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Ramirez-Alvarado, Marina

0000-0003-2325-6773

Mayo Clinic

Department of Biochemistry and Molecular Biology, Mayo Clinic, Rochester, MN, USA.

Citations 25

Serum immunoglobulin free light-chain measurement in primary amyloidosis: prognostic value and correlations with clinical features
Kumar, Shaji , Dispenzieri, Angela , Katzmann, Jerry A., Colby, Colin , Lacy, Martha Q. , Hayman, Suzanne R. , Leung, Nelson , Zeldenrust, Steve R., Ramı́rez-Alvarado, Marina , Clark, Raynell, Kyle, Robert A. , Rajkumar, S. Vincent , Larson, Dirk R. , Buadi, Francis K. , Zeldenrust, Steven R., Gertz, Morie A. , Rajkumar, S Vincent , Leung, Nelson , Dispenzieri, Angela , Ramirez-Alvarado, Marina

Blood | August 26, 2010 | Volume: 116 | Issue: 24 | Pages: 5126-5129

10.1182/blood-2010-06-290668 Get It

Abstract Immunoglobulin free light chains (FLCs) are the precursors of amyloid fibrils in primary amyloidosis (AL). We studied the relationship between FLC levels and clinical features in 730 patients with newly diagnosed AL. The plasma cell clone was λ in 72% patients, and κ in 28% patients. κ-AL had more GI tract and liver involvement, where as renal involvement was more with λ-AL. While the overall survival (OS) was similar for κ and λ-AL, the median OS for those without an identifiable serum heavy chain was significantly shorter (12.6 vs 29.9 months; P = .02). The OS was shorter among those with a higher dFLC (involved FLC−uninvolved FLC; κ > 29.4 mg/dL or λ > 18.2 mg/dL using median for cutoff); 10.9 vs 37.1 months; P < .001. In multivariate analysis, dFLC was independent of other prognostic factors. The type of light chain impacts the spectrum of organ involvement and the FLC burden correlates with survival in AL.
The Pneumocystis Meiotic PCRan1p Kinase Exhibits Unique Temperature-Regulated Activity
Burgess, Joshua W., Villegas, Leah R., Lamont, Jeffrey D., Baden, Elizabeth M., Ramı́rez-Alvarado, Marina , Kottom, Theodore J. , Limper, Andrew H. , Ramirez-Alvarado, Marina

American Journal of Respiratory Cell and Molecular Biology | March 13, 2009 | Volume: 41 | Issue: 6 | Pages: 714-721

10.1165/rcmb.2008-0098oc Get It

Abstract Pneumocystis organisms are opportunistic fungal pathogens that cause significant pneumonia in immune-compromised hosts. Recent evidence has suggested that Pneumocystis carinii exists as separate mating types, and expresses and regulates proteins that govern meiosis and progression of the life cycle. This study was undertaken to investigate the activity of three life cycle–regulatory proteins in Pneumocystis, including two proteins essential in mating signaling, and a putative meiotic regulator, to determine the conditions under which they are most active. This study used V5/HIS-tagged PCRan1p, PCSte20p, and PCCbk1, purified from Saccharomyces cerevisiae strain, INVSC, as well as an in vitro Escherichia coli protein expression system to determine the optimal expression conditions of each protein in the presence of varying pH, temperature, and metal ions. These studies demonstrate an atypical enzymatic activity in PCRan1p, whereby the kinase was most active in the environmental conditions between 10 and 25°C, compared with a dramatic reduction in activity above 30°C, temperatures typically found within mammalian hosts. Circular dichroism and fluorescence spectroscopy suggest that PCRan1p becomes partially unfolded at 25°C, leading to its most active conformation, whereas continued unfolding as temperature increases results in strongly suppressed activity. These studies suggest that, in vivo, while under conditions within the mammalian lung (typically 37°C), PCRan1p kinase activity is largely suppressed, allowing better conditions for the activation of meiosis, whereas in ex vivo environments, PCRan1p kinase activity increases to arrest progression of the life cycle until conditions become more favorable.
Biologic and genetic characterization of the novel amyloidogenic lambda light chain–secreting human cell lines, ALMC-1 and ALMC-2
Arendt, Bonnie K., Ramı́rez-Alvarado, Marina , Sikkink, Laura A., Keats, Jonathan J. , Ahmann, Gregory , Dispenzieri, Angela , Fonseca, Rafaël , Ketterling, Rhett P. , Knudson, Ryan A., Mulvihill, Erin M., Tschumper, Renee C. , Wu, Xiaosheng , Zeldenrust, Steven R., Jelinek, Diane F., Dispenzieri, Angela , Ramirez-Alvarado, Marina , Ketterling, Rhett P , Keats, Jonathan J , Fonseca, Rafael

Blood | June 21, 2008 | Volume: 112 | Issue: 5 | Pages: 1931-1941

10.1182/blood-2008-03-143040 Get It

AbstractPrimary systemic amyloidosis (AL) is a rare monoclonal plasma cell (PC) disorder characterized by the deposition of misfolded immunoglobulin (Ig) light chains (LC) in vital organs throughout the body. To our knowledge, no cell lines have ever been established from AL patients. Here we describe the establishment of the ALMC-1 and ALMC-2 cell lines from an AL patient. Both cell lines exhibit a PC phenotype and display cytokine-dependent growth. Using a comprehensive genetic approach, we established the genetic relationship between the cell lines and the primary patient cells, and we were also able to identify new genetic changes accompanying tumor progression that may explain the natural history of this patient's disease. Importantly, we demonstrate that free lambda LC secreted by both cell lines contained a beta structure and formed amyloid fibrils. Despite absolute Ig LC variable gene sequence identity, the proteins show differences in amyloid formation kinetics that are abolished by the presence of Na2SO4. The formation of amyloid fibrils from these naturally secreting human LC cell lines is unprecedented. Moreover, these cell lines will provide an invaluable tool to better understand AL, from the combined perspectives of amyloidogenic protein structure and amyloid formation, genetics, and cell biology.
RNA−p53 Interactions in Vitro
Riley, Kasandra , Ramı́rez-Alvarado, Marina , Maher, L. James, Ramirez-Alvarado, Marina

Biochemistry | February 9, 2007 | Volume: 46 | Issue: 9 | Pages: 2480-2487

10.1021/bi061480v Get It

Human thiopurine S -methyltransferase pharmacogenetics: Variant allozyme misfolding and aggresome formation
Wang, Liewei , McLaughlin, Richard William , Sikkink, Laura A., Ramı́rez-Alvarado, Marina , Weinshilboum, Richard M., Nguyen, Tien V. , Ramirez-Alvarado, Marina

Proceedings of the National Academy of Sciences | June 21, 2005 | Volume: 102 | Issue: 26 | Pages: 9394-9399

10.1073/pnas.0502352102 Get It

Thiopurine S -methyltransferase (TPMT) catalyzes the S-methylation of thiopurine drugs. TPMT genetic polymorphisms represent a striking example of the potential clinical value of pharmacogenetics. Subjects homozygous for TPMT * 3A , the most common variant allele for low activity, an allele that encodes a protein with two changes in amino acid sequence, are at greatly increased risk for life-threatening toxicity when treated with standard doses of thiopurines. These subjects have virtually undetectable levels of TPMT protein. In this study, we tested the hypothesis that TPMT * 3A might result in protein misfolding and aggregation. We observed that TPMT * 3A forms aggresomes in cultured cells and that it aggregates in vitro , functional mechanisms not previously described in pharmacogenetics. Furthermore, there was a correlation among TPMT half-life values in rabbit reticulocyte lysate, aggresome formation in COS-1 cells, and protein aggregation in vitro for the three variant allozymes encoded by alleles that include the two TPMT * 3A single-nucleotide polymorphisms. These observations were compatible with a common structural explanation for all of these effects, a conclusion supported by size-exclusion chromatography and CD spectroscopy. The results of these experiments provide insight into a unique pharmacogenetic mechanism by which common polymorphisms affect TPMT protein function and, as a result, therapeutic response to thiopurine drugs.