Abstract Background: MR fingerprinting (MRF) is a novel imaging method proposed for the diagnosis of Multiple Sclerosis (MS). This study aims to determine if MR Fingerprinting (MRF) relaxometry can differentiate frontal normal appearing white matter (F-NAWM) and splenium in patients diagnosed with MS as compared to controls and to characterize the relaxometry of demyelinating plaques relative to the time of diagnosis.Methods: Three-dimensional (3D) MRF data were acquired on a 3.0T MRI system resulting in isotropic voxels (1x1x1mm3) and a total acquisition time of 4min 38s. Data were collected on 18 subjects paired with 18 controls. Regions of interested were drawn over MRF-derived T1 relaxometry maps encompassing selected MS lesions, F-NAWM and splenium. T1 and T2 relaxometry features from those segmented areas were used to classify MS lesions from F-NAWM and splenium with T-distributed stochastic neighbor embedding algorithms (T-SNE). Partial least squares discriminant analysis (PLS-DA) was performed to discriminate NAWM and Splenium in MS compared with controls. Results: Mean out-of-fold machine learning prediction accuracy for discriminant results between MS patients and controls for F-NAWM was 65% and approached 90% for the splenium. There was significant positive correlation between time since diagnosis and MS lesions mean T2 (p=0.015), minimum T1 (p=0.03) and negative correlation with splenium uniformity (p=0.04). Perfect discrimination (AUC=1) was achieved between selected features from MS lesions and F-NAWM.Conclusions: 3D-MRF has the ability to differentiate between MS and controls based on relaxometry properties from the F-NAWM and splenium. Whole brain coverage allows the assessment of quantitative properties within lesions that provide chronological assessment of the time from MS diagnosis.
TURBINE‐MRE: A 3D hybrid radial‐Cartesian EPI acquisition for MR elastography
Magnetic Resonance in Medicine | August 1, 2020 | Volume: 85 | Issue: 2 | Pages: 945-952
PurposeTo develop a novel magnetic resonance elastography (MRE) acquisition using a hybrid radial EPI readout scheme (TURBINE), and to demonstrate its feasibility to obtain wave images and stiffness maps in a phantom and in vivo brain.MethodThe proposed 3D TURBINE‐MRE is based on a spoiled gradient‐echo MRE sequence with the EPI readout radially rotating about the phase‐encoding axis to sample a full 3D k‐space. A polyvinyl chloride phantom and 6 volunteers were scanned on a compact 3T GE scanner with a 32‐channel head coil at 80 Hz and 60 Hz external vibration, respectively. For comparison, a standard 2D, multislice, spin‐echo (SE) EPI‐MRE acquisition was also performed with the same motion encoding and resolution. The TURBINE‐MRE images were off‐line reconstructed with iterative SENSE algorithm. The regional ROI analysis was performed on the 6 volunteers, and the median stiffness values were compared between SE‐EPI‐MRE and TURBINE‐MRE.ResultsThe 3D wave‐field images and the generated stiffness maps were comparable between TURBINE‐MRE and standard SE‐EPI‐MRE for the phantom and the volunteers. The Bland–Altman plot showed no significant difference in the median regional stiffness values between the two methods. The stiffness measured with the 2 methods had a strong linear relationship with a Pearson correlation coefficient of 0.943.ConclusionWe demonstrated the feasibility of the new TURBINE‐MRE sequence for acquiring the desired 3D wave‐field data and stiffness maps in a phantom and in‐vivo brains. This pilot study encourages further exploration of TURBINE‐MRE for functional MRE, free‐breathing abdominal MRE, and cardiac MRE applications.
In vivo characterization of 3D skull and brain motion during dynamic head vibration using magnetic resonance elastography
Magnetic Resonance in Medicine | May 18, 2018 | Volume: 80 | Issue: 6 | Pages: 2573-2585
PurposeTo introduce newly developed MR elastography (MRE)‐based dual‐saturation imaging and dual‐sensitivity motion encoding schemes to directly measure in vivo skull–brain motion, and to study the skull–brain coupling in volunteers with these approaches.MethodsSix volunteers were scanned with a high‐performance compact 3T‐MRI scanner. The skull–brain MRE images were obtained with a dual‐saturation imaging where the skull and brain motion were acquired with fat‐ and water‐suppression scans, respectively. A dual‐sensitivity motion encoding scheme was applied to estimate the heavily wrapped phase in skull by the simultaneous acquisition of both low‐ and high‐sensitivity phase during a single MRE exam. The low‐sensitivity phase was used to guide unwrapping of the high‐sensitivity phase. The amplitude and temporal phase delay of the rigid‐body motion between the skull and brain was measured, and the skull–brain interface was visualized by slip interface imaging (SII).ResultsBoth skull and brain motion can be successfully acquired and unwrapped. The skull–brain motion analysis demonstrated the motion transmission from the skull to the brain is attenuated in amplitude and delayed. However, this attenuation (%) and delay (rad) were considerably greater with rotation (59 ± 7%, 0.68 ± 0.14 rad) than with translation (92 ± 5%, 0.04 ± 0.02 rad). With SII the skull–brain slip interface was not completely evident, and the slip pattern was spatially heterogeneous.ConclusionThis study provides a framework for acquiring in vivo voxel‐based skull and brain displacement using MRE that can be used to characterize the skull–brain coupling system for understanding of mechanical brain protection mechanisms, which has potential to facilitate risk management for future injury.
Cardiac MR elastography using reduced‐FOV, single‐shot, spin‐echo EPI
Magnetic Resonance in Medicine | December 1, 2017 | Volume: 80 | Issue: 1 | Pages: 231-238