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279 citation(s) found for "Stephens, DH".

Outcomes of Patients with Richter Transformation without Prior Chemoimmunotherapy for CLL/SLL: An International Multicenter Retrospective Study
Kittai, Adam S. , Miller, Sarah , Allan, John N. , Brander, Danielle M. , Byrd, John C. , Danilov, Alexey V. , Dvorak‐Kornaus, Kaitlyn, Freedman, Hannah, Hampel, Paul J. , Islam, Prioty , Rai, Manoj, Rogers, Kerry A. , Schade, Jake , Skarbnik, Alan P , Spurgeon, Stephen E. , Zulfa, Omer, Woyach, Jennifer A. , Byrd, John C , Huang, Ying , Bhat, Seema A. , Bond, David A. , Chavez, Julio C , Chong, Elise A. , Davids, Matthew S. , Ding, Wei , Dowling, Mark R. , Ho, Carrie , Hwang, Steven R. , Jain, Nitin , Matasar, Matthew J. , Miller, Cecelia , Parry, Erin M. , Rabe, Kari G. , Rai, Manoj, Raess, Philipp W. , Roeker, Lindsey E. , Rhodes, Joanna , Saha, Aditi , Scott, Hamish S. , Shadman, Mazyar , Shouse, Geoffrey , Stephens, Deborah M. , Thompson, Meghan C , Thompson, Philip A , Wang, Yucai , Wierda, William G. , Yano, Max , Zulfa, Omer

Mayo Clinic

Blood | December 1, 2023 | Volume: 142 | Issue: Supplement 1 | Pages: 497-497

10.1182/blood-2023-182114 Get It

Background: Richter Transformation (RT) refers to the development of an aggressive lymphoma in the setting of chronic lymphocytic leukemia/small lymphocytic lymphoma (CLL/SLL). Small molecule inhibitors (SMI), such as the Bruton tyrosine kinase inhibitors (BTKi) and BCL2 inhibitors (BCL2i), have revolutionized the treatment of CLL/SLL. Prior studies evaluated outcomes of patients (pts) with RT in an era where chemoimmunotherapy (CIT) was typically used to treat CLL/SLL. Now that SMI are standard of care, fewer pts with CLL/SLL receive CIT, therefore we sought to determine which variables predict survival in pts who developed RT without prior CIT exposure for CLL/SLL. Methods: We conducted an international multicenter retrospective study of pts from 11 academic centers. Pts with RT occurring as large B-cell lymphoma who did not previously receive CIT (e.g., fludarabine, cyclophosphamide, bendamustine, chlorambucil) for their CLL/SLL were included. We collected pt, disease, and treatment (tx) characteristics. RT was categorized into 3 groups: “Concurrent RT,” defined as RT and CLL/SLL diagnosed simultaneously (within 3 months [mos]); “RT w/o prior CLL/SLL tx,” defined as RT and CLL/SLL diagnosed >3 mos apart with the CLL/SLL never treated; and “RT with prior non-CIT tx for CLL/SLL” defined as having received prior CLL/SLL tx. Overall survival (OS) was measured from RT diagnosis (Dx) and estimated using the Kaplan-Meier method. Cox regression model was used to identify prognostic factors associated with OS. Results: 242 pts were identified. At CLL/SLL Dx, 66% of pts had unmutated IGHV, 37% had del17p/ TP53 disruption, and 20% had trisomy 12. At RT Dx, 56% of the RT with prior non-CIT tx for CLL/SLL group had a del17p/ TP53 disruption versus 27% for the concurrent RT group and 18% for the RT w/o prior CLL/SLL tx groups. Median time from CLL/SLL Dx to RT Dx was 47 mos (range 3-394) for RT w/o prior CLL/SLL tx and 46 mos (range 4-218) for RT with prior non-CIT tx for CLL/SLL. Pts with prior non-CIT tx for CLL/SLL received a median of 1 (range 1-5) prior tx. 86% of pts previously received a BTKi or a BCL2i for tx of CLL/SLL (54% BTKi only, 5% BCL2i only, 27% both). The remaining 14% had been treated with an anti-CD20 monoclonal antibody (MoAb), steroids, lenalidomide, radiation, or alemtuzumab. 85% of pts developed RT while on active tx with SMI. Median age at RT Dx was 69 years (range 37-92). At RT Dx, 38% and 21% of pts had del17p/ TP53 disruption, and trisomy 12 in CLL/SLL tissue, respectively. At RT Dx, there was no difference in highest SUV on PET (median 16, range 2.9-65.6), LDH (median 325, range 103-8162, ULN range 180-271), largest lymph node in diameter (median 4.9 cm, range 0-17.1), Ki-67 (median 80%, range 5%-100%), rate of GCB subtype (27%), presence of MYC translocation (20%), or CLL/SLL and RT clonal relationship (81%) for those pts tested amongst the 3 groups ( Table). The most common 1 st line tx for RT was CIT with or w/o radiation and/or steroids (76%), followed by CIT plus SMI (13%), SMI single agent or combination (7%), and other (4%, which includes anti-CD20 MoAb). Median follow-up from RT Dx was 42.3 mos; the median OS for the entire cohort was 25.8 mos (95% CI: 16.8-49.1). Pts with RT after non-CIT tx for CLL/SLL had a significantly worse OS (median 8.2 mos [95% CI: 5.6-14.3]) than pts with concurrent RT (median 46.3 mos [95% CI: 23.8-96.9]) and RT w/o prior CLL/SLL tx (median 63.5 mos [95% CI: 28.3-70.3]) ( Figure). From an exploratory univariable analysis, we found RT after non-CIT tx for CLL/SLL compared to concurrent RT (HR 2.32 [95% CI: 1.55-3.46]), RT Dx age (HR for 5-year increase 1.14 [95% CI: 1.05-1.23]), del17p/ TP53 disruption (HR 2.27 [95% CI: 1.45-3.56]), and LDH (HR for 2-fold increase 1.37 [95% CI: 1.20-1.58]) were prognostic for worse OS. Conclusions: This is the largest cohort of pts who developed RT having received only SMI with no CIT for their CLL reported, thus reflecting the current treatment landscape. Despite being CIT-naïve, pts in our series who received tx for their CLL/SLL and then developed RT had a short OS, underscoring the need to develop better therapies for these pts. In contrast, as in other published analyses (Wang Haematologica 2020), pts w/o prior tx for CLL/SLL had more favorable outcomes, with a median OS of approximately 5 years. Further analysis to determine PFS and OS by tx for RT for pts who have been treated with SMI for their CLL/SLL is ongoing.
Prediction of Time-to-First Treatment (TTFT) in Favorable-Risk Chronic Lymphocytic Leukemia (CLL) Patients Using a Novel Stratification through Transcriptome Risk Scoring
Feusier, Julie , Williams, Justin A. , Jones, Brandt, Madsen, Michael J. , Camp, Nicola J. , Hu, Boyu , Avery, Brian J. , Waller, Rosalie G. , Halwani, Ahmad , Stephens, Deborah M.

Mayo Clinic

Blood | December 1, 2023 | Volume: 142 | Issue: Supplement 1 | Pages: 1913-1913

10.1182/blood-2023-178248 Get It

Background: CLL is the most prevalent adult leukemia with a highly heterogenous genetic landscape leading to extremely varied clinical outcomes. Previously, CLL patients with immunoglobulin heavy chain variable region ( IGHV) mutated status and presence of deletion 13q14 [del(13q)] were identified as favorable-risk with most patients remaining on lifetime observation. However, other intrinsic factors contributing to CLL disease progression and leading to treatment initiation remain unknown. Our goal was to identify patients at high-risk of progression with added predictive value (APV) beyond IGHV-status and presence of del(13q). Methods: Flow cytometry was used to sort CD19+CD5+ malignant cells in peripheral blood from CLL patients at Huntsman Cancer Institute at University of Utah and triple sequencing generated (tumor whole transcriptome and paired tumor-normal whole exome data). We used SPECTRA, a novel dimension reduction transcriptome approach, to derive a set of independent, intrinsic, quantitative transcriptome tumor variables from 249 CLL patients with quality-controlled transcriptome sequence data. From this set, 182 treatment-naïve (TN) patients with quality-controlled clinical variables were used as a discovery cohort set to derive a SPECTRA-based risk score for TTFT using multivariable Cox proportional hazards modeling. Event time was date of patient specimen acquisition to initiation of frontline therapy with patients censored at last follow-up or death. Gaussian mixture modeling (GMM) was performed to identify evidence for distinct risk groups within the quantitative risk score. GMM-risk groups, and further stratifications by IGHV mutational and del(13q) status, were used in hazard ratios (HR) and to illustrate differences in Kaplan-Meier time-to-event curves. An independent publicly available dataset of 548 TN CLL patients with clinical and transcriptome data for CD19+ enriched cells was used for replication. Results: SPECTRA produced 19 quantitative spectra variables to describe most of the expression variation across the 249 CLL patients. In multivariable Cox modeling for TTFT, 7 spectra were significant and retained in a final model, which GMM separated into a bi-modal distribution and defined high (N=83) and low-risk (N=99) groups (HR=5.7, 95% confidence interval [CI] 3.4-9.7). In a post-hoc model including IGHV mutational and del(13q) status, the spectra-risk score showed significant APV beyond both factors (p<0.001 for both). The discovery study timeframe was 6.3 years (y) and included 109 IGHV-mutated and 75 del(13q) patients. In the IGHV-mutated patients, median TTFT (mTTFT) was significantly shorter for spectra-high risk patients (3.1y) vs. spectra-low risk patients (median not reached [NR]; p<0.001). Similarly, in the del(13q) patients, mTTFT was significantly shorter in high-risk patients (3.3y) compared to median NR for spectra-low (p<0.001) ( Figure). Importantly, stratification of patients into low- and high-risk SPECTRA scores provided significant additional information for prediction of TTFT than IGHV mutational and del(13q) status ( Figure). For validation, we applied the same spectra-risk score to the independent data set containing 301 IGHV-mutated and 278 del(13q) CLL patients. In the replication set, the mTTFT in the IGHV-mutated patients who were spectra-high was 3.3y vs. 11.2y in spectra-low (p<0.001). Similarly, in the replication set of del(13q) patients, spectra-high-risk patients had a mTTFT of 2.7y vs. 10.7y for spectra-low (p<0.001). Conclusion: A transcriptome risk score utilizing novel SPECTRA variables identified a substantial subset of CLL patients with IGHV-mutated status and presence of del(13q) who have uncharacteristically short TTFT, but who would be classified as favorable risk under current best practice stratification. Future directions include validating our results with external patient cohorts from Mayo Clinic and investigating the genetic and transcriptomic profile of SPECTRA low- and high-risk cohorts to determine targetable pathways for treatment.
Characterization of telomere variant repeats using long reads enables allele-specific telomere length estimation
Stephens, Zachary, Kocher, Jean‐Pierre

Mayo Clinic

No container title available | November 30, 2023 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-3673861/v1 Get It

Abstract Telomeres are regions of repetitive DNA at the ends of linear chromosomes which protect chromosome ends from degradation. Telomere lengths have been extensively studied in the context of aging and disease, though most studies use average telomere lengths which are of limited utility. We present a method for identifying all 92 telomere alleles from long read sequencing data. Individual telomeres are identified using variant repeats proximal to telomere regions, which are unique across alleles. This high-throughput and high-resolution characterization of telomeres could be foundational to future studies investigating the roles of specific telomeres in aging and disease.
Mortality and Morbidity of Heart Failure Hospitalization in Adult Patients With Congenital Heart Disease
Agasthi, Pradyumna , Houten, Holly K. Van , Yao, Xiaoxi , Jain, C. Charles , Egbe, Alexander C. , Warnes, Carole A. , Miranda, William R. , Dunlay, Shannon M. , Stephens, Elizabeth H. , Johnson, Jonathan N. , Connolly, Heidi M. , Van Houten, Holly K , Egbe, Alexander C , Burchill, Luke J , Yao, Xiaoxi , Dunlay, Shannon , Burchill, Luke J.

Mayo Clinic

Journal of the American Heart Association | November 29, 2023 | Volume: 12 | Issue: 23 | Pages: No page available

10.1161/jaha.123.030649 | PMID 38018491 Get It

Background Little is known about outcomes following heart failure (HF) hospitalization among adults with congenital heart disease (CHD) in the United States. We aim to compare the outcomes of HF versus non‐HF hospitalizations in adults with CHD. Methods and Results Using a national deidentified administrative claims data set, patients with adult congenital heart disease (ACHD) hospitalized with and without HF (ACHDHF+, ACHDHF−) were characterized to determine the predictors of 90‐day and 1‐year mortality and quantify the risk of mortality, major adverse cardiac and cerebrovascular events, and health resource use. Cox proportional hazard regression was used to compare ACHDHF+ versus ACHDHF− for risk of events and health resource use. Of 26 454 unique ACHD admissions between January 1, 2010 and December 31, 2020, 5826 (22%) were ACHDHF+ and 20 628 (78%) were ACHDHF−. The ACHD HF+ hospitalizations increased from 6.6% to 14.0% ( P <0.0001). Over a mean follow‐up period of 2.23 ± 2.19 years, patients with ACHDHF+ had a higher risk of mortality (hazard ratio [HR], 1.86 [95% CI, 1.67–2.07], P <0.001), major adverse cardiac and cerebrovascular events (HR, 1.73 [95% CI, 1.63–1.83], P <0.001) and health resource use including rehospitalization (HR, 1.09 [95% CI, 1.05–1.14], P <0.001) and increased postacute care service use (HR, 1.56 [95% CI, 1.32–1.85], P <0.001). Cardiology clinic visits within 30 days of hospital admission were associated with lower 90‐day and 1‐year all‐cause mortality (odds ratio [OR], 0.62 [95% CI, 0.49–0.78], P <0.001; OR, 0.69 [95% CI, 0.58–0.83], P <0.001, respectively). Conclusions HF hospitalization is associated with increased risk of mortality and morbidity with high health resource use in patients with ACHD. Recent cardiology clinic attendance appears to mitigate these risks.
The Effect of Implant Density on Adolescent Idiopathic Scoliosis Fusion
Larson, A. Noelle , Polly, David W. , Kelly, Michael P. , Richards, B. Stephens , Garg, Sumeet , Parent, Stefan , Weinstein, Stuart L. , Crawford, Charles H. , Blakemore, Laurel C. , Oetgen, Matthew E. , Kremers, Walter K. , Marks, Michelle C. , Brearley, Ann M. , Aubin, Carl‐Éric , Sucato, Daniel J. , Labelle, Hubert , Group, the Minimize Implants Maximize Outcomes Study, Kelly, Michael P , Richards, B Stephens , Garg, Sumeet , Parent, Stefan , Weinstein, Stuart L , Crawford, Charles H , Sanders, James O , Blakemore, Laurel C , Oetgen, Matthew E , Fletcher, Nicholas D , Kremers, Walter K , Marks, Michelle Claire , Brearley, Ann M , Sucato, Daniel J , Larson, A Noelle , Polly, David , Sponseller, Paul D. , Shah, Suken A. , Erickson, Mark A. , Group, the Minimize Implants Maximize Outcomes Study

Mayo Clinic

Journal of Bone and Joint Surgery | November 16, 2023 | Volume: 106 | Issue: 3 | Pages: 180-189

10.2106/jbjs.23.00178 | PMID 37973031 Get It

Background: Severe adolescent idiopathic scoliosis (AIS) can be treated with instrumented fusion, but the number of anchors needed for optimal correction is controversial. Methods: We conducted a multicenter, randomized study that included patients undergoing spinal fusion for single thoracic curves between 45° and 65°, the most common form of operatively treated AIS. Of the 211 patients randomized, 108 were assigned to a high-density screw pattern and 103, to a low-density screw pattern. Surgeons were instructed to use ≥1.8 implants per spinal level fused for patients in the high-implant-density group or ≤1.4 implants per spinal level fused for patients in the low-implant-density group. The primary outcome measure was the percent correction of the coronal curve at the 2-year follow-up. The power analysis for this trial required 174 patients to show equivalence, defined as a 95% confidence interval (CI) within a ±10% correction margin with a probability of 90%. Results: In the intention-to-treat analysis, the mean percent correction of the coronal curve was equivalent between the high-density and low-density groups at the 2-year follow-up (67.6% versus 65.7%; difference, −1.9% [95% CI: −6.1%, 2.2%]). In the per-protocol cohorts, the mean percent correction of the coronal curve was also equivalent between the 2 groups at the 2-year follow-up (65.0% versus 66.1%; difference, 1.1% [95% CI: −3.0%, 5.2%]). A total of 6 patients in the low-density group and 5 patients in the high-density group required reoperation (p = 1.0). Conclusions: In the setting of spinal fusion for primary thoracic AIS curves between 45° and 65°, the percent coronal curve correction obtained with use of a low-implant-density construct and that obtained with use of a high-implant-density construct were equivalent. Level of Evidence: Therapeutic Level I . See Instructions for Authors for a complete description of levels of evidence.
3D reconstruction of murine mitochondria reveals changes in structure during aging linked to the MICOS complex
Vue, Zer , Neikirk, Kit , Vang, Larry , Shao, Jianqiang, Crabtree, Amber , Murphy, Alexandria C. , Jenkins, Brenita C. , Prasad, Praveena , Evans, Chantell S. , Mungai, Margaret , Killion, Mason , Stephens, Dominique C., Christensen, Trace , Lam, Jacob , Phillips, Mark , Daneshgar, Nastaran , Koh, Ho‐Jin , Koh, Alice, Devine, Nina Garcia, Arnold, Kenneth R. , Chavarin, Valeria Vanessa , Robinson, Ryan Daniel , Gaddy, Jennifer A. , Sweetwyne, Mariya T. , Wilson, Genesis , Zaganjor, Elma , Kezos, James , Dondi, Cristiana , Reddy, Anilkumar K. , Quintana, Anita M. , Ocorr, Karen , Murray, Sandra , Exil, Vernat , Riggs, Blake , Mobley, Bret C. , Gómez, José A. , McReynolds, Melanie R. , Hinton, Antentor , Killion, Mason , Wilson, Genesis , Ocorr, Karen , Exil, Vernat , Hinton, Antentor , Murray, Sandra A , Lam, Jacob , Evans, Chantell S , Garza-López, Edgar , Katti, Prasanna , Beasley, Heather K. , Marshall, Andrea G. , Taylor, Brittany , Rodriguez, Benjamin, Davis, Jamaine S. , Saleem, Mohammad , Scudese, Estêvão , Chakraborty, Moumita , Glancy, Brian , Kirabo, Annet , Dai, Dao‐Fu , Damo, Steven M. , Gomez, Jose A.

Mayo Clinic

Aging Cell | November 14, 2023 | Volume: 22 | Issue: 12 | Pages: No page available

10.1111/acel.14009 | PMID 37960952 Get It

Abstract During aging, muscle gradually undergoes sarcopenia, the loss of function associated with loss of mass, strength, endurance, and oxidative capacity. However, the 3D structural alterations of mitochondria associated with aging in skeletal muscle and cardiac tissues are not well described. Although mitochondrial aging is associated with decreased mitochondrial capacity, the genes responsible for the morphological changes in mitochondria during aging are poorly characterized. We measured changes in mitochondrial morphology in aged murine gastrocnemius, soleus, and cardiac tissues using serial block‐face scanning electron microscopy and 3D reconstructions. We also used reverse transcriptase‐quantitative PCR, transmission electron microscopy quantification, Seahorse analysis, and metabolomics and lipidomics to measure changes in mitochondrial morphology and function after loss of mitochondria contact site and cristae organizing system (MICOS) complex genes, Chchd3 , Chchd6 , and Mitofilin . We identified significant changes in mitochondrial size in aged murine gastrocnemius, soleus, and cardiac tissues. We found that both age‐related loss of the MICOS complex and knockouts of MICOS genes in mice altered mitochondrial morphology. Given the critical role of mitochondria in maintaining cellular metabolism, we characterized the metabolomes and lipidomes of young and aged mouse tissues, which showed profound alterations consistent with changes in membrane integrity, supporting our observations of age‐related changes in muscle tissues. We found a relationship between changes in the MICOS complex and aging. Thus, it is important to understand the mechanisms that underlie the tissue‐dependent 3D mitochondrial phenotypic changes that occur in aging and the evolutionary conservation of these mechanisms between Drosophila and mammals.
Response to Reader Comment: Continuing the Quest for Hemostasis: Can Factor Eight Inhibitor Bypassing Activity (FEIBA) Bypass Post-Pump Coagulopathy?
Swan, Elena Ashikhmina , Stephens, Elizabeth H. , Ashikhmina Swan, Elena

Mayo Clinic

World Journal for Pediatric and Congenital Heart Surgery | November 8, 2023 | Volume: 15 | Issue: 1 | Pages: 138-138

10.1177/21501351231211257 | PMID 37936379 Get It

Novel approach to prenatal predictors of outcomes for fetuses with severe Ebstein anomaly
Narang, Kavita , Wyatt, Michelle A. , O’Leary, Patrick W. , Qureshi, M. Yasir , Kolbe, Amy B. , Stephens, Elizabeth H. , Dearani, Joseph A. , Ruano, Rodrigo , O’Leary, Patrick , Dearani, Joseph A. , Wyatt, Michelle , O'Leary, Patrick , Kolbe, Amy , Qureshi, Muhammad Y , Ruano, Rodrigo

Mayo Clinic

The Journal of Maternal-Fetal & Neonatal Medicine | October 31, 2023 | Volume: 36 | Issue: 2 | Pages: No page available

10.1080/14767058.2023.2271626 | PMID 37904503 Get It

The devil’s in the details: Exploring historically low board pass rates in Blood Banking/Transfusion Medicine
Adkins, Brian D. , Usmani, Amena , Jacobs, Jeremy W. , Booth, Garrett S. , Jacobs, Jeremy W , Booth, Garrett , Adkins, Brian David , Stephens, Laura D.

Mayo Clinic

American Journal of Clinical Pathology | October 4, 2023 | Volume: 161 | Issue: 2 | Pages: 108-110

10.1093/ajcp/aqad127 | PMID 37793032 Get It