Allogeneic stem cell transplantation in chronic myelomonocytic leukemia: Analysis of post-transplant survival and risk factors in 138 Mayo Clinic patients.
Journal of Clinical Oncology | May 28, 2025 | Volume: 43 | Issue: 16_suppl | Pages: 6558-6558
6558 Background: Allogeneic stem cell transplantation (ASCT) is currently the only curative therapy in chronic myelomonocytic leukemia (CMML). Methods: A Mayo Clinic enterprise-wide database search identified 138 CMML cases who underwent ASCT. Conventional statistical methods were used for analyses. Results: 138 CMML patients (transplanted between 1995-2024) were included (median age 63 years; males 62%);104 (group A) received ASCT before and 34 (group B) after blast transformation (BT). At initial diagnosis, CMML-1/CMML-2 and dysplastic/proliferative representations were 78%/22% and 54%/46%; 31% displayed abnormal karyotype and most frequent mutations were ASXL1 (56%), TET2 (44%) and SRSF2 (38%). At time of initial diagnosis, CPSS-Mol risk categories were low (17%), intermediate-1 (11%), intermediate-2 (40%), and high (32%). Median time from diagnosis to ASCT was 11 months (range 0-201). Median overall survival (OS) from the time of initial diagnosis was 67 months (range 4-239) and from the time of ASCT 54 (range 0-212) months. Occurrence of BT before ASCT was associated lower post-transplant survival (PTS; 16 vs 95 months, P=0.01, HR 1.9, 95%CI 1.2-3.2). Bone marrow (BM) blasts, at the time of ASCT, <5%, 5-9%, and 10-19% correlated with median OS of 171, 81, and 18 months in group A (p=0.01) and 50, 25, and 13 months in group B (P=0.07), respectively. Pre-ASCT hypomethylating agent exposure was associated with lower PTS in group A (P=0.02). PTS was also adversely affected by DNMT3A and SETBP1 mutations. In group A, PTS was the longest with myeloablative busulfan-based (median not reached) and the shortest (median 22 months) with Cy-TBI-based conditioning (p=0.1). Donor type did not impact PTS: matched unrelated (63%), matched sibling (23%), mismatched unrelated (7%), or haplo-identical (7%). Post-transplant cyclophosphamide was associated with a numerically lower median PTS (22 months), compared to other forms of GVHD prophylaxis (107 months; p=0.1) and significantly higher non-relapse mortality (p=0.02). Documentation of morphologic CR at day 100 was associated with significantly longer PTS in both groups A (92%,164 vs. 18 months; p=0.01) and B (84%, 42 vs. 11 months; p=0.01). The presence of abnormal karyotype at day 100 was associated with shorter PTS in group A (p=0.01). Grade ≥3 acute and moderate to severe chronic GVHD occurred in 20% and 34%, respectively, in group A patients and in 26% and 44% in group B. GRFS at 1/3 years were 42/21% in group A and 31/16% in group B. At last follow up, 44% in group A and 65% in group B were dead. Causes of death were relapse/non-relapse related in 36/64% in group A and 39/61% in group B. Conclusions: ASCT is effective in securing long-term survival in CMML, especially when the procedure is performed prior to BT and in the setting of <5% BM blasts/promonocytes. Response assessment at day 100 was highly informative of outcome.
Ziftomenib in relapsed/refractory (R/R)
NPM1
-mutant acute myeloid leukemia (AML): Phase 1b/2 clinical activity and safety results from the pivotal KOMET-001 study.
Journal of Clinical Oncology | May 28, 2025 | Volume: 43 | Issue: 16_suppl | Pages: 6506-6506
6506 Background: NPM1 -m drives leukemogenesis in ~30% of AML. Despite current risk stratification, nearly half will have R/R disease within a year, after which outcomes are poor with <10% complete response following chemotherapy. Ziftomenib – a potent, highly selective, oral, investigational menin inhibitor – has shown clinical activity as monotherapy and in combination for adults with R/R NPM1 -m and KMT2A -r AML, with 600 mg once-daily (QD) as the recommended phase 2 monotherapy dose for NPM1 -m. Here we present the primary analysis for NPM1 -m patients (pts) treated with ziftomenib 600 mg QD in the pivotal KOMET-001 study. Methods: KOMET-001 (NCT04067336) is a multicenter, open-label phase 1/2 study of ziftomenib in adults with R/R AML. In phase 2, pts with NPM1 -m R/R AML received ziftomenib 600 mg QD. Phase 2 primary endpoint: complete remission with full/partial hematologic recovery (CR/CRh); key secondary endpoints: composite complete remission (CRc), durations of CR/CRh and CRc, and safety. The analyses below include NPM1 -m pts pooled from phase 1b/2. Results: The phase 2 primary endpoint was met ( p =0.0058). As of 20 Dec 2024, 112 pts were enrolled (51% US/Canada, 49% Europe/UK) in phase 1b/2 and treated with ziftomenib 600 mg QD, with a median follow-up of 4.2 months. Median age was 69 yrs (range 22–86), 56% female, 83% ECOG PS 0–1, median of 2 prior therapies (range 1–7), including 60% prior venetoclax (VEN) and 23% prior transplant. CR/CRh rate in all phase 1b/2 pts was 25% (28/112; 95% CI 17–34) and overall response rate was 35% (39/112; 95% CI 26–44). In phase 2 pts, 23% (21/92; 95% CI 15–33) achieved CR/CRh (Table), with 67% (10/15) MRD negativity among CR/CRh responders tested (local). Comparable CR/CRh rates were observed in both VEN-naïve and exposed pts (21% vs. 24%). Ziftomenib was well tolerated with 3% (3/112) discontinuing due to treatment-related adverse events (TRAEs). 40% (45/112) of pts had Grade (Gr) ≥3 TRAEs, including 13% differentiation syndrome (all Gr3), ≤5% each anemia, febrile neutropenia and thrombocytopenia, and 2% QTc prolongation (Gr3). Updated clinical activity and safety data will be presented. Conclusions: In the pivotal KOMET-001, the phase 2 primary endpoint was met: Ziftomenib achieved deep and durable responses in R/R NPM1 -m AML, regardless of prior VEN. Ziftomenib was well tolerated with limited myelosuppression and only 3% ziftomenib-related discontinuations. Taken together, these data support the potential use of ziftomenib monotherapy as a new treatment option for R/R NPM1 -m AML. Clinical trial information: NCT04067336 . Response, n (%) Phase 2600 mg QDN=92 Phase 1b/2600 mg QDN=112 CR 13 (14) 20 (18) CR/CRh 21 (23) 28 (25) CRc 24 (26) 32 (29) Median duration, months (95% CI) CR/CRh 3.7 (1.9–NE) 3.7 (1.9–7.7) CRc 4.6 (2.8–11.4) 5.1 (2.8–8.1) Restricted mean duration, months (95% CI) CR/CRh 4.3 (3.1–5.6) 5.2 (3.6–6.7) CRc 5.9 (4.0–7.7) 6.4 (4.6–8.1)
TP53
multihit mutations in 142 patients with MPN or AML: Comparative analysis of survival and risk factors.
Journal of Clinical Oncology | May 28, 2025 | Volume: 43 | Issue: 16_suppl | Pages: No page available
e18590 Background: TP53 mutations ( TP53 MUT ) are known to be associated with adverse prognosis in acute myeloid leukemia (AML) and multihit TP53 MUT in myelodysplastic syndromes (MDS). The prognostic relevance of multihit TP53 MUT in myeloproliferative neoplasms (MPN) was recently highlighted. The current study illustrates survival comparisons in multihit TP53- mutated MPN vs. AML and analysis of associated risk factors. Methods: A Mayo Clinic enterprise-wide database search identified 61 MPN and 81 AML cases with multihit TP53 MUT . Conventional statistical methods were used for analyses. Results: 142 patients with multihit TP53 MUT were included: i) chronic phase MPN (MPN-CP; N=19), ii) accelerated phase MPN (MPN-AP; N=14), iii) blast phase MPN (MPN-BP; N=28) and iv) AML, not including MPN-BP (N=81). Concomitant ASXL1 MUT , EZH2 MUT , IDH1 MUT and IDH2 MUT were more common in MPN-BP, compared to AML. At a median follow up of 0.6 years, 124 (87%) deaths and 19 (13%) allogeneic stem cell transplantations (ASCT) were documented. Overall survival (OS), calculated from time of TP53 MUT detection was similar between MPN-BP (median 4.6 months) and MPN-AP (5.6 months; p=0.5). OS in MPN-BP/AP (median 4.8 months) was inferior to that of AML (median 7.4 months; p=0.04) while that of MPN-CP (median 11.6 months) was similar to AML (0.07) but superior to that of MPN-BP/AP (p<0.01). Age-adjusted multivariable analysis (MVA) confirmed the independent prognostic significance of undergoing ASCT (HR 0.4, p=0.03), MPN-CP or achieving response to pre-transplant therapy (HR 0.2, p<0.01), and concurrent TET2 MUT or DNMT3A MUT (HR 2.7, p<0.01) on OS. Based on these risk factors, a 3-tiered risk model was constructed: low (no risk factors; N=18; median OS 23.8 months); intermediate (1 risk factor; N=44; median 11.1 months); and high (2 or more risk factors; N=80; median 4 months; p<0.01). Comparative analysis of risk factors among distinct diseases confirmed the prognostic significance of ASCT (HR 0.3, p=0.03), achieving response to pre-transplant therapy (0.4, p<0.01) and concurrent TET2 MUT or DNMT3A MUT (HR 5.0, p<0.01) in AML. In MPN AP/BP, OS was influenced by having received chemotherapy vs. supportive care (HR 0.1; p<0.01) and achieving response to pre-transplant therapy (0.2, p<0.01). No significant risk factors for OS were identified in MPN-CP. In MVA, ASCT did not appear to influence OS in MPN AP/BP (p=0.7) and MPN-CP (p=0.4) but the number of informative cases was too low to make definitive conclusions. Conclusions: The current study highlights the equally detrimental impact of multihit TP53 MUT in securing long-term survival in MPN and AML. Short-term survival was positively influenced by ASCT, at least in AML, and disease stage or remission status at time of mutation detection and ASCT, respectively.
Heterogeneity in outcomes of TP53‐mutated myeloproliferative neoplasms based on disease phenotype and mutational status
British Journal of Haematology | May 22, 2025 | Volume: 207 | Issue: 2 | Pages: 683-686
Background/Objectives: DDX41, DEAD-box RNA helicase 41 gene located on chromosome 5q25.3, is one of the most mutated genes in patients with germline predisposition to myeloid neoplasms. Germline and somatic mutations often have different locations and patterns of mutation, with some hotspots displaying diversity based on ethnicity. We aimed to explore clinical outcomes in patients with various DDX41 hot-spot mutations. Methods: This was a retrospective study of patients at Mayo Clinic with DDX41 mutation identified through Next Generation Sequencing (NGS) between 2018 and 2024. We completed unadjusted comparisons using continuous or categorical variables, and survival rates were assessed using the Kaplan–Meier method and cox regression analysis. Results: Overall survival appears to be higher in those with p.M1| when compared to p.Asp140GlyFs*2 and p.Arg525His, with comparable survival between p.Arg525His and p.Asp140GlyFs*2. Among males with p.M1| who underwent bone marrow transplant, those who underwent bone marrow transplant appeared to have lower survival rates, although not statistically significant. Our study was limited by a small sample size, therefore limiting our ability to reach significance. Conclusions: Our findings suggest potential implications for clinical outcomes based on DDX41 mutation hot-spots.
Factors associated with survival after allogeneic transplantation for myeloid neoplasms harboring TP53 mutations
Abstract Allogeneic hematopoietic stem cell transplant (alloHCT) is considered for all patients with myeloid neoplasms (MNs) harboring TP53 mutations (TP53mut). The aim of this international study across 7 transplant centers in the United States and Australia was to identify factors associated with improved post-alloHCT survival. Of 134 TP53mut MN cases who underwent alloHCT, 80% harbored complex karyotype; 94% of TP53 variants were localized to the DNA-binding domain (DBD). Most common comutations were ASXL1 (7%), TET2 (7%), and DNMT3A (6%). Median post-HCT survival was 1.03 years, and overall survival (OS) at 1 year, 2 years, and 3 years was 51.4%, 35.1%, and 25.1%, respectively. A total of 103 cases (76.9%) met the International Consensus Classification (ICC) criteria for MN with mutated TP53 (referred to as ICC-defined TP53mut MN hereafter). The 3-year OS of ICC-defined TP53mut was significantly shorter compared with that of other TP53mut MNs (3-year OS, 16.9% vs 54.9%; P = .002). ICC-defined TP53mut MNs was independently associated with inferior OS (hazard ratio [HR], 2.62; P = .019). The presence of non-DBD TP53mut only (HR, 3.40; P = .005), DNMT3A comutation (HR, 2.64; P = .016), and pre-alloHCT bone marrow blasts ≥5% (HR, 2.76; P = .006) was independently associated with inferior relapse-free survival (RFS), whereas melphalan-based conditioning was associated with superior RFS (HR, 0.52; P = .005). Combining these variables, we constructed a hierarchical model that stratified patients into low-, intermediate-, and high-risk categories with 1-year RFS of 81.3%, 31.3%, and 6.7%, respectively (P < .001). In conclusion, a subset of MN harboring TP53mut who have low blasts pre-alloHCT and received melphalan-based conditioning derived long-term benefit from alloHCT.
Evidence-based risk stratification of myeloid neoplasms harboring
TP53
mutations
Abstract This retrospective analysis aimed to provide evidence-based risk stratification of TP53-mutated (TP53mut) myeloid neoplasms (MNs). Of 580 MNs harboring TP53mut with variant allele frequency (VAF) ≥2%, 219 (37.8%), 194 (33.4%), 92 (15.9%), and 75 (12.9%) were classified as acute myeloid leukemia (AML), myelodysplastic syndrome (MDS) with low blasts (MDS-LB), MDS with excess blasts (MDS-EB)-2, and -EB1 according to the revised fourth edition of the World Health Organization (WHO) classification, respectively. Hierarchical analysis identified the following 4 risk groups with distinct survival: (1) MDS-LB, (2) MDS-EB1/EB2/AML VAF <10%, (3) MDS-EB1/EB2 VAF ≥10%, and (4) AML VAF ≥10%. We next evaluated the impact of allelic status, VAF, and complex karyotype (CK). In our cohort, the significance of biallelic status was limited to MDS with <5% blasts and not for blasts 5% to 9%, as proposed by the International Consensus Classification (ICC), or 5% to 19%, as proposed by the fifth edition of the WHO (WHO-5). MDS-EB1 and -EB2 with VAF ≥10% had comparable survival (9.6 vs 7.2 months; P = .12), regardless of allelic status. Contrary to the ICC proposal, MDS-EB1/EB2 with VAF <10% and CK had poor survival compared with those without CK, comparable to MDS-EB1/EB2 with VAF ≥10% (5.6 vs 26.2 vs 6.3 months; P = .003). Survival of TP53mut AML was poor (median 3.9 months) regardless of allelic/CK status. Thus, using ICC or WHO-5 may underestimate prognosis of MDS with blasts 5% to 19% and 5% to 9%, respectively. Collectively, the hierarchical model acknowledges poor survival of 91.9% TP53mut MDS and AML compared with 36.5% and 80.7% by WHO-5 and ICC, respectively.
Multihit TP53 Mutations in Myeloproliferative Neoplasms and Acute Myeloid Leukemia: Comparative Analysis of Survival and Risk Factors in 142 Informative Cases
American Journal of Hematology | March 13, 2025 | Volume: 100 | Issue: 6 | Pages: 1010-1018
ABSTRACTA total of 142 patients with myeloproliferative neoplasms (MPNs) or acute myeloid leukemia (AML) associated with multihit TP53 mutations (mTP53 MUT) were accessed from the Mayo Clinic database and included (i) chronic phase MPN (MPN‐CP; N = 19), (ii) accelerated phase MPN (MPN‐AP; N = 14), (iii) blast phase MPN (MPN‐BP; N = 28), and (iv) AML (N = 81). Concurrent ASXL1 MUT, EZH2 MUT, IDH1,MUT and IDH2 MUT were more common in MPN‐MUTBP‐mTP53 compared to AML‐mTP53 MUT. At median of 11.6 months follow‐up, 124 (87%) deaths and 19 (13%) allogeneic stem cell transplantations (ASCT) were documented. Overall survival (OS), calculated from the time of mTP53 MUT detection, was similar between MPN‐BP‐mTP53 MUT (median 4.6 months) and MPN‐AP‐mTP53 MUT (5.6 months; p = 0.5) but both were inferior to MPN‐CP‐mTP53 MUT (11.6 months, p < 0.01). OS in MPN‐CP‐mTP53 MUT was similar to that of AML‐mTP53 MUT (median 7.4 months, p = 0.07). In multivariable analysis, OS was favorably affected by ASCT (HR 0.4, p = 0.03) and disease stage (i.e., chronic phase disease) or achieving response to pre‐transplant chemotherapy (HR 0.2, p < 0.01) and unfavorably by the presence of concurrent TET2 MUT or DNMT3A MUT (HR 2.7, p < 0.01). Based on these risk factors, a 3‐tiered risk model was constructed: low (no risk factors; N = 18; median OS 23.8 months); intermediate (one risk factor; N = 44; 11.1 months); and high (two or more risk factors; N = 80; 4 months; p < 0.01). The current study highlights the equally detrimental impact of mTP53 MUT on long‐term survival in MPN and AML and identifies predictors of short‐term survival.
Prevalence of cytopenia(s) and somatic variants in patients with DDX41 mutant germline predisposition syndrome
British Journal of Haematology | March 12, 2025 | Volume: 206 | Issue: 4 | Pages: 1109-1120
SummaryGermline variants in DDX41 (DDX41MT‐germline predisposition syndrome [GPS]) are associated with predisposition to haematological malignancies (HM), including lymphoid and myeloid neoplasms (MN). We retrospectively analysed the clinical and molecular features of 195 patients diagnosed and treated at Mayo Clinic with DDX41MT‐GPS. Patients with germline DDX41 pathogenic variants (42.3%) and variants of unknown significance (VUS, 57.6%) were included. The median age was 68.6 years (16.2–93.4). Ninety‐two per cent were Caucasian, 64.1% were male and 30.8% had a family history of HM. There were 92 distinct germline variants among our cohort, and the most common was p.Met1? (15.9%), followed by p.Asp140Glyfs*2 (9.2%). Clinical diagnoses included asymptomatic carriers (10.2%), clonal cytopenia of undetermined significance (CCUS, 6.1%), myeloproliferative neoplasms (6.7%), myelodysplastic syndrome (40.5%), acute myeloid leukaemia (20.5%), lymphoid neoplasms (9.2%), plasma cell dyscrasias (6.1%) and solid tumours (22.5%). Patients with MN were older (median age 70 vs. 63.5 years) and more likely to be male (M:F ratio 2.3 vs. 1.0) and most patients (78.8%) with MN had a normal karyotype. The most common somatic variants involved DDX41 (34.4%), followed by TET2 (11.2%), DNMT3A (9.6%) and ASXL1 (9.2%). In summary, we have comprehensively described the spectrum of clinical phenotypes within the Mayo Clinic DDX41MT‐GPS cohort.
Academic Community Partnership in Acute Promyelocytic Leukemia and Early Mortality
ImportanceAcute promyelocytic leukemia (APL) is an acute illness that presents with cytopenia, infections, and disseminated intravascular coagulation. Achieving remission has been shown to make a major difference in patient outcomes; however, early death rates in the first month have been as high as 30% due to acute presentation, comorbidities, the rarity of APL, and clinician inexperience.ObjectiveTo develop treatment strategies that would decrease estimated 1-month mortality from 30% to below 15%.Design, Setting, and ParticipantsIn this nonrandomized clinical trial, a treatment algorithm that focused on supportive care was used to prevent early death in patients with APL treated at academic and community health centers between August 2017 and July 2021. Because of the rarity of the disease, expert support was available 24/7 from 7 designated APL experts at 6 participating academic lead centers, and included an additional 293 community centers. When a patient presented with APL, an expert was contacted and a consensus treatment plan was developed using the algorithm and expert suggestions. There were no exclusion criteria and all patients with a confirmed diagnosis of APL regardless of age or comorbid conditions were enrolled. Expert support was provided throughout induction. Initial data analysis was conducted May 2023.Main Outcomes and MeasuresOne-month mortality; additional objectives were to compare outcomes in academic and community centers and assess 1-year and overall survival.ResultsA total of 201 patients were enrolled from 43 centers; 62 at lead centers and 139 from 37 community centers. The median age was 53 years (range, 18-91 years), with 72 patients (35.8%) who were aged 60 years or older; 105 patients (52.2%) were male. Fifty-two patients (26.4%) were diagnosed with high-risk APL. The 1-month mortality rate was 6 deaths of 201 patients (3.0%; 95% CI, 1.1%-6.4%) after adjusting for 1 interim analysis. In a secondary analysis using the Kaplan-Meier method, the 1-month overall survival (OS) rate was 97.0% (95% CI, 93.5%-98.6%) and the 1-year OS rate was 94.5% (95% CI, 90.3%-96.9%).Conclusions and RelevanceIn this nonrandomized clinical trial, use of an algorithm combined with expert support resulted in a dramatic decrease in early death in academic and community centers. Population-wide survival improved in this highly curable disease, which suggests that implementing an accessible support system with APL experts for comanagement is the most logical next step.Trial RegistrationClinicalTrials.gov Identifier: NCT03253848