walther-António, Marina , Leya, Thomas , Walther-Antonio, Marina , Schulze‐Makuch, Dirk , Vera, Jean-Pierre Paul De

Mayo Clinic

Micromachines | July 25, 2018 | Volume: 9 | Issue: 8 | Pages: 367

10.3390/mi9080367 | PMID 30424300 Get It

Single-cell sequencing is a powerful technology that provides the capability of analyzing a single cell within a population. This technology is mostly coupled with microfluidic systems for controlled cell manipulation and precise fluid handling to shed light on the genomes of a wide range of cells. So far, single-cell sequencing has been focused mostly on human cells due to the ease of lysing the cells for genome amplification. The major challenges that bacterial species pose to genome amplification from single cells include the rigid bacterial cell walls and the need for an effective lysis protocol compatible with microfluidic platforms. In this work, we present a lysis protocol that can be used to extract genomic DNA from both gram-positive and gram-negative species without interfering with the amplification chemistry. Corynebacterium glutamicum was chosen as a typical gram-positive model and Nostoc sp. as a gram-negative model due to major challenges reported in previous studies. Our protocol is based on thermal and chemical lysis. We consider 80% of single-cell replicates that lead to >5 ng DNA after amplification as successful attempts. The protocol was directly applied to Gloeocapsa sp. and the single cells of the eukaryotic Sphaerocystis sp. and achieved a 100% success rate.