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Copland, John A.

https://orcid.org/0000-0001-5091-6242

Mayo Clinic

Mayo Clinic in Florida

Citations 116

CLO19-026: Determining the Treatment Decision of Tumors With Mixed Response
Baldeo, Candice , Kaleem, Tasneem , Paz‐Fumagalli, Ricardo , Copland, John A. , Menefee, Michael E.

Journal of the National Comprehensive Cancer Network | March 26, 2019 | Volume: 17 | Issue: 3.5 | Pages: CLO19-026

10.6004/jnccn.2018.7244 Get It

Introduction: Individuals receiving systemic anticancer therapies for advanced solid tumors routinely undergo imaging studies to assess the efficacy of the treatment. Mixed response (MR) to cancer therapy is a common but poorly described phenomenon. There is a paucity of data regarding both the incidence and possible mechanisms of this clinical quandary. Potential etiologies include tumor heterogeneity, differences in tumor microenvironment, and discrepancies in drug delivery to different tumor deposits. It is also possible that MR simply reflects differences in the rate of resistance emerging. MR represents a therapeutic dilemma for the clinician. Methods: Mixed tumor response was defined as: One tumor decreasing in size; one tumor increasing in size (classified as RECIST response/progressions), One tumor stable; another tumor progressing, One tumor stable; another tumor responding, New tumor; another tumor responding or remaining stable. Between 2015 and 2017, 120 restaging CT scans were reviewed of patients who had received at least 1 line of therapy for advanced cancer diagnosis which showed MR; hematologic malignancies were excluded. Charts were reviewed to determine the clinical decision that was made at the time of the MR. Results: A total of 120 scans with MR were reviewed from various solid tumor diagnoses. 38 scans were excluded due to loss of follow-up or death. Of the remaining 82 scans, therapy was switched in 30, the same therapy was continued in 50, and an additional agent was added to the current treatment in 2 cases (Table). Of the patients in which treatment was switched, 20% (6/30) showed response to treatment on the following scan. Of the cases that were kept on current treatment, none showed response on the following restaging scan which was done 6–8 weeks later. There were 4 (10%) deaths prior to the next scan in the group that had treatment switched and similarly 5 deaths (10%) prior to the next scan in the group in which treatment remained the same. Conclusion: MR is associated with a poor prognosis, irrespective of treatment decisions. These data are retrospective and our sample size is small, so definitive conclusions cannot be drawn. However, changing therapy when a MR is observed may be of benefit to some patients. A prospective evaluation to more accurately describe and understand the MR phenomenon is warranted.
Comprehensive Genetic Characterization of Human Thyroid Cancer Cell Lines: A Validated Panel for Preclinical Studies
Landa, Iñigo , Korch, Christopher , Smallridge, Robert C., Copland, John A. , Henderson, Ying C. , Lai, Stephen Y. , Clayman, Gary L. , Onoda, Naoyoshi , Tan, Aik Choon , García-Rendueles, María E.R. , Knauf, Jeffrey A. , Haugen, Bryan R. , Schweppe, Rebecca E. , Marlow, Laura A. , Knauf, Jeffrey A , Schweppe, Rebecca E , Tan, Aik Choon , Pozdeyev, Nikita V. , Fagin, James A.

Clinical Cancer Research | February 8, 2019 | Volume: 25 | Issue: 10 | Pages: 3141-3151

10.1158/1078-0432.ccr-18-2953 Get It

Abstract Purpose: Thyroid cancer cell lines are valuable models but have been neglected in pancancer genomic studies. Moreover, their misidentification has been a significant problem. We aim to provide a validated dataset for thyroid cancer researchers. Experimental Design: We performed next-generation sequencing (NGS) and analyzed the transcriptome of 60 authenticated thyroid cell lines and compared our findings with the known genomic defects in human thyroid cancers. Results: Unsupervised transcriptomic analysis showed that 94% of thyroid cell lines clustered distinctly from other lineages. Thyroid cancer cell line mutations recapitulate those found in primary tumors (e.g., BRAF, RAS, or gene fusions). Mutations in the TERT promoter (83%) and TP53 (71%) were highly prevalent. There were frequent alterations in PTEN, PIK3CA, and of members of the SWI/SNF chromatin remodeling complex, mismatch repair, cell-cycle checkpoint, and histone methyl- and acetyltransferase functional groups. Copy number alterations (CNA) were more prevalent in cell lines derived from advanced versus differentiated cancers, as reported in primary tumors, although the precise CNAs were only partially recapitulated. Transcriptomic analysis showed that all cell lines were profoundly dedifferentiated, regardless of their derivation, making them good models for advanced disease. However, they maintained the BRAFV600E versus RAS-dependent consequences on MAPK transcriptional output, which correlated with differential sensitivity to MEK inhibitors. Paired primary tumor-cell line samples showed high concordance of mutations. Complete loss of p53 function in TP53 heterozygous tumors was the most prominent event selected during in vitro immortalization. Conclusions: This cell line resource will help inform future preclinical studies exploring tumor-specific dependencies.
Pomalidomide Alters Pancreatic Macrophage Populations to Generate an Immune-Responsive Environment at Precancerous and Cancerous Lesions
Bastea, Ligia I. , Liou, Geou‐Yarh , Pandey, Veethika , Martinez, Alicia K. Fleming , Roemeling, Christina A. Von , Doeppler, Heike, Qiu, Yushi, Edenfield, Brandy , Copland, John A. , Störz, Peter , Fleming, Alicia K, von Roemeling, Christina A , Tun, Han W. , Liou, Geou-Yarh , Bastea, Ligia , Döppler, Heike, Li, Zhimin

Cancer Research | January 29, 2019 | Volume: 79 | Issue: 7 | Pages: 1535-1548

10.1158/0008-5472.can-18-1153 Get It

Abstract During development of pancreatic cancer, alternatively activated macrophages contribute to fibrogenesis, pancreatic intraepithelial neoplasia (PanIN) lesion growth, and generation of an immunosuppressive environment. Here, we show that the immunomodulatory agent pomalidomide depletes pancreatic lesion areas of alternatively activated macrophage populations. Pomalidomide treatment resulted in downregulation of interferon regulatory factor 4, a transcription factor for M2 macrophage polarization. Pomalidomide-induced absence of alternatively activated macrophages led to a decrease in fibrosis at PanIN lesions and in syngeneic tumors; this was due to generation of an inflammatory, immune-responsive environment with increased expression of IL1α and presence of activated (IFNγ-positive) CD4+ and CD8+ T-cell populations. Our results indicate that pomalidomide could be used to decrease fibrogenesis in pancreatic cancer and may be ideal as a combination treatment with chemotherapeutic drugs or other immunotherapies. Significance: These findings reveal new insights into how macrophage populations within the pancreatic cancer microenvironment can be modulated, providing the means to turn the microenvironment from immunosuppressive to immune-responsive.
Patient-derived xenografts from breast cancer patients before and after neoadjuvant chemotherapy: A prospective study.
Yu, Jia , Gao, Bowen , Moyer, Ann M. , Visscher, Daniel W., Conners, Amy Lynn , Dockter, Travis , Jones, Katie N., McLaughlin, Sarah A. , Copland, John A. , Moreno‐Aspitia, Alvaro , Northfelt, Donald W. , Gray, Richard J. , Weinshilboum, Richard M. , Wang, Liewei , Boughey, Judy C. , Yin, Ping , Sinnwell, Jason P. , Kalari, Krishna R. , Suman, Vera J. , Weinshilboum, Richard M. , Goetz, Matthew P.

Journal of Clinical Oncology | January 3, 2019 | Volume: 32 | Issue: 15_suppl | Pages: 11130-11130

10.1200/jco.2014.32.15_suppl.11130 Get It

Phase I clinical trial on pomalidomide and dexamethasone in treating patients with relapsed/refractory primary central nervous system lymphoma (PCNSL) or primary vitreoretinal lymphoma (PVRL).
Johnston, Patrick B. , Reeder, Craig B. , Omuro, Antonio Marcilio Padula , Menke, David M. , Copland, John A. , Tun, Han W. , Grommes, Christian , DeAngelis, Lisa M. , Witzig, Thomas E.

Journal of Clinical Oncology | September 6, 2018 | Volume: 35 | Issue: 15_suppl | Pages: 7516-7516

10.1200/jco.2017.35.15_suppl.7516 Get It

7516 Background: PCNSL is a diffuse large B cell lymphoma confined to the CNS. Pomalidomide (POM) is a novel immunomodulatory agent with excellent CNS penetration (~40%) based on CNS PK analysis in rats and pre-clinical therapeutic activity against CNS lymphoma. Methods: A Phase I clinical trial was undertaken to determine the maximal tolerated dose (MTD) of POM, safety profile and overall response rate (ORR). Treatment consists of POM daily for 21 days every 28 days in combination with dexamethasone 40 mg PO weekly for two cycles followed by POM alone in subsequent cycles until progression or intolerance. 4 dose escalation levels of POM (3mg, 5mg, 7mg, and 10 mg) were planned. Thromboprophylaxis with oral anticoagulant or aspirin was required. MTD determination has been completed and expansion of the MTD cohort is ongoing. Therapeutic responses were evaluated per the international PCNSL collaborative group (IPCG) criteria after 2 cycles of treatment. The trial is registered with ClinicalTrials.gov (#NCT01722305). Results: 21 of 25 patients accrued were eligible for assessment. The MTD was determined to be 5 mg qd for 21 days every 28 days. Two DLTs were seen at dose level 3 (Grade 3 dyspnea and grade 4 thrombocytopenia). One DLT was seen in the expanded MTD cohort (Grade 4 neutropenia and lymphocytopenia). ORR for the study (9/21) was 43% (95% CI- 22%, 66%) with 4 CR, 1 CRu and 4 PR. 3 responders completed 2, 4, and 6 cycles before progression. 6 responders have completed 4, 5, 6, 10, 12, and 32 cycles and remain on treatment. ORR for the MTD dose level was (5/12) 42% (95% CI- 15%, 72%) with 3 CR and 2 PR. 2 patients had stable disease (SD). Pseudo-progression was seen in 1 patient. Overall, grade 3/4 toxicity was hematologic (neutropenia, anemia, and thrombocytopenia) in 38.1% and non-hematologic in 33.3% (fatigue, pneumonia, sepsis, syncope, dyspnea, hypoxia, respiratory failure and maculo-papular rash). Percent CSF/blood ratio of POM was determined to be 19% in 1 patient. Conclusions: Pomalidomide treatment is feasible with therapeutic activity against relapsed/refractory PCNSL and should be further developed. Clinical trial information: NCT01722305.
Patient derived renal cell carcinoma xenografts exhibit distinct sensitivity patterns in response to antiangiogenic therapy and constitute a suitable tool for biomarker development
Klingner, Kerstin, Bug, Daniel, Zoeller, Caren, Maier, Armin, Dong, Meng , Willecke, Kerstin, Steiner, Eva, Landesfeind, Manuel, Copland, John A. , Siegers, Gabrielle M. , Haferkamp, Axel, Böehm, Katharina , Schneider, Meike , Schüler, Julia B. , Peille, Anne-Lise , Tsaur, Igor

Oncotarget | July 24, 2018 | Volume: 9 | Issue: 57 | Pages: 30946-30961

10.18632/oncotarget.25697 Get It

Combined alkylation and histone deacetylase inhibition with EDO-S101 has significant therapeutic activity against brain tumors in preclinical models
Qiu, Yushi, Li, Zhimin , Copland, John A. , Mehrling, Thomas , Tun, Han W.

Oncotarget | June 15, 2018 | Volume: 9 | Issue: 46 | Pages: 28155-28164

10.18632/oncotarget.25588 Get It

Methodology, Criteria, and Characterization of Patient-Matched Thyroid Cell Lines and Patient-Derived Tumor Xenografts
Rohl, Stephen D., Miller, James L. , Knauf, Jeffrey A. , Ryder, Mabel , Milosevic, Dragana , Netzel, Brian C., Grebe, Stefan K., Smallridge, Robert C., Copland, John A. , Marlow, Laura A. , Knauf, Jeffrey A , Fagin, James A. , Reddi, Honey V. , Ryder, Mabel

The Journal of Clinical Endocrinology & Metabolism | May 25, 2018 | Volume: 103 | Issue: 9 | Pages: 3169-3182

10.1210/jc.2017-01845 Get It

Diagnostic and prognostic biomarker potential of kallikrein family genes in different cancer types
Tailor, Prashant D. , Kodeboyina, Sai Karthik, Bai, Shan, Patel, Nikhil , Sharma, Shruti , Ratnani, Akshay, Copland, John A. , She, Jin‐Xiong , Sharma, Ashok , Tailor, Prashant D

Oncotarget | April 2, 2018 | Volume: 9 | Issue: 25 | Pages: 17876-17888

10.18632/oncotarget.24947 Get It

Cytokeratin-8 in Anaplastic Thyroid Carcinoma: More Than a Simple Structural Cytoskeletal Protein
Guo, Dehuang, Xu, Qinqin , Pabla, Sarabjot , Koomen, John M. , Biddinger, Paul D. , Sharma, Ashok , Pabla, Simarjot, Pacholczyk, Rafał , Chang, Chien‐Chung , Friedrich, Kevin, Mohammed, Kamran, Smallridge, Robert C., Copland, John A. , She, Jin-Xiong, Koomen, John , Weinberger, Paul

International Journal of Molecular Sciences | February 14, 2018 | Volume: 19 | Issue: 2 | Pages: 577

10.3390/ijms19020577 Get It

Anaplastic thyroid carcinoma (ATC) is almost universally fatal. Elevated keratin-8 (KRT8) protein expression is an established diagnostic cancer biomarker in several epithelial cancers (but not ATC). Several keratins, including KRT8, have been suggested to have a role in cell biology beyond that of structural cytoskeletal proteins. Here, we provide evidence that KRT8 plays a direct role in the growth of ATCs. Genomic and transcriptomic analysis of >5000 patients demonstrates that KRT8 mutation and copy number amplification are frequently evident in epithelial-derived cancers. Carcinomas arising from diverse tissues exhibit KRT8 mRNA and protein overexpression when compared to normal tissue levels. Similarly, in a panel of patient-derived ATC cell lines and patient tumors, KRT8 expression shows a similar pattern. sh-RNA-mediated KRT8 knockdown in these cell lines increases apoptosis, whereas forced overexpression of KRT8 confers resistance to apoptosis under peroxide-induced cell stress conditions. We further show that KRT8 protein binds to annexin A2, a protein known to mediate apoptosis as well as the redox pathway.