Citations

Institution: Mayo Clinic Clear

Showing 10 of 108036 citations.

Echocardiography-Based, Artificial Intelligence-Enabled Electrocardiography (AI-ECG) for Diastolic Hemodynamics Phenotyping in Acute Heart Failure (AHF)
Wong, Yee Weng, Abbasi, Muhannad , Lee, Eunjung , Tsaban, Gal, Attia, Zachi I. , Friedman, Paul A., Noseworthy, Peter A. , Lopez-Jimenez, F., Chen, H H, Lin, Grace , Scott, Luis R. , Ezzeddine, Omar F. Abou, Oh, Jae K., López-Jiménez, Francisco , Noseworthy, Peter A , Lopez-Jimenez, Francisco , Attia, Zachi I , Lin, Grace , Wong, Yee W , Tsaban, Gal , Friedman, Paul A. , Chen, Horng H. , AbouEzzeddine, Omar F. , Oh, Jae K.

No container title available | March 6, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.03.05.26347763 Get It

ABSTRACT Background Acute heart failure (AHF) exhibits marked heterogeneity in diastolic hemodynamics, yet comprehensive echocardiographic assessment of diastolic function (DF) and filling pressure (FP) is often infeasible. We evaluated whether artificial intelligence–enabled electrocardiography (AI-ECG) could provide scalable DF grading and FP estimation in hospitalized AHF patients. Methods We retrospectively studied adults hospitalized for AHF across Mayo Clinic sites (2013–2023) who received ≥1 dose of intravenous loop diuretic and had paired 12-lead ECG and TTE. The previously validated AI-ECG DF model was applied without retraining to generate four DF grades and a continuous FP probability. Clinical outcomes were all-cause mortality and heart failure rehospitalization. Associations with clinical severity markers and echocardiographic indices were examined. Kaplan–Meier survival analysis and adjusted multivariable Cox proportional hazards models were performed. Exploratory analyses examine the kinetics of change in FP probability and impact on mortality. Results Among 11,513 patients (median age 75 years, 39% female), AI-ECG DF grading was feasible in 100%, whereas echocardiographic DF was indeterminate in 44% of clinically eligible patients. In 2,582 patients with determinate echocardiographic DF, AI-ECG FP probability discriminated TTE Grade 2–3 dysfunction with AUC 0.85 (95% CI 0.83 – 0.86). Higher AI-ECG DF grades were associated with higher comorbidity burden, worse NYHA class, elevated NT-proBNP, higher MAGGIC scores, elevated PCWP, and more advanced structural remodeling. After multivariable adjustment, AI-ECG DF remained independently associated with mortality (hazard ratio [HR] 1.25, 95% CI 1.16–1.35 for Grade 2; HR 1.44, 95% CI 1.33–1.56 for Grade 3 versus Normal/Grade 1). Combining AI-ECG DF with MAGGIC scores yielded ordered risk gradients, with highest mortality in patients with both high MAGGIC and Grade 2–3 DF. Among patients with serial ECGs, improvement in FP probability was independently associated with lower mortality (HR 0.85, 95% CI 0.79–0.91), whereas worsening did not show a consistent adverse gradient beyond baseline DF. Conclusions In a large, geographically diverse AHF cohort, AI-ECG DF grading was universally feasible, correlated with established hemodynamic severity markers, and provided independent prognostic information beyond established risk factors, supporting its role as a pragmatic, scalable diastolic biomarker in AHF. CLINICAL PERSPECTIVE What Is New? In 11,513 hospitalized acute heart failure (HF) patients, artificial intelligence-enabled electrocardiography provided diastolic function grading in 100% of patients from a single 12-lead ECG without requiring additional clinical variables, compared with 56% feasibility for guideline-based echocardiography grading. AI-ECG diastolic function grades correlated with established marker of severity (NYHA functional class, NT-proBNP, MAGGIC risk scores, and pulmonary capillary wedge pressure) and remained independently associated with both mortality and HF rehospitalization after multivariable adjustment. Serial AI-ECG measurements identified post-discharge filling pressure trajectories, with improvement independently associated with 15% lower mortality, a first demonstration that longitudinal ECG assessment can track post-discharge hemodynamic recovery. What Are the Clinical Implications? AI-ECG transforms the universally obtained 12-lead ECG into an actionable hemodynamic biomarker that addresses the critical gap when echocardiographic diastolic function assessment is indeterminate or unavailable in acute HF patients. Despite markedly different hemodynamic severity and long-term outcomes across AI-ECG diastolic function grades, hospitalization length of stay did not differ, suggesting advanced diastolic dysfunction represents occult risk not easily recognized during routine acute care and highlighting the need for improved post-discharge risk stratification. The continuous filling pressure probability metric enables longitudinal monitoring of post-discharge hemodynamic status using serial routine ECGs, potentially identifying patients requiring intensified follow-up or specialist referral.
A Substance Use Disorder Virtual Treatment and Research Platform: A Proof of Concept
Oesterle, Tyler , Bormann, Nicholas L. , Michael, Katina, Oesterle, Tyler S , Bormann, Nicholas L , Lifson, Mark A. , Michael, Katina

IEEE Pulse | March 6, 2026 | Volume: 16 | Issue: 6 | Pages: 53-63

10.1109/mpuls.2025.3640837 | PMID 41790854 Get It

Differentiating radiation necrosis from recurrent brain metastases using magnetic resonance elastography
Aunan‐Diop, Jan Saip , Friismose, Ancuta Ioana , Hojo, Emi , Pettersen, Jeanette Krogh, Grønhøj, Mads Hjortdal , Pedersen, Christian Bonde , Mussmann, Bo, Halle, Bo, Poulsen, F. Rom, Mussmann, Bo Redder , Poulsen, Frantz Rom , Mussmann, Bo , Friismose, Ancuta I , Hojo, Emi , Poulsen, Frantz Rom , Yin, Ziying , Petersen, Jeanette Krogh , Halle, Bo

No container title available | March 6, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.03.04.26347674 Get It

Abstract Background Conventional MRI cannot reliably distinguish radiation necrosis (RN) from recurrent metastasis after cranial radiotherapy, as both can show similar enhancement despite different biology. We tested whether these entities are mechanically non-equivalent in vivo and separable by MRE-derived viscoelastic metrics and perilesional interface-instability features. Methods In a prospective, histopathology-anchored cohort, 11 post-radiotherapy enhancing lesions were classified as RN (n=3) or recurrent/progressive tumor (n=8). MRE was acquired at 3.0 T with single-frequency 60-Hz excitation to derive storage modulus (G′), loss modulus (G″), and complex shear modulus magnitude (|G*|). Co-primary endpoints were median tumor G′ and |G*|, each tested one-sided (RN > tumor) with Holm correction across the two co-primary tests. Median tumor G″ was tested two-sided. A prespecified secondary 6-endpoint family (absolute and tumor/NAWM-normalized G′, G″, and |G*|) was analyzed with Benjamini–Hochberg FDR control. Exploratory instability mapping in a 0–6 mm peritumoral shell generated interface-topology metrics, including convexity. Results Absolute tumor-core medians were higher in RN than tumor for |G*| (1.79 vs 1.32 kPa; Cliff’s δ=0.67; q=0.10), G′ (1.62 vs 1.09 kPa; δ=0.50; q=0.14), and G″ (0.81 vs 0.46 kPa; δ=0.75; q=0.10). NAWM normalization improved separation: tumor/NAWM |G*| (2.26 vs 1.41; δ=0.92; q=0.04) and tumor/NAWM G″ (2.67 vs 0.87; δ=1.00; q=0.04) were FDR-significant. Convexity also differentiated RN from tumor (0.49 vs 0.36; δ=1.00; MWU p=0.01). Conclusions Tumor/NAWM G″, tumor/NAWM |G*|, convexity, and tumor G″ emerged as the strongest candidate features, indicating that RN is mechanically harder and more dissipative than recurrent metastasis. Signal strength was high (Cliff’s δ up to 1.00) but should be interpreted cautiously given sample size. Exploratory analyses further suggest that instability mapping captures biologically relevant interface behavior. These findings support a mechanics-based RN-versus-recurrence framework and justify prespecified, preregistered external validation.
PPSEBM: An Energy-Based Model with Progressive Parameter Selection for Continual Learning
Li, Dingcheng , Gao, Rujun, Zamani, Mahmoud , Mi, Feng , Khan, Latifur , Li, Xiaodi , Gao, Rujun

2025 IEEE International Conference on Big Data (BigData) | March 6, 2026 | Volume: No volume available | Issue: No issue available | Pages: 4643-4652

10.1109/bigdata66926.2025.11402168 Get It

Gene Portals: A Framework for Integrating Clinical, Functional, and Structural Evidence into Rare Disease Variant Classification
Brünger, Tobias , Krey, Ilona , Kim, Suyeon, Klöckner, Chiara , Myers, Scott J, Johannesen, Katrine M. , Stefanski, Arthur , Taylor, Gary, Macnee, Marie , Dahl, Rebekka S., Yuan, Hongjie, Kim, Sukhan, Helbig, Ingo, Pan, Jen, Kurganov, Erkin , Baez, David, Zuberi, Sameer M., Lerche, Holger, May, Patrick, Ivaniuk, Alina, Meskis, Mary Anne , Hood, Veronica , Schust, Leah F., Freed, Amber, Froelich, Steven, Deng, Alexander T., Bouman, Arjan , Hajianpour, M.J. , Pal, Deb K. , Danvoye, Leslie, Lederer, Damien , BALCI, TUĞÇE, Hagebeuk, Eveline , Heidlebaugh, Alexis R. , Oetjens, Kathryn F., Striano, Pasquale, Williams, Sarah Drewes, Engelen, Kalene van , Howell, Katherine B. , Khoury, Jean , Benke, Tim A., Strehlow, Vincent , Platzer, Konrad, Ramsey, Amy J, Manaster, Lisa, Malepati, Sunitha, Fox, Pangkong M., Noebels, Jeffrey, Chung, Wendy, Poduri, Annapurna, Stripe, Laina Lusk, Ruggiero, Sarah M., Cohen, Stacey, Wilmarth, Olivia, Prentice, Anna Jenne, Cha, Esther, Budnik, Nikita , Kramer, Audra A. , Gh, Zhang, Palotie, Aarno, Daly, Mark J., Møller, R., Lemke, Johannes R., Lal, Dennis , Møller, Rikke S. , May, Patrick , Bruenger, Tobias , Pan, Jen Q , Farrant, Mark , Wyllie, David J A , Bosselmann, Christian , Mantegazza, Massimo , May, Patrick , Ivaniuk, Alina , Goodspeed, Kimberly , Trinidad, Marena , Aledo-Serrano, Ángel , Pal, Deb K , Platzer, Konrad , Ruggiero, Sarah M , Daly, Mark J. , George, Alfred L , Brunklaus, Andreas , Møller, Rikke S , Myers, Scott J. , Taylor, Gary, Pérez‐Palma, Eduardo , Schorge, Stéphanie , Dahl, Rebekka S. , Perszyk, Riley E. , Bajaj, Sunanjay , Helbig, Ingo , Wollmuth, Lonnie P. , Báez-Nieto, David , Zuberi, Sameer M. , Boßelmann, Christian M. , Mantegazza, Massimo , Cestèle, Sandrine , Ivaniuk, Alina , Kang, Jing‐Qiong , Gati, Cornelius , Montanucci, Ludovica , Wüster, Arthur , Deng, Alexander T. , Borovikov, Artem O. , Sharkov, Artem A. , Bouman, Arjan , Hoffman, Trevor L. , Howell, Katherine B. , Benke, Tim A. , Platzer, Konrad , Ramsey, Amy J. , Fox, Pangkong , Noebels, Jeffrey L. , Chung, Wendy K. , Poduri, Annapurna , Lusk, Laina G. , Cohen, Stacey , Smith, Lacey A. , Boesch, Sylvia , Prentice, Anna Jenne , Hommersom, Marina P. , Vanoye, Carlos G. , Nothnagel, Michael , Palotie, Aarno V. , George, Alfred L. , Zárate, Yuri A. , Brunklaus, Andreas , Traynelis, Stephen F. , Lemke, Johannes R.

No container title available | March 6, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.64898/2026.03.05.26347086 | PMID 41822692 Get It

Abstract Rare Mendelian disorders affect 300-400 million people globally. Although genetic testing has become widely adopted, gene-specific evidence for tailored variant interpretation remains scattered across resources. We present Gene Portals, a framework for gene-centered multimodal knowledge bases that co-localize expert-harmonized clinical data, functional assays, population variation, structural annotations and gene-specific ACMG/AMP specifications within a single resource. A modular interface integrates this unified evidence with VCEP-refined ACMG specifications to enable automated gene-specific variant classification, infer molecular mechanisms, and support cross-gene analyses. We demonstrate the framework’s utility across five Gene portals spanning eleven neurodevelopmental disorder-associated genes, integrating data from 4,423 individuals with 2,838 unique variants, 36,149 ClinVar submissions, and 1,044 expert-curated molecular readouts. By organizing evidence that is otherwise dispersed across multiple sources into a unified, queryable framework, the SCN, GRIN, CACNA1A, SATB2 and SLC6A1 Gene Portals became widely used community resources and provide an extensible template for standardized rare-disease variant interpretation and mechanism-aware discovery.
A Power Simulation Guide for Choosing Longitudinal Endpoints and Analysis Methods for Continuous Data
Novotny, Paul J. , Loprinzi, C. L, Le-Rademacher, Jennifer, Le‐Rademacher, Jennifer

No container title available | March 6, 2026 | Volume: No volume available | Issue: No issue available | Pages: No page available

10.21203/rs.3.rs-8845743/v1 Get It

Abstract Background: The choice of analysis method and primary endpoint can have a major impact on the results of a clinical trial. The power of these analysis methods is affected by the response patterns, response distributions, autocorrelations, missing values, and the number of times the endpoint is evaluated. Guidelines are needed to help investigators select statistical methods that give investigators the best chance of finding an intervention effect if one truly exists. Methods: Monte Carlo methods were used to determine how different endpoints are affected by changes in study assumptions. Copula simulation methods were applied to prior Alliance hot flash and CIPN studies to determine which endpoints would provide the highest power for future studies. Results: Longitudinal analyses had higher power if there was a plateau response, there were fewer missing values, responses were collected more often, and there was lower correlation between responses from the same subject. Having skewed data did not greatly affect power. Prior hot flash and CIPN studies showed skewed data, plateau response rates, and very high autocorrelations. Conclusion: Hot flash and CIPN studies are more likely to find true effects if the analysis method uses data at all of the time points and adjusts for baseline. Collecting data at more time points and reducing the missing data rates also increase study power.
Monogenic Etiologies of Kidney Cysts in the Pediatric Population
Bozkurt, Elif G. , Najeeb, Mohamad Sheikh, Yang, Hana , Kemppainen, Jennifer L., Smith, Byron H. , Gregory, Adriana , Baker, Tracy A., Thompson, W. Foster, Khalifa, Muhammed, Cruz, Conrad , Kouri, Anne M. , Tran, Cheryl L. , Sas, David J. , Cramer, Carl H. , Kline, Timothy L. , Torres, Vicente, Chebib, Fouad T., Harris, Peter, Thompson, Whitney S. , Baker, Tracy A. , Sheikh Najeeb, Mohamad, Gregory, Adriana V , Baker, Tracy A , Thompson, Whitney S , Dahl, Neera K , Kline, Timothy L , Torres, Vicente E , Chebib, Fouad T , Harris, Peter C , Hanna, Christian , Smith, Byron , Dahl, Neera K. , Chebib, Fouad T. , Harris, Peter C. , Hanna, Christian

Clinical Journal of the American Society of Nephrology | March 6, 2026 | Volume: 21 | Issue: 6 | Pages: 984-996

10.2215/cjn.0000001027 | PMID 41790507 Get It

Key Points In a cohort of children, 79% of families with kidney cysts had a monogenic diagnosis. Resolved cases were more likely to have a family history of kidney cysts and unresolved cases more often had unilateral cysts. Broad genetic testing revealed genetic diversity and informed prognosis and clinical management in childhood kidney cysts. Background Pediatric kidney cysts may indicate an underlying genetic disorder, yet the full spectrum of causes remains incompletely defined. With advances in genetic testing enabling broader evaluation, this study assessed the diagnostic utility of comprehensive genetic testing in a broad pediatric cohort with kidney cysts and characterized the underlying etiological diversity. Methods This observational cohort study included patients younger than 18 years enrolled between January 2020 and June 2024 at a single tertiary center. Genetic testing used targeted multigene or custom curated exome/genome sequencing panels, with segregation analysis when available. Eligible participants had at least two cysts without family history, one cyst with positive family history, or enlarged echogenic kidneys on prenatal ultrasound; those with congenital anomalies of the kidney and urinary tract associated with cysts were excluded. Clinical presentation was categorized as symptomatic, incidental, prenatal, or family screening. Primary outcomes were diagnostic yield and distribution of pathogenic variants. Results Among 109 patients (median age 7.6 years, 53% female), genetic testing identified a definitive diagnosis in 81 of 100 tested patients (81%) from 72 families (79%; 14 disorders). PKD1 variants were most common (45%), while PKD2 accounted for 7%. Other causes included HNF1B or 17q12 deletions (13%), minor autosomal dominant polycystic kidney disease genes (11%; GANAB, NEK8, IFT140 ), monoallelic PKHD1 (3%), and biallelic PKHD1 (8%), while syndromic ciliopathy genes accounted for 5%. A positive family history of cystic kidney disease was more common among patients with a genetic diagnosis (54% versus 11%; P = 0.008). Patients without an identified genetic diagnosis more often had unilateral cysts (26% versus 4%; P = 0.53). Diagnosis by clinical symptoms was the most genetically diverse category. Conclusions Comprehensive genetic testing in pediatric kidney cysts achieved high diagnostic yield in a selected cohort and identified diverse causes beyond major autosomal dominant polycystic kidney disease/autosomal recessive polycystic kidney disease genes, supporting early evaluation to improve diagnostic accuracy, inform prognosis, and guide management, even in the absence of family history.
Advances in Dialysis Technology, Artificial Intelligence, and the Future of Kidney Replacement Therapy
Cheungpasitporn, Wisit, Behera, Suman , Cheungpasitporn, Wisit

Kidney News | March 6, 2026 | Volume: 18 | Issue: 3 | Pages: 15

10.62716/kn.002802025 Get It

Technology-Guided Dry-Weight Management in Dialysis: Current Evidence and the Road Ahead
Pesce, Francesco, Wathanavasin, Wannasit , Pesce, Francesco , Thongprayoon, Charat

Kidney News | March 6, 2026 | Volume: 18 | Issue: 3 | Pages: 17-18

10.62716/kn.002592025 Get It

Very High vs. High Tumor Mutational Burden Across Tumors: Real-World Associations with MSI, Pathway Features, and Immunotherapy Outcomes
Teixeira, Maria Fernanda , Tomaz, Victoria, Silva, Lucas Campos Barbosa e, Donizete, Uelson, Tustumi, Francisco , Nakaya, Helder Imoto , Moura, Fernando, Borad, Mitesh, Junior, P. Serrano Uson, Usón, Pedro Luiz Serrano , Nakaya, Helder I. , Uson, Pedro L S , Tomaz, Victoria, Beal, Juliana Rodrigues , Moura, Fernando , Borad, Mitesh J. , Campregher, Paulo Vidal

Biomedicines | March 6, 2026 | Volume: 14 | Issue: 3 | Pages: 593

10.3390/biomedicines14030593 | PMID 41898240 Get It

Background: Tumor mutational burden (TMB) is an FDA-approved biomarker for immune checkpoint inhibitor (ICI) therapy. However, its predictive value varies among tumor types and molecular contexts. We investigated whether a very high TMB identifies a biologically distinct subset and whether a higher cutoff provides additional clinical insights beyond the conventional high TMB threshold. Methods: We analyzed 133 patients with advanced solid tumors and TMB ≥ 10 mutations/Mb (mut/Mb) who underwent tumor genomic profiling using a 523-gene DNA/RNA next-generation sequencing panel. Tumors were stratified into prespecified TMB categories: 10–20 mut/Mb (TMB-H) and >20 mut/Mb (TMB-VH). The clinical characteristics, ICI outcomes (in the treated subset), and pathway-level genomic features were compared between groups. Results: TMB-VH was observed in 42/133 (31.6%) patients and spanned more than 20 tumor types. MSI was markedly more prevalent in TMB-VH than in TMB-H tumors (38.1% vs. 2.2%; Fisher’s exact p = 8.9 × 10−8). Pathway-level comparisons did not identify statistically significant differences after false discovery rate correction (all q > 0.05), and the observed patterns were descriptive in nature. In the ICI-treated subset with complete follow-up, objective response did not differ according to the TMB group. Overall survival (OS) was also similar between groups, whether measured from metastatic diagnosis (log-rank p = 0.937) or from ICI initiation (log-rank p = 0.814), although OS was numerically longer in the TMB-VH group in both analyses without reaching statistical significance. Conclusions: In this cohort study, TMB-VH was strongly associated with MSI but not independently associated with improved ICI outcomes. Larger multicenter cohorts are needed to validate pathway-oriented patterns and clarify the clinical utility of extreme TMB thresholds across various histologies. Integrating the functional context (e.g., MSI status, gene-level context, and pathway-level features) with TMB magnitude may enable more robust, tumor-aware biomarker models for immunotherapy selection.