Citations

Mayo Clinic

Clear

618 citation(s) found for "O'Brien, J F".

Toward understanding toxicity over time (ToxT) in myeloma cooperative group trials: Feasibility of a novel longitudinal adverse event analysis in ECOG-ACRIN E1A06.
Jacobus, Susanna , Novotny, Paul J. , Stewart, A. Keith, Warsame, Rahma , Midathada, Madhu, Singh, Avina A., O’Brien, Timothy E., MacFarlene, Donald, Grinblatt, David L. , Chanan‐Khan, Asher , Thanarajasingam, Gita , Callander, Natalie S. , Fonseca, Rafaël , Rajkumar, S. Vincent , Dueck, Amylou C.

Journal of Clinical Oncology | September 5, 2018 | Volume: 36 | Issue: 15_suppl | Pages: 6580-6580

10.1200/jco.2018.36.15_suppl.6580 Get It

Etiologies and characteristics of refractory status epilepticus cases in different areas of the world: Results from a global audit
Ferlisi, Monica , Hocker, Sara E. , Trinka, Eugen , O’Brien, Terence J. , Cook, Mark , Leitinger, Markus , Newton, Charles R. , Giovannini, Giada , Hocker, Sara, Cook, Mark J , Trinka, Eugen , Shorvon, Simon D.

Epilepsia | August 30, 2018 | Volume: 59 | Issue: S2 | Pages: 100-107

10.1111/epi.14496 | PMID 30159876 Get It

Summary To describe the demographics, etiologies, types of status epilepticus ( SE ), and outcomes in people with refractory and super‐refractory SE from around the world, we prospectively collected cases of refractory SE ( RSE ) treated with continuous intravenous anesthetic drugs in an intensive care unit setting through online questionnaires using “active surveillance.” We collected information about 776 cases of RSE in 50 countries over 4 years. Control of SE was achieved in 74% of the cases. Neurologic outcomes were poor in 41% of patients, and 24% died. Good outcome was associated with younger age and a history of epilepsy. Etiology strongly influenced the outcome. Patients from Asia were younger, more frequently presented with convulsive SE , and were more frequently affected by infectious etiologies when compared with patients from Europe and the Americas. Despite these differences, outcomes were similar in all countries. Demographics of patients with RSE in a global audit are similar to those in prior single center series, providing evidence of generalizability of those studies. Important differences exist among patients with RSE from different regions of the world, but these do not seem to significantly influence patient outcomes.
Abstract 1226: Rare germline variants segregating in chronic lymphocytic leukemia (CLL) families
Clay‐Gilmour, Alyssa , O’Brien, Daniel R. , Achenbach, Sara J., Vachon, Celine M. , Chaffee, Kari G. , Call, Timothy G. , Leis, José F., Kabat, Brian, Vachon, Celine M. , Norman, Aaron D. , Parikh, Sameer A. , Kay, Neil E. , Braggio, Esteban , Cerhan, James R. , Slager, Susan L.

Cancer Research | August 17, 2018 | Volume: 78 | Issue: 13_Supplement | Pages: 1226-1226

10.1158/1538-7445.am2018-1226 Get It

Abstract CLL is a highly heritable cancer with first degree relatives of CLL cases having a 7.5-fold increased CLL risk. Genome-wide association studies (GWAS) and linkage studies have been performed to study inherited predisposition; however a larger proportion of heritability to CLL remains unexplained. Rare coding variants might account for the missing heritability information. Inherited loss of function variants in shelterin complex genes (POT1, ACD, TERF1, TINF2, TERF2, TERF2IP- involved in telomere regulation), CDK1 (critical for cell division) and ATM (tumor suppressor gene) have been found to co-segregate in CLL families and be enriched in CLL cases using exome-wide sequencing data. Our study evaluates rare germline variants from these suspect genes segregating in CLL families who are followed at the Mayo Clinic. Using whole exome sequencing (WES), we sequenced 93 CLL families with at least 2 reported CLL cases consisting of 443 individuals: 160 with CLL, 73 with monoclonal B-cell lymphocytosis (MBL), and 210 relatives. DNA was extracted from buccal cells, coding exons were selectively captured using Agilent 50Mb and SureSelect Human All Exon V4 capture kits; sequencing was performed using Illumina HiSeq 2000. Mayo Clinic's DNASeq pipeline uses Novoalign (initial read alignment), Picard (marking duplicate reads), and the Genome Analysis Toolkit (GATK) for local realignment, recalibration, and variant calling. The variant discovery step leverages GATK's HaplotypeCaller in per sample mode and all of the samples across the cohort are jointly genotyped together. All called variants are evaluated with GATK's Variant Quality Score Recalibration tool and annotated for biological relevance (BIOR). Quality control included removing variants that had <75% call rate across the two capture kits, <8x coverage, or phred score<10, resulting in 317,666 remaining variants. Of these, over 80% of the coding sequence had a median read depth of 23 reads. In our pedigrees, we searched for rare variants within the genes described above. We identified suspect variants with the following criteria: 1) enriched in CLL and MBL samples compared to unaffected samples; 2) multiple affected members with the variant within a family; 3) variants present in all sequenced affecteds within the family; 4) rarely seen in an in-house database of non-cancer controls or 1K Genomes; and 5) predicted to have a functional damaging effect (using SIFT). We identified three novel rare missense variants, defined as functionally deleterious, which each co-segregated within a CLL family. Specifically, these variants from shelterin complex genes; POT1 (rs116916706), TERF2IP (rs138458227), and TERF2 (rs749171225), met the criteria. This study further highlights telomere dysregulation as a key process in CLL development. Investigating rare variants within CLL pedigrees with WES can help identify germline variants impacting predisposition to familial CLL. Citation Format: Alyssa I. Clay-Gilmour, Daniel R. O'Brien, Sara J. Achenbach, Celine M. Vachon, Kari G. Chaffee, Timothy G. Call, Jose F. Leis, Aaron D. Norman, Brian F. Kabat, Sameer A. Parikh, Neil E. Kay, Esteban Braggio, James R. Cerhan, Susan L. Slager. Rare germline variants segregating in chronic lymphocytic leukemia (CLL) families [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2018; 2018 Apr 14-18; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2018;78(13 Suppl):Abstract nr 1226.
The murine dialysis fistula model exhibits a senescence phenotype: pathobiological mechanisms and therapeutic potential
Nath, Karl A. , O’Brien, Daniel R. , Croatt, Anthony J., Grande, Joseph P. , Ackerman, Allan W., Nath, Meryl C. , Kirkland, James L. , Katušić, Zvonimir S. , Yamada, Satsuki , Tchkonia, Tamara, Terzic, André , Tchkonia, Tamar

American Journal of Physiology-Renal Physiology | July 18, 2018 | Volume: 315 | Issue: 5 | Pages: F1493-F1499

10.1152/ajprenal.00308.2018 | PMID 30019935 Get It

There is no therapy that promotes maturation and functionality of a dialysis arteriovenous fistula (AVF). The search for such therapies largely relies on evaluation of vascular responses and putative therapies in experimental AVFs. We studied an AVF in mice with chronic kidney disease (CKD). We demonstrate numerous stressors in the vein of the AVF-CKD group, including pathological shear, mitogenic, inflammatory, and hypoxia-reoxygenation stress. Because stress promotes premature senescence, we examined whether senescence is induced in the vein of the AVF-CKD model. We demonstrate a senescence phenotype in the AVF-CKD model, as indicated by increased expression of p16Ink4a, p21Cip1, and p53 and expected changes for certain senescence-associated microRNAs. RNA-sequencing analysis demonstrated differential expression of ~10,000 genes, including upregulation of proinflammatory and proliferative genes, in the vein of the AVF-CKD group. The vein in the AVF-CKD group exhibited telomere erosion and increased senescence-associated β-galactosidase activity and staining. Senescence was induced in the artery of the AVF-CKD group and in the vein of the AVF without CKD. Finally, given the rapidly rising clinical interest in senolytics, we provide proof of concept of senolytics as a therapeutic approach by demonstrating that senolytics decrease p16Ink4a expression in the AVF-CKD model. This study introduces a novel concept underlying the basis for maturational and functional failure in human dialysis AVFs and identifies a new target for senolytic therapy.
Therapeutic Strategies Following Major, Clinically Relevant Nonmajor, and Nuisance Bleeding in Atrial Fibrillation: Findings From ORBIT‐AF
O’Brien, Emily C. , Holmes, DaJuanicia N. , Thomas, Laine , Kowey, Peter R. , Ansell, Jack , Piccini, Jonathan P. , Fonarow, Gregg C. , Mahaffey, Kenneth W. , Gersh, Bernard J. , Peterson, Eric D. , Hylek, Elaine M.

Journal of the American Heart Association | June 9, 2018 | Volume: 7 | Issue: 12 | Pages: No page available

10.1161/jaha.117.006391 | PMID 29886422 Get It

Background Oral anticoagulation ( OAC ) reduces stroke risk in atrial fibrillation, but bleeding is a frequent side effect. The decision to discontinue or modify medication regimens in response to a bleeding event may differ according to bleeding site and severity. Methods and Results We used data from a large, national outpatient registry, ORBIT ‐ AF (Outcomes Registry for Better Informed Treatment of Atrial Fibrillation; 2010–2011), to evaluate event characteristics and OAC management following the first bleeding event occurring during follow‐up. Bleeding events were classified into 3 categories: (1) International Society of Thrombosis and Hemostasis major bleeding, (2) clinically relevant nonmajor bleeding requiring medical attention, and (3) nuisance bleeding not requiring medical attention (eg, bruising, hemorrhoidal bleeding). Of 9743 patients enrolled in ORBIT ‐ AF with follow‐up data, 510 (3.23/100 subject‐years) experienced a major bleed, 615 (3.90/100 subject‐years), experienced a clinically relevant nonmajor bleed, and 1558 (9.87/100 subject‐years) experienced a nuisance bleed, among first bleeds over 2 years. Nearly one third of patients (31.6%) discontinued OAC therapy following a major bleeding event, 12.7% following a clinically relevant nonmajor bleed, and 4.5% following a nuisance bleed. Compared with those who experienced a clinically relevant nonmajor or nuisance bleed, patients who experienced a major bleed were more likely to be black and female and to have a history of heart failure and stroke. Those who discontinued were more likely to have central nervous system or gastrointestinal bleeding than those who persisted on OAC therapy. Conclusions Overall, 1 in 3 patients who experienced a major bleed was no longer anticoagulated after the event. Those who discontinued OAC were more likely to have central nervous system or gastrointestinal bleeding than those who persisted on OAC .
Skull Base Dural Thickness and Relationship to Demographic Features: A Postmortem Study and Literature Review
Fam, Maged D, Potash, Andrea E., Potash, Martin, Robinson, Robert A. , Karnell, Lucy Hynds, O’Brien, Erin K. , Greenlee, Jeremy D.W. , O'Brien, Erin, O'Brien, Erin K , Greenlee, Jeremy D W

Journal of Neurological Surgery Part B: Skull Base | June 5, 2018 | Volume: 79 | Issue: 06 | Pages: 614-620

10.1055/s-0038-1651501 | PMID 30456033 Get It

Abstract Dural membrane is an important anatomic structure that surrounds and protects the entire central nervous system. Physical properties of the dura have many pathophysiological and therapeutic implications in cranial surgery, especially skull base disorders. The aim of this study is to investigate variation in skull base dural thickness and correlation with different demographic parameters. At the time of autopsy, the petrous apex dura with the underlying bone of 20 cadavers was harvested. Dural thickness was independently measured by two pathologists at the thinnest and thickest segments in the specimen. Correlational analyses were then performed to compare dural thickness with gender, age, neck circumference, height, weight, and body mass index (BMI). Mean, minimum, and maximum skull base dural thickness in our study was 0.36, 0.27, and 0.46 mm, respectively. Age demonstrated a negative correlation with dural thickness with significantly thinner dura in the older subjects, p = 0.01. There was a trend toward thinner dura in females that approached statistical significance, p = 0.06. No strong correlation could be found with body weight, height, neck circumference, or BMI. Our findings show a considerable intersubject and intrasubject variability in skull base dural thickness. Some demographic parameters also seem to impact dural thickness. Additional histological studies are needed for better understanding of the pathophysiological mechanisms pertaining to the tensile properties of the dural membrane.
Prognostic Significance of Nuisance Bleeding in Anticoagulated Patients With Atrial Fibrillation
O’Brien, Emily C. , Holmes, DaJuanicia N. , Thomas, Laine , Kowey, Peter R. , Singer, Daniel E. , Ezekowitz, Michael D. , Ansell, Jack , Go, Alan S. , Reiffel, James A. , Piccini, Jonathan P. , Fonarow, Gregg C. , Allen, Larry A. , Gersh, Bernard J. , Naccarelli, Gerald V. , Chan, Paul S. , Mahaffey, Kenneth W. , Freeman, James V. , Peterson, Eric D. , Hylek, Elaine M.

Circulation | April 20, 2018 | Volume: 138 | Issue: 9 | Pages: 889-897

10.1161/circulationaha.117.031354 | PMID 29678813 Get It

Background: Bleeding is commonly cited as a reason for stopping oral anticoagulants (OACs). Whether minor bleeding events (nuisance bleeding, NB) in patients with atrial fibrillation on OACs are associated with OAC discontinuation, major bleeding, and stroke/systemic embolism (SSE) is unknown. Methods: Within the ORBIT-AF prospective, outpatient registry (Outcomes Registry for Better Informed Treatment of Atrial Fibrillation), we identified 6771 patients ≥18 years of age at 172 sites with atrial fibrillation and eligible follow-up visits. NB was ascertained from the medical record and was defined as minor bleeding that did not require medical attention (eg, bruising, hemorrhoidal bleeding). We used multivariable pooled logistic regression modeling to evaluate the associations between NB and major bleeding and SSE in the 180 days after documentation of NB. Our unit of analysis was the patient visit, occurring at ≈6-month intervals for a median of 1.5 years following enrollment. Changes in anticoagulation treatment satisfaction after NB were examined descriptively in a subset of patients. Results: The median age of the overall population was 75.0 (interquartile range, 67.0–81.0); 90.0% were white and 42.5% were female. Among 6771 patients (18 560 visits), n=1357 (20.0%) had documented NB, for an incidence rate of 14.8 events per 100 person-years. Over 96.4% of patients remained on OAC therapy after the NB event. Overall, 287 (4.3%) patients experienced major bleeding and 64 (0.96%) had a SSE event during follow-up. NB was not associated with a significant increased risk of major bleeding over 6 months in models adjusting for the ATRIA bleeding score (Anticoagulation and Risk Factors in Atrial Fibrillation) (odds ratio, 1.04; 95% confidence interval, 0.68–1.60; P =0.86). NB was also not associated with increased SSE risk over 6 months in models adjusting for the CHA 2 DS 2 -VASc risk score (odds ratio, 1.24; 95% confidence interval, 0.53–2.91; P =0.62). Conclusions: NB is common among patients with atrial fibrillation on OACs. However, NB was not associated with a higher risk of major bleeding or SSE over the next 6 months, suggesting its occurrence should not lead to changes in anticoagulation treatment strategies in OAC-treated patients. Clinical Trial Registration: URL: https://www.clinicaltrials.gov . Unique identifier: NCT01165710.
Glycine Amidinotransferase (GATM), Renal Fanconi Syndrome, and Kidney Failure
Reichold, Markus, Klootwijk, Enriko, Reinders, Jörg , Milani, Mario , Broeker, Carsten, Laing, Chris, Wiesner, J., Devi, Sulochana, Zhou, Weibin , Schmitt, Roland , Tegtmeier, Ines , Sterner, Christina, Doellerer, Hannes, Renner, Kathrin , Oefner, Peter J. , Dettmer, Katja , Simbuerger, Johann M.B., Stanescu, Horia , Dumitriu, Simona, Patel, Vaksha , Mozere, Monika, Tekman, Mehmet , Jaureguiberry, Graciana, Issler, Naomi, Kesselheim, Anne, Walsh, Stephen B. , Gale, Daniel P. , Howie, Alexander J. , Martins, Joana Raquel , Hall, Andrew M. , Kasgharian, Michael, O’Brien, Kevin , Jain, Mahim , Hammers, Alexander , Charles‐Edwards, Geoff , Choe, Chi‐un , Isbrandt, Dirk , Cebrian-Serrano, Alberto , Sandford, Richard , Konecki, David, Povey, Sue, Lichter‐Konecki, Uta , Gahl, William A. , Warth, Richard , Kleta, Robert , Gale, Daniel P , Davies, Ben , Bockenhauer, Detlef , Warth, Richard , Kleta, Robert , Otto, Edgar A. , Witzgall, Ralph , Iancu, Daniela , Ferreira, Carlos R , Atwal, Paldeep S , Pugh, Christopher William , Unwin, Robert John

Journal of the American Society of Nephrology | April 13, 2018 | Volume: 29 | Issue: 7 | Pages: 1849-1858

10.1681/asn.2017111179 | PMID 29654216 Get It

Background For many patients with kidney failure, the cause and underlying defect remain unknown. Here, we describe a novel mechanism of a genetic order characterized by renal Fanconi syndrome and kidney failure. Methods We clinically and genetically characterized members of five families with autosomal dominant renal Fanconi syndrome and kidney failure. We performed genome-wide linkage analysis, sequencing, and expression studies in kidney biopsy specimens and renal cells along with knockout mouse studies and evaluations of mitochondrial morphology and function. Structural studies examined the effects of recognized mutations. Results The renal disease in these patients resulted from monoallelic mutations in the gene encoding glycine amidinotransferase (GATM), a renal proximal tubular enzyme in the creatine biosynthetic pathway that is otherwise associated with a recessive disorder of creatine deficiency. In silico analysis showed that the particular GATM mutations, identified in 28 members of the five families, create an additional interaction interface within the GATM protein and likely cause the linear aggregation of GATM observed in patient biopsy specimens and cultured proximal tubule cells. GATM aggregates-containing mitochondria were elongated and associated with increased ROS production, activation of the NLRP3 inflammasome, enhanced expression of the profibrotic cytokine IL-18, and increased cell death. Conclusions In this novel genetic disorder, fully penetrant heterozygous missense mutations in GATM trigger intramitochondrial fibrillary deposition of GATM and lead to elongated and abnormal mitochondria. We speculate that this renal proximal tubular mitochondrial pathology initiates a response from the inflammasome, with subsequent development of kidney fibrosis.
Neurologist–patient communication about epilepsy in the United States, Spain, and Germany
Stern, John M. , Cendes, Fernando , Gilliam, Frank , Kwan, Patrick , Ryvlin, Philippe , Sirven, Joseph I , Smith, Brien, Adomas, Aleksandra, Sirven, Joseph, Walter, Lauren, Ryvlin, Philippe , Cendes, Fernando , Walter, Lauren A. , Stern, John M

Neurology Clinical Practice | April 9, 2018 | Volume: 8 | Issue: 2 | Pages: 93-101

10.1212/cpj.0000000000000442 | PMID 29708182 Get It

Body temperatures of very low birth weight infants on admission to a neonatal intensive care unit
O’Brien, Emily A., Colaizy, Tarah T. , Cress, Gretchen A. , Johnson, Karen, Klein, Jonathan M. , Bell, Edward F. , Brumbaugh, Jane E.

The Journal of Maternal-Fetal & Neonatal Medicine | February 26, 2018 | Volume: 32 | Issue: 16 | Pages: 2763-2766

10.1080/14767058.2018.1446076 | PMID 29478358 Get It