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Ocorr, Karen

https://orcid.org/0000-0003-2593-0119

Mayo Clinic

Sanford Burnham Prebys Medical Discovery Institute

Citations 11

Patient-specific genomics and cross-species functional analysis implicate LRP2 in hypoplastic left heart syndrome
Theis, Jeanne L. , Vogler, Georg , Missinato, Maria A , Li, Xing , Nielsen, Tanja , Zeng, Xin-Xin I. , Martinez‐Fernandez, Almudena , Walls, Stanley M. , Kervadec, Anaïs , Kezos, James , Birker, Katja , Evans, Jared M., O’Byrne, Megan M., Grossfeld, Paul , Ocorr, Karen , Nelson, Timothy J., Olson, Timothy M. , Colas, Alexandre R. , Bodmer, Rolf , Fogarty, Zachary C , Bodmer, Rolf , Theis, Jeanne L , Missinato, Maria A , Ocorr, Karen , Olson, Timothy M , Vogler, Georg , Fogarty, Zachary C. , Terzic, André , Nelson, Timothy J.

eLife | October 2, 2020 | Volume: 9 | Issue: No issue available | Pages: No page available

10.7554/elife.59554 Get It

Congenital heart diseases (CHDs), including hypoplastic left heart syndrome (HLHS), are genetically complex and poorly understood. Here, a multidisciplinary platform was established to functionally evaluate novel CHD gene candidates, based on whole-genome and iPSC RNA sequencing of a HLHS family-trio. Filtering for rare variants and altered expression in proband iPSCs prioritized 10 candidates. siRNA/RNAi-mediated knockdown in healthy human iPSC-derived cardiomyocytes (hiPSC-CM) and in developing Drosophila and zebrafish hearts revealed that LDL receptor-related protein LRP2 is required for cardiomyocyte proliferation and differentiation. Consistent with hypoplastic heart defects, compared to parents the proband’s iPSC-CMs exhibited reduced proliferation. Interestingly, rare, predicted-damaging LRP2 variants were enriched in a HLHS cohort; however, understanding their contribution to HLHS requires further investigation. Collectively, we have established a multi-species high-throughput platform to rapidly evaluate candidate genes and their interactions during heart development, which are crucial first steps toward deciphering oligogenic underpinnings of CHDs, including hypoplastic left hearts.