Graff‐Radford, Jonathan

AbstractBackgroundMayo Test DRIVE (MTD): Test Development through Rapid Iteration, Validation and Expansion, is a web‐based multi‐device (smartphone, tablet, personal computer) platform optimized for remote self‐administered cognitive assessment that includes a computer‐adaptive word list memory test (Stricker Learning Span; SLS), a measure of processing speed/executive functioning (Symbols Test) and a score combining both the memory and processing speed/executive functioning measures (MTD Composite). We aimed to determine the reliability of MTD measures across follow‐up sessions.MethodIndividuals participating in this ancillary study who completed at least two and up to four complete MTD sessions were included, resulting in 1,293 participants (mean age = 70.6, SD = 11.6; mean education = 15.6, SD = 2.3; 48.6% male; 96.9% White; 99.1% non‐Hispanic; 97.1% cognitively unimpaired) from parent studies (see Table 1). MTD raw scores were winsorized at 1% and 99% to minimize the impact of outliers. Test‐retest reliability was assessed using single‐rating, absolute‐agreement, and two‐way mixed ICCs and results are described using descriptives from Koo et al. (2016). ICCs for in‐person‐administered traditional neuropsychological measures are also reported alongside MTD for a subset of participants newly enrolled into the MCSA (to ensure participants were test naïve to both MTD and in‐person tests).ResultReliability was good for the MTD Composite raw [total ICC = 0.78; see Table 2 for session‐to‐session ICCs and 95% CIs], and moderate‐to‐good for the primary outcome variables for each subtest [total ICC = 0.74 for both SLS and Symbols]. Weighting by accuracy negatively impacted reliability of Symbols and the Composite; without this weighting, MTD Composite and Symbols variables showed higher reliability (MTD Composite z total ICC = 0.80; Symbols response time total ICC = 0.84; see Table 2). Alternative methods of defining response time on Symbols showed nearly identical reliability values. SLS sum of trials (primary variable) had subtly higher reliability than separate measures of learning (1‐5 correct, max span) or delay. Reliability of remote MTD and in‐person‐administered measures and select comparisons are provided in Table 3.ConclusionMTD showed moderate to good reliability, similar to in‐person‐administered traditional neuropsychological tests. Future work will examine the effect of demographics, device type, and session interference on reliability.

AbstractBackgroundThe NIA Health Disparities Research (NIA‐HD) Framework organizes factors in four domains (i.e., environmental, sociocultural, behavioral, and biological), which work together over the lifetime to influence health and health disparities.MethodIn previous work, we employed a 2‐stage approach using factor and principal component (PC) analyses to identify patterns of factors in the domains of the NIA‐HD Framework. We found three PCs that identified related groupings from more than one NIA‐HD domain. PC1: retirement status, residence type, multivitamin use, heart disease, Charlson comorbidity index, walking/balance difficulties, and Beck Depression Inventory (BDI)‐II questions – mainly from the somatic dimension; PC2: physical activity/exercise, social and group activities, education, occupation, cardiometabolic risk factors, and self‐rated health; PC3: national and state area deprivation index ranking and BDI‐II questions – mainly in the cognitive dimension. Age and sex‐adjusted linear regression models were used to assess the cross‐sectional association of each PC with AD‐plasma biomarkers measured using the Quanterix Simoa platform in the Mayo Clinic Study of Aging (MCSA) participants. AD‐plasma biomarkers included Aβ 42/40, phosphorylated‐tau 181 (p‐tau181), plasma glial fibrillary acidic protein (GFAP), and neurofilament light chain (NfL). All analyses were considered statistically significant at a p <0.05.ResultThere were 1300 cognitively unimpaired participants, 50 years old or older, with available plasma biomarkers (mean age (SD) 68.6 (9.5) years; 49.1% were female) at the current study baseline. PC1 and PC3 were associated with higher NfL and p‐tau 181 values (p<0.05). PC1 and PC2 were associated with higher GFAP values (p<0.05). No PCs were associated with the Aβ 42/40 ratio. Findings were mostly similar after additionally adjusting for global cognitive performance and chronic kidney disease.ConclusionWe found that patterns in a wide range of environmental, sociocultural, behavioral, and biological factors were associated with AD plasma biomarkers. Longitudinal studies are warranted to validate findings and support multi‐faceted approaches to address health disparities and achieve disease delay and prevention.

AbstractBackgroundImaging and plasma markers are used as key indicators of disease for Alzheimer’s disease (AD) but their usefulness in predicting regional tau pathology is relatively understudied. Our objective was to construct predictive models for regional tau pathology measured on postmortem brain tissue using multiple ante‐mortem AD biomarkers. We focused on hippocampal and parietal regions that were immunostained with AT8 and 2E9 that reflect early and advanced aspects of tangle maturity, respectively.MethodsUsing autopsy data from 63 participants enrolled in the Mayo Clinic Study of Aging (MCSA) where the last clinical visit is within three years of death, we analyzed three ante‐mortem plasma markers ‐ phosphorylated tau protein at the threonine 181 residue, glial fibrillary acidic protein, total β‐amyloid Aβ42 relative to Aβ40 ratio (Quanterix Simoa HD‐X Analyzer), and three regional MRI markers computed using SPM12 ‐ parietal thickness, parietal volume relative to total intracranial volume ratio, and hippocampal volume adjusted for total intracranial volume. Based on eight separate cross‐sectional linear regression models weighted by the inverse of time from last visit to death, we estimated the multiple and partial R2 predicting post‐mortem pathology measures, including AT8 and 2E9 in both the hippocampal and parietal regions. All models were adjusted for age, sex, and cardiovascular and metabolic conditions score.ResultsThe MRI models (R2 of 0.26‐0.53) had greater predictive power compared to the plasma models (R2 of 0.17‐0.26). The best multiple R2 was 0.53 for prediction of hippocampal AT8 using antemortem hippocampal volume adjusted for total intracranial volume followed by R2 of 0.43 for prediction of hippocampal 2E9 using hippocampal volume adjusted for total intracranial volume. Though the model prediction of parietal AT8 and 2E9 measurements was low (R2 of 0.21‐0.26), parietal thickness exhibited better predictive performance than parietal volume relative to total intracranial volume ratio.ConclusionsThe data we presented here may be utilized to validate biomarkers using regional pathology. Our results support that regional MRI is sensitive to tau pathology. Newer MRI methods should be tested to examine the specificity of newer quantitative measurements to tau pathology.

AbstractBackgroundThere is increasing need for noninvasive biomarkers of Alzheimer’s Disease (AD) neuropathologic change for early detection and intervention through risk‐factor modification and disease‐modifying therapies. One such biomarker is the prediction of chronological age from routine clinical tests such as an electrocardiogram (EKG) to discriminate between observed biological age from chronological age for healthy aging. Deviation of true age from predicted age has been associated with heart failure, hypertension, and coronary heart disease. However, the association between EKG‐based age and underlying neuropathology has not been studied.MethodWe used a cohort of 336 participants from the Mayo Clinic Study of Aging, a population‐based prospective study of residents in Olmsted County, Minnesota, with antemortem EKG and post‐mortem brain autopsy (Table 1 & 2). Age was predicted from EKG using a validated convolutional neural network algorithm. We used ordinal logistic regression to identify associations between lower neuropathologic scores of AD (Thal phase, neuritic plaque score, Braak stage, and overall AD neuropathologic change) and the Age‐Gap, defined as EKG‐predicted age minus chronological age. Results were controlled for true age, sex, and APOE e4 carrier status. Neuropathologic scales were grouped into none, low, intermediate, and high categories. Observations were weighted by the inverse of years between last EKG and time of death to account for the time difference between acquisition of EKG and autopsy.ResultWe found that an increasing Age‐Gap (i.e. older predicted age) was inversely associated with lower overall AD neuropathologic change (OR 0.93 [0.89, 0.97], p = 0.002). Investigation of the components of AD neuropathologic change showed that an increasing Age‐Gap was also inversely associated with lower amyloid metrics such as Thal phase (OR 0.85 [0.80, 0.89], p < 0.001) and neuritic plaque scores (OR 0.91 [0.87, 0.96], p < 0.001), but not tau metrics like Braak staging (OR 1.05 [1.00, 1.10], p = 0.05).ConclusionIn this work, we show that older predicted age on EKG, a noninvasive biomarker associated with vascular and biological aging, is associated with higher amyloid burden and neuropathologic change of AD.

AbstractBackgroundThere is a strong link between tau and progression of Alzheimer’s disease (AD), necessitating an understanding of tau spreading mechanisms. Prior research, predominantly in typical AD, suggested that tau propagates from epicenters (regions with earliest tau) to functionally connected regions. However, given the constrained spatial heterogeneity of tau in typical AD, validating this connectivity‐based tau spreading model in AD variants with distinct tau deposition patterns is crucial.MethodWe included 269 amyloid‐β‐positive (PET/CSF) individuals with clinically diagnosed atypical AD (113 posterior cortical atrophy, PCA‐AD; 83 logopenic variant primary progressive aphasia, lvPPA‐AD; 33 behavioural variant AD, bvAD; 40 corticobasal syndrome, CBS‐AD) and 68 with typical AD from 12 international cohorts, who underwent tau‐PET (54% [18F]AV1451/[18F]flortaucipir/Tauvid, 27% [18F]MK6240, 19% [18F]PI2620). Using Gaussian mixture modeling including amyloid‐β‐negative controls, cross‐sectional tau‐PET standardized uptake value ratios within Schaefer‐200 atlas regions were transformed to tau positivity probabilities. Tau epicenters were defined as the 5% regions with highest tau positivity probabilities. For each variant, the association between functional connectivity‐based distance (using the 30% strongest positive region‐to‐region connections of a group‐average connectivity matrix from ADNI elderly controls) and tau‐PET covariance (group‐average correlation per region pair) was assessed through linear regression, adjusting for age, sex, site, and Euclidean distance. Regions were categorized based on functional proximity to the epicenter (quartiles 1‐4) and tau positivity probabilities were assessed accordingly.ResultTau positivity probabilities matched clinical variants, with a posterior pattern in PCA‐AD, left‐hemispheric dominant pattern in lvPPA‐AD, widespread pattern in bvAD, sensorimotor cortex involvement in CBS‐AD, and temporo‐parietal predominance in typical AD (Figure 1). In line with this, tau epicenters were highly heterogeneous across variants (Figure 1). In all variants, greater tau‐PET covariance was associated with shorter functional connectivity‐based distance (Figure 2). We observed that regions in closer functional proximity to the epicenter exhibited higher tau positivity probabilities than regions functionally further away (p<0.05, Figure 3).ConclusionThis multi‐center study shows that the brain’s functional architecture serves as a universal predictor of tau spreading in AD. Since tau is a key driver of neurodegeneration and cognitive decline in AD, this finding holds potential for personalized medicine and defining participant‐specific endpoints in clinical trials.

AbstractBackgroundMany proposed clinical decision support systems (CDSS) require multiple disparate data elements as input, which makes implementation difficult, and furthermore have a black‐box nature leading to low interpretability. Fluorodeoxyglucose Positron Emission Tomography (FDG‐PET) is an established modality for the diagnosis of dementia, and a CDSS that uses only an FDG‐PET image to produce a reliable and understandable result would ease both of these challenges to clinical application.MethodA deep variational autoencoder (VAE) was used to extract a latent representation of each image through prior training from FDG‐PET brain images (n=2000). This unsupervised VAE has a novel graph convolutional architecture that makes it applicable to masked template space images. A logistic regression model was used to classify each image. A parametric study of the latent space revealed the imaging features that were used in the logistic regression model to differentiate each class. A separate dataset of participants labeled with their clinical diagnosis (n=1239) was used to assess the logistic regression model’s diagnostic accuracy of cognitively unimpaired (CU) (n=679) and between common dementia subtypes: Alzheimer’s disease (AD) (n=310), Lewy body dementia (DLB) (n=151), and behavioral variant frontotemporal dementia (bvFTD) (n=99). The logistic regression classifier was evaluated using receiver‐operator characteristic (ROC‐AUC) curves.ResultROC‐AUC curves for CU and each dementia subtype are illustrated in Figure 1a. A k nearest neighbors model was used to develop a graphical representation of the latent space where nodes are images and edges are drawn between nearest neighbors, illustrated in Figure 1b. The graph of the latent space demonstrates a comparison between dementia subtypes and CU images.ConclusionIn this study, we developed a proof‐of‐concept VAE that can achieve differential diagnosis with 84.8% balanced accuracy. The model architecture provides visual interpretability, and shows that the hippocampi, parietal lobes, and cerebellum, were useful for distinguishing AD, the frontal lobe, posterior cingulate cortex, and hippocampi were useful for distinguishing DLB, and prefrontal pole, subcortical structures, and occipital lobe were useful for distinguishing bvFTD. These regions of metabolism align with clinical pathology and metabolic patterns.

AbstractBackgroundCortical structural changes in the temporal lobes including global and hippocampal volume loss and decrease in cortical thickness are well‐associated findings linked to cognitive decline in MCI and dementia patients. Neurite orientation dispersion and density imaging (NODDI) is a multishell diffusion MRI method enabling assessment of tissue microstructural integrity at the axonal and dendritic level. We wished to determine whether changes in temporal cortex orientation dispersion index (ODI) & neurite density index (NDI) correlate with decreases in memory function.MethodThe MCALT_ADIR122 cortical atlas was used for ROI designation. NODDI imaging was obtained on a 3T Siemens Prisma scanner with 2 mm isotropic resolution. Participants (ages 60‐95 years) were cognitively unimpaired (CU) or had mild cognitive impairment (MCI). CU & MCI subjects were enrolled in the Mayo Clinic Study of Aging (MCSA) and underwent neuropsychological testing including 3 memory tests from which a composite memory z score was calculated. A generalized additive regression model was used to estimate z scores as a smooth function of ODI, NDI and cortical thickness or volume with adjustment for age, gender, education, MCSA cycle number, WMH and intracranial volume.ResultThe Table displays demographic data. Figures 1 and 2 show the relationship of NDI and ODI measures to memory z scores across participants in individual ROIs both before and after adjustment for cortical thickness (“structural MRI”) as well as for confounds listed above. Both higher cortical thickness and higher NDI values in the hippocampus and entorhinal cortex were associated with significantly higher memory z‐scores (p<0.001) (Figure 1). Higher ODI values in addition to greater cortical thickness in temporal lobe regions, including within the hippocampus, parahippocampal gyrus, entorhinal cortex and inferior temporal gyrus, were associated with higher memory z‐scores (Figure 2). These significant associations (p <=0.01) were maintained after adjusting for cortical thickness in all these regions except entorhinal cortex for ODI.ConclusionNODDI‐derived measures of microstructural integrity (NDI & ODI) within the temporal cortex may provide information about memory decline, beyond what cortical thickness analysis provides, and may be potentially useful for monitoring therapeutic effects of AD immunotherapy in the future.

AbstractBackgroundResearch subjects can potentially be re‐identified from de‐identified MRI, CT, and PET brain scans with up to 98% accuracy using Microsoft Azure’s cloud‐based commercial facial recognition software. This showed the need to “de‐face” publicly shared research brain scans. Subsequently, Microsoft has begun restricting its face recognition services, intending to prevent misuse. This study tests a variety of popular open‐source computer vision and facial recognition software packages to measure the re‐identification risk with only unrestricted free software.MethodThis study used brain MRI from Siemens 3T scanners and face photographs from 182 participants (ages 30‐90+) in the Mayo Clinic Study of Aging. Each participant had photos taken with an iPad, which were cropped loosely around the head and converted to black and white. A total of 81 renders (2D reconstruction images; Figure 1) were made from each 3D T2‐FLAIR MRI, simulating various camera and lighting positions. These face renders approximate black and white photos, allowing use with software packages developed for matching faces/features between photographs.Open‐source Python packages (OpenCV, DeepFace, face_recognition, scikit‐learn) and their included pre‐trained models (designed for photographs) were used to match participant photographs to the labelled library of MRI‐based face renders. A correct match was recorded when the top‐scoring render or set of renders automatically chosen by the algorithm was from the MRI of the correct participant.ResultFeature matching with ORB and SWIFT (both from OpenCV) produced no correct matches, despite a prior publication reporting moderate success. The best match rates (Figure 2) were 58‐59% accuracy using face_recognition or DeepFace packages with support vector machines (SVMs). Without SVMs, these packages performed modestly worse (51%‐55%).ConclusionWhile the highest match rates obtained by widely available open‐source packages (roughly 60%) are much lower than those of a limited‐access commercial product (Microsoft Azure, with 98%), they show that actors with only access to no‐cost readily available software could still re‐identify a research subject from a brain scan most of the time. This further highlights the need for image refacing software, such as mri_reface, to protect the privacy and identifies of research volunteers.

AbstractBackgroundPlasma Aβ42/40 and p‐tau217 can predict amyloid positivity in cross‐sectional studies. However, it is unclear how plasma biomarkers perform longitudinally, which is important to inform their utility in tracking disease progression. The goal of this study is to describe temporal evolutions of plasma Aβ42/40 and ptau217 ratio (p‐tau217r) measured via mass spectrometry, p‐tau217 measured via an immunoassay, and amyloid PET.MethodsWe included participants in the Mayo Clinic Study of Aging with amyloid PET (PiB) and plasma Aβ42/40 + ptau217r (mass spectrometry, C2N) and/or p‐tau217 (Lilly, MSD). We fit a joint non‐linear mixed effects model with Aβ42/40, p‐tau217r, p‐tau217 (Lilly), and amyloid PET as outcomes and age, sex, APOE ε4 carriership and education as covariates. The model included a per‐participant adjustment (time‐shift) for each biomarker indicating how much earlier or later in time the biomarker was estimated to progress relative to the average participant, a correlation (R) between adjustments for each pair of biomarkers, and the impact of covariates on each biomarker’s timing.ResultsThe study included 1459 participants, age 77 (10) years, 44% female, 82% cognitively unimpaired. Mean (SD) years of followup was 5.6(3.0) years for mass spectrometry plasma measures, 2.5(0.7) years for p‐tau217 (Lilly), and 4.6(3.3) for amyloid PET. Model fits are shown for each biomarker, with greater variability in serial measurements for plasma than PET (Figure 1). Individual adjustments between each of the plasma biomarkers and amyloid PET were highly correlated: p‐tau217r, R=0.73 (95%CI: 0.67, 0.78); p‐tau217 (Lilly), R=0.66 (0.62, 0.7); Aβ42/40, R=0.6 (0.52, 0.68) (Figure 2). The p‐tau217r and Aβ42/40 individual adjustments were modestly correlated, R=0.39 (0.28, 0.49). APOE ε4 carriership had the strongest covariate effect on all biomarkers, e.g. p‐tau217r progression 9.4 (6.7, 12) years earlier (Figure 3).ConclusionsPlasma Aβ42/40 and p‐tau217 measured with currently available assays may both be amenable to longitudinal modeling, although the degree of variability in Aβ42/40 over time may pose challenges. Findings suggest that both plasma Aβ42/40 and p‐tau217r may provide information regarding an individual’s timing of progression on amyloid PET; lower correlations with each other than amyloid PET suggests that each analyte may provide complimentary information.

AbstractBackgroundQuantifying white matter using diffusion MRI (dMRI) has been proposed for measuring early microstructural tissue changes due to cerebral small vessel disease and aid in quantifying vascular contributions to cognitive impairment and dementia (VCID). Our goal was to compare the usefulness of longitudinal white matter changes in the commonly available diffusion MRI measures for VCID prevention trials.MethodWe included 718 participants over 50 years of age (mean age: 71.1(9.6) years) from the Mayo Clinic Study of Aging, a population‐based sample, with at least two dMRI scans and structural imaging. We computed the commonly available single‐shell dMRI measures (fractional anisotropy, mean diffusivity, and two MarkVCID measures ‐ free water and peak‐width skeletonized mean diffusivity [PSMD]) at each time point. We tested for voxel‐wise associations between dMRI markers and vascular risk measured by cardiovascular metabolic condition (CMC) and observed a region‐specific dependance across all dMRI measures. Using both global and regional dMRI measures, we (i) examined the longitudinal association of dMRI measures with cognition and (ii) computed sample size estimates for a hypothetical clinical trial. We also included white matter hyperintensities (WMH) and our previously proposed composite vascular white matter score (combination of WMH and fractional anisotropy of the genu) as a comparison.ResultVascular risk was associated with all single shell dMRI measures in the genu of the corpus callosum, which we included as a regional dMRI marker for comparison (Figure 1). All dMRI markers correlated with cognitive performance longitudinally (Table 1) and had comparable sample size estimates required for hypothetical VCID clinical trials (Figure 2). Further, global free water and the composite vascular white matter score had the smallest sample size estimates.ConclusionAll commonly used dMRI markers had significant frontal lobe changes due to vascular risk. Both global and regional corpus callosum dMRI markers were sensitive to longitudinal cognitive decline, suggesting their utility in measuring the slowing down of VCID. The composite vascular white matter score, global free water, and WMH show promise as VCID biomarkers. Further work is needed to validate these markers on multiple populations.